Array 1 9297-11416 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUJM01000022.1 Oharaeibacter diazotrophicus strain SM30 scaffold22.1-size22611, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 9297 37 100.0 39 ..................................... AAGGAAGAGCAGCGCCGCGTGTCCAACGCAGTGTCCGGC 9373 37 100.0 36 ..................................... GACCCAGAGGCCGGCGTGGAACTCGTGCACGATGAT 9446 37 100.0 36 ..................................... GCGATCCGCCGAGCGTGGTGGTGCGACTGGATGCCG 9519 37 100.0 37 ..................................... GCCGTCGCCCATCCCGCCAGCTTCGCCACTCCGGCGT 9593 37 100.0 39 ..................................... GACGCCGAATGCCGGGCGCTTTTCCCCGGAACCGAAACC 9669 37 100.0 37 ..................................... GGCCTGCTCTACAGGGTCGTCCGGGTCCAAGTTCCGT 9743 37 100.0 37 ..................................... GGCGAGGCGACCGACGTCGAGATCGAGACCCACCGGC 9817 37 100.0 37 ..................................... CACGTCGCGTCGCACCAGGAGATCGCGGTCGTCTCGG 9891 37 100.0 37 ..................................... GCCGAGGTGACGCCGCCGCCGGAGCCGCCGCCGCCGC 9965 37 100.0 37 ..................................... ACGTGCACGATCGTCGTCGTCCGGGACATGTAGGCGA 10039 37 97.3 36 ...............G..................... CGCGACACGCTGGTGACGCTCGACCGGATGCGCGCC 10112 37 100.0 38 ..................................... GTGCCGATCGTCCGCACGAAGGCCCCCGGGTAGAGATC 10187 37 97.3 39 .........C........................... GCTTTCTCGGTGGTGATGCAGCCGGCCAGCATCAGGCAG 10263 37 100.0 44 ..................................... GCCACGTGGCACACCTGCACCTGCCCCGGTCCCGATCGTGTGCC 10344 37 100.0 36 ..................................... ACTTCCGCGCCGTCACGGGCGAGCTTGATGAACTCG 10417 37 100.0 39 ..................................... GAGGAGACCCACACCGACGAGGGCGGCCAGCCGCTGCGG 10493 37 100.0 37 ..................................... AGCCCGGCCCTGCGCGAATTCATCGCCGGCCGCACGC 10567 37 97.3 37 .........................A........... TGTTCGGCGACGTAGCTCAGCGCCTGGAAAGCCTCGA 10641 37 100.0 36 ..................................... CGCGTCCTGTCGGCGCCCGGGGCCTCGACCTACTAC 10714 36 97.3 36 ...........-......................... ATGTTCTCCTGCCGGCGCTGGTTGAACGCACCGGAG 10786 37 100.0 36 ..................................... CAGTCACGCCCATCAGGTGCGAAATCAACGGAAACC 10859 37 100.0 39 ..................................... CGACAACGACGCCTCGGAAAGCGAGGTCGCACCGCACCA 10935 37 97.3 36 .................................C... ATATTTTCCCGGATTTCCGCGGCGTCGGCCCGCGTC 11008 37 100.0 37 ..................................... ACTTGATCGGCGGTAAGGTCTTGTGCGTCGCCCGTCG 11082 37 100.0 39 ..................................... GACCAGTCCTCGCGCGCGGCGTCGCAGAGGTCCGGCGAG 11158 37 97.3 38 .........................T........... GACTACGGCCGGGGCTACGCCGTCGGCGACTTCACCGA 11233 37 100.0 37 ..................................... GCGTACTCGCGGCCCGCGGCCTCGTCGAACGCCTTGT 11307 37 94.6 37 .C..............................C.... GTCGCGAAGCGCAGGCGGGTGACGCCTTCCGGCAGCA 11381 36 86.5 0 .C............G.........-....G.C..... | ========== ====== ====== ====== ===================================== ============================================ ================== 29 37 98.8 38 CTACTTCCCGGCCCAACGGCCGGGACCTCATTGAAGC # Left flank : CTGGCGGCGCGTCTTCAAGATCATGAAGGGCTACGGCCGCTGGCTGCAGCTCTCCGTCTTCCATTGCCGGCTCGACGGCGGCCGCCGCATCGAGATGGCCGCCGCCCTGGAAGCGTCGATCGACCACGGCAGCGACCACGTCCTCATCCTGGACCTCGGCCCGGCCGACGACGTCGACCTGCAGGTCGAGAGCCTCGGCAAGAGCTTCGCGCCAATCGTGCGCGAGGCGGTGGTGATCTGACGGTCGGCGAGGTCGGGCCGAAATCGGCGGCTGCACCCGCGACCACCGCCTCGCGCTGCGCTACACTCCCGCGAGCGGTCCGTCGCAACCCGAACCGGCGCCAGCGCTCGCACCCGGCCAAACCGTCGAGGTGGATCACGTTCTTTGATATCGTCCAGCTCTGTCGGGCCTCGTCGTACGAACCGGCGACGGCCCTGCCGGCGACCCCTCGCATCTGCACTCGCGAGCCCTTCGTCCCGCAGGGAAAATGCAAGGGGGC # Right flank : CGTCTCGGCCGGGGCTGACGGCATGACGTCGCGGTCGAGCGGGATCGGGCCCCGGCCCGACGGCTCGAGACGTCCAGGCGACGGGGGGGCCGCGACGATCTGCGGCGGTTCGGTGGTCCGTGCGACCGTACGGGGGCCGAGGCGGGCGGCCGGAAGGGCCGTGTCGAACCGCCGTCGTCGCCGACCCGATCGTCGTTTTGCAGAGGGAGAGGGGTGGTACAGCTGGCTGGGCTTGAACCAGCGACCTTCGGAGCCACAATCCGCAATTTCGATCATATTATCAGATAGTTGAAAAAGCAGCCTGCGTCAAACCAGCTACTGACCATCAATGACTTACGGGCGATTTGTCAAACCCGCCGACGGATCGCACGGCAATTGCTCGGGCTTCCTCCAGACACTCGAGCACATCGAATCGACTATCACCAAGCATGCATTGGCAGCACTCATCCTCAAGGGGAAAATTTCACTCTTGCGTATATTGTCATTTAATCGCAAAGCAG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTACTTCCCGGCCCAACGGCCGGGACCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-17.00,-18.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 891-302 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUJM01000065.1 Oharaeibacter diazotrophicus strain SM30 scaffold65.1-size27952, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 890 37 97.3 31 .............................C....... TCTTCGCGGGTCAGGATCAGTGGGCATTCTA 822 37 100.0 32 ..................................... GCTTCGAGGACCATCTCGCCCACTTCGGTGAT 753 37 100.0 32 ..................................... TTGTTGCCGGCCGCCAGGATGTAGGTGGCCAT 684 37 97.3 33 ..A.................................. GTCGAGGCTCTGCGCCGCGATGCCACTCTGGGG 614 37 100.0 33 ..................................... TATCCGAACCTCTCCATGAGACTCTTGACCAGA 544 37 94.6 32 ....................T......A......... ACGGGCATTCGTCAGATCGAAATGCATGATGT 475 37 97.3 32 ...........T......................... GGCACCGGCGGCACATAGCCGGGCAGGGCCTC 406 37 91.9 31 ...........T..G.T.................... GCCACGCCTTGGCGATACCGGGGAAGTCGAC 338 37 91.9 0 ...........TA.....A.................. | ========== ====== ====== ====== ===================================== ================================= ================== 9 37 96.7 32 ATGCTCGTCCGGGTTCCGCTCGAACGCGGATTGAGAC # Left flank : GCCCTCACGCTCGCGGACGCGATGGATCTCGGCGATCGCCTGCGCCGTGCCCACGCGCCCTACATCGACATCCGGGAGAACCATCCCGATCGCGTGCCGTTGGCCATAGCGCCGCGGGAGGTGACCTACGTCGACGGCAACGGCGAGACGCTGCTGCGCTGGCGACCCGACACCGACCTCCGCGACCCCGACGGCAGCCGAGCACCGACAGGCGCGCGGGTGCCGCTGCGTCGCAAGCTGCGCGAGATGCCCGACGGCGAGCGCAAGGTACCGCCGTTCCGGCACTGGTCGTTCCTGCTCGGCGACGAGTCTTTCCGGCGCGGCGATGGCGGACGGCTGGCCTGGAAGATCGCGCCGGCGCGCGCACAGGGACTGACGTGGCGGCATTTCAGCGACGACAGGTTGCCGCTGCTCGCCACCATCGAGCTGGCCGATCCCGCGGACCATCATCTCGAACGCGGATTGAGACCGCCCTGTATAAAGGAGCCCCCTTGGCCATA # Right flank : CCCCGTGGCGAGCGGAGCAGCCGTCTGCGCCACATTCCATGCTCGACCCAACTCCACGCGAACCTGAGAGACCGACCCTCGCCCCTTCGGCTCGTCGGCACTTCGCAAGACCTTTGCCGATGGAGTGCTTTCGAGGGATTCCGACGGCCGCGCCCCGGTCGGCTCGATCGGGCTCGGCTCTCCCGAGTTCCGCCGTAGGCGGAGAATCGGGCCGGCAGGCGCCGCGGCCGCCCCGTGCCGCGCACGGCCGCCGGAACGGGGCCGTCGGGTGGACGGCCTGCCCGCGTCGCGTCCGCGCCCGG # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTCGTCCGGGTTCCGCTCGAACGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //