Array 1 1039-1786 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRBE01000028.1 Pseudomonas aeruginosa strain env068 NODE_28_length_49704_cov_10.644, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1039 28 100.0 32 ............................ ATCCTGGGTGGACAGCTGCAAGACTTGGTGAT 1099 28 100.0 32 ............................ GATTGAGAAATGCCGGTTCTTCGAACAGACGC 1159 28 100.0 32 ............................ AGGGGGTCAGAGGGCAGGGGGAGAAAAGCTTC 1219 28 100.0 32 ............................ GCCGAGGGCGACGAAACTTTCTTATCAAAATA 1279 28 100.0 32 ............................ AGTGCGCAAGCTGGTCGGCAAGCACATCAACT 1339 28 100.0 32 ............................ GACGAGAACGAAACGCTGGCCGCGTAACGACA 1399 28 100.0 32 ............................ ATCAGCAGCATATCGACCTCAAGCGGGATATT 1459 28 100.0 32 ............................ AGTCTGATCAAGGCCAACCCCAATTATGGAAT 1519 28 100.0 32 ............................ CGGGTAAACCAGGCGACCGGCTTTCTCTCCCC 1579 28 100.0 32 ............................ ATGCGCAGGAGTTCGAAGGTCTTCATTTCGCA 1639 28 100.0 32 ............................ TGGCCGCAGGCGAGCAGGTCAGCCGGGGCCAT 1699 28 100.0 32 ............................ CCCAGACTCTCAATCATCACGTCATTGCGCGC 1759 28 96.4 0 ...........A................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 99.7 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCAAAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCTACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 12070-10661 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRBE01000028.1 Pseudomonas aeruginosa strain env068 NODE_28_length_49704_cov_10.644, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12069 28 100.0 32 ............................ TCGTTGACCCGCTGGCGCCAGAGCATTTCGCG 12009 28 100.0 32 ............................ ACAACGTGCGCGAAGTCTCCCGCACCTTCGAC 11949 28 100.0 32 ............................ ATATGAGGCCTGCTAGCGGTTAGAAGCAGCAT 11889 28 100.0 32 ............................ TATGCGCCAGGCCGCGTGCTTGTGTGCGGCCA 11829 28 100.0 32 ............................ AAGCGGAGATCCAGTCGCTGGAGGCGCTGCGC 11769 28 100.0 32 ............................ AATTCGGCGCTGAGCTGATTCGTCACCTGGCT 11709 28 100.0 32 ............................ CACGCGAAGGGCCGCGACCCGTATAACGTCGA 11649 28 100.0 32 ............................ GAGAACGATTCCGTCTTGTTGGAGCTTTCTGT 11589 28 100.0 32 ............................ CGACGAGCAACTGCGCTTGCGCGTGCGTAACC 11529 28 100.0 32 ............................ GGAAGGCTGGCGCTCGAACGGATGTGTACAGG 11469 28 100.0 32 ............................ TCCGGATCACCAGGGCGACAGATGGCCACCTC 11409 28 100.0 33 ............................ CTCTGGCGGTAACCTTCCATGATCTGCGCAGCC 11348 28 100.0 32 ............................ TGCATGCACATCGGCGAACTGCTGACGTGCTT 11288 28 100.0 32 ............................ TGGCGCCGCCCGATTTCACGTAGCTGCTCGAT 11228 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCGCTGGCGG 11168 28 100.0 32 ............................ TGATTTCGAAGGCCGCGGGCGACTGATCCGGA 11108 28 100.0 32 ............................ TGGATCAAAGAACGCATTCTCGGCACGTCGAA 11048 28 100.0 32 ............................ TCCTTGCCGGGCGCGGCGGCGAGCAGTTCGCG 10988 28 100.0 32 ............................ TGTCCGGTCCCGGAAAAGACCAACGCGGGAGT 10928 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 10868 28 100.0 32 ............................ AGCAATGGAAAGCAGCGATGTGACCCGACCCG 10808 28 100.0 32 ............................ TGCAGGTCATAGGCGTATTCGAAGGACAGGCT 10748 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 10688 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 98.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGGCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATAAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 109319-107550 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRBE01000006.1 Pseudomonas aeruginosa strain env068 NODE_6_length_429979_cov_12.319, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 109318 28 100.0 32 ............................ ACCTCGAAAAGATCGCCCAGGAACACGCAGCG 109258 28 100.0 32 ............................ AATTGGAGCTATGAGGAAGAGTATCGAGCACT 109198 28 100.0 32 ............................ CCAGGTGGACGCGGATGCCCTGGTCCGTCTGC 109138 28 100.0 32 ............................ TGCGTAAGAACCGCGAGATCGATGCGCGTCCA 109078 28 100.0 32 ............................ AAGTACAAAGAGAAAGCGCCTCAGATTGAGGC 109018 28 100.0 32 ............................ CTGGCCATTACCGCCATCGGTGACGGCACCAG 108958 28 100.0 33 ............................ GCAAGCGTGATCGCATCCTCAAGCGGGATGGCT 108897 28 100.0 32 ............................ TACGTGGACCAGCTGATTTCGTACTGCAACCA 108837 28 100.0 32 ............................ TTGGGGATGTACGGATGGGCGATCGAGCACGG 108777 28 100.0 32 ............................ AGCAGCACCCCGAGGCCTTCACAAAGATCCAG 108717 28 100.0 32 ............................ GTCTACAGGCCAGCCGTTGCCGGACTCGTAGG 108657 28 100.0 32 ............................ GTCCTCGACCGGGGCGACGGCAATATGCCGCT 108597 28 100.0 32 ............................ TCGCGCTGTTCATGGACGCGCTCGAAACCGTC 108537 28 100.0 32 ............................ AGGAACTCGCGGGCGCCGCCCTGACCGATCAG 108477 28 100.0 32 ............................ TCAGACGGAGCGCTGATGCTGATCCTCAGCGG 108417 28 100.0 32 ............................ CGGAGCGGGGTTCGTTATTGCCGCACCGTAAG 108357 28 100.0 32 ............................ AGGACAGCCCTATCCCAACCGACCAAGGAAAC 108297 28 100.0 32 ............................ TACTCAGACCGAGGTGAACATGGCGACAGAGA 108237 28 100.0 32 ............................ GCGACGAGATCGAGGACGGCGACACTACCCTG 108177 28 100.0 32 ............................ CTTGTCGCGGATGTACGCATCGCCCCAGAGGT 108117 28 100.0 32 ............................ ATGATGGTTTTTCGGTTCTGTCGGACACAGTC 108057 28 100.0 32 ............................ AGGACAGCCCTATCCCAACCGACCAAGGAAAC 107997 28 100.0 32 ............................ TACTCAGACCGAGGTGAACATGGCGACAGAGA 107937 28 100.0 32 ............................ GCGACGAGATCGAGGACGGCGACACTACCCTG 107877 28 100.0 32 ............................ CTTGTCGCGGATGTACGCATCGCCCCAGAGGT 107817 28 100.0 32 ............................ ATGATGGTTTTTCGGTTCTGTCGGACACAGTC 107757 28 100.0 32 ............................ GCGGGAATTTCACGGCGAACAACTCGCCTCTC 107697 28 100.0 32 ............................ GGGGAGGGTTGCGCCAGGGCGGCGCGGGCCTC 107637 28 100.0 32 ............................ TTATGGGCCGCCTGGGCATCGATATGAAGAAC 107577 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 30 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCGATCCCTGGATAAGCGGCGGATAACCGCGAGCGGTTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCTCACTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //