Array 1 191695-193512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBRJ010000004.1 Pediococcus acidilactici strain MSK.2.3 DBLOENMM_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 191695 36 100.0 30 .................................... TATTAATCTCGTCTTGAACTTCTTCAATAG 191761 36 100.0 30 .................................... TCACTAAGTCAATTGCTGGGTACACTCCGG 191827 36 100.0 30 .................................... GGTTATCGTCATCATCATGGAGAAGATATC 191893 36 100.0 30 .................................... TCTGCAAACAAGGAACGTAAGTTAAAATCT 191959 36 100.0 30 .................................... GCCCGAGTTATCTTAGACAACGCTACATTA 192025 36 100.0 30 .................................... AGACGTTTATTACAATGCGCTACGTGTGGC 192091 36 100.0 30 .................................... AAGCATTCTAAATCGCTCGTGCCAATTGTG 192157 36 100.0 30 .................................... AAGTTAGAAGTCTAACGTTATAATAAATAT 192223 36 100.0 30 .................................... CTAAAGTTAATGACGTTCTTGTAAGTCCGG 192289 36 100.0 30 .................................... AAATCACCTAAATCACCTGAGCCATTGACT 192355 36 100.0 30 .................................... AAATCACCTAAATCACCTGAGCCATTGACT 192421 36 100.0 30 .................................... GAAAAACTAGCTAAACAAAACGAAGATTTA 192487 36 100.0 30 .................................... CCGGACAAGCCCGACAACAGCAATAATCAG 192553 36 100.0 30 .................................... GAAAACTTAAATTAATTTAAGTTTATTTAT 192619 36 100.0 30 .................................... TTGGACATACGACACCGCTCACGAAGTTGT 192685 36 100.0 30 .................................... CAAGAAACCGGTGGCATTTATTCGATTGAC 192751 36 100.0 30 .................................... CCAACAGACAGACCCGCAAAGCTTTCCTTT 192817 36 100.0 30 .................................... GGATTATCTTCCGATGTGTCAAGCTCTTCT 192883 36 100.0 30 .................................... CCGCATTGACCATGGGATATCCCACTTTAA 192949 36 100.0 30 .................................... CTTTTGCTCCAAATTCACTCTAACTTCGCT 193015 36 100.0 30 .................................... TACTTGCAACAAGAATTTACCAACGATGAA 193081 36 100.0 30 .................................... TGGTTGCCGGTGTTCCAATCTGATATTTGG 193147 36 100.0 30 .................................... TGGTGTTTTCACCCGGTTTTGGAACACTGT 193213 36 100.0 30 .................................... ACTACAACTTCTACTTCTAAAGAGGTACCA 193279 36 100.0 30 .................................... TAAATTTTCAAGCGCGCCGTTATTGAGTTC 193345 36 100.0 30 .................................... TAGCCATATTCCCTTTTTCTAACTTAATCA 193411 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 193477 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.8 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAATGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAATGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //