Array 1 14346-14672 **** Predicted by CRISPRDetect 2.4 *** >NC_019429.1 Anabaena sp. 90 plasmid pANA02, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ==================================== ================== 14346 37 81.6 36 .GA...-G....C.C.G..................... ACTGGAATTGTCTGGCGGTGATTCGACAATGGAAGC 14419 38 100.0 33 ...................................... TCTGATCGTAGACAGCAGTCTCTGATCGTAGAA 14490 38 100.0 34 ...................................... ATTTTATAAAATTGTGCCATTATCCCAACCTTCA 14562 38 97.4 35 T..................................... TAAAAAAGTCAAAAACTAATGGTGAAAATTACCTG 14635 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ==================================== ================== 5 38 95.8 35 AATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Left flank : TCAGTCCGCACTCATTGGGGTATAGAGAATTCATTACACTGGGTTTTAGATGTAGCTTTTAGAGAAGATGATTGTCGGATAAGAAAGGATAATGCACCACAAAACTTTGCAGTTATTCGTCATATAGCAGTTAATCTTTTAGGAAAAGAAAAAAGCCAAAAACTAGGAACTAAAAGTAAGCAGTTTTGTGCAGGATGGGATGATGAATATTTAGAGAAGATTTTAGAATGTATCTGATAAAAATCAGAAAATATAGACAAATATAAATATAACCAATTTATTTTTCTGTTGATTCTACAATAGAATCTATATTTTTGATGCCAAAAAATATAGATATTAATATATAGAACTGAACAAAATAAATCCATCATTAAAAATAAATAATTACTCTAAATTTATGAAATTTTTATAATTTTAATAAAGGAATTTATCAGATTTTGAATGAAGTTAGATATTTTCCCATATTGATGCACTAATATAGTATTCTGTCAAGATAATTT # Right flank : CCACCAAAAGTGGCATTAATATTAGAAAGGTCAAAATTGCAATTTCACTTCAATACTGTAGCCAAAAAAAGAGGATGAAGAGAGAGGGCTGATGTAGTAGAGTTATAGTCTTCCAAAACAAAAACTCGAAAACCACATACAGCCCATGTTTGATATCCTAACACTCCTGCAATGCCTGCTACCAGAAATAAAAGTGACGACTATGCGGCAATTGAGTCAGATCATCATGGCCATGTTAGCAATGAGCGGACGAGTAACGATGTTGGGAATTTCGCGTTGGACGCTTAGTGGTGGTAGTTATCGGACGGTAATCAGATTCTTTCGGACAGTCATACCGTGGGCAACGGTGTTCTGGGTGTTTTTTCGGCGGCATTTGTTTTGCCCAAATGATGTTTATTTGTTGGCAGGAGATGAAGTAGTAATAAGCAAAGCCGGGAAAAAAACCTATGGATTAGATAGGTTCTTCTCAAGTCTAACAAGCAAACCAATATCGGGGCTAT # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.79%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA // Array 2 40243-39917 **** Predicted by CRISPRDetect 2.4 *** >NC_019429.1 Anabaena sp. 90 plasmid pANA02, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 40242 36 81.1 37 GA...G-....C.C.G..................... ACTGGAATTGTCTGGCGGTGATTCGACAATGGAAGCA 40169 37 100.0 34 ..................................... TCTGATCGTAGACAGCAGTCTCTGATCGTAGAAA 40098 37 100.0 35 ..................................... ATTTTATAAAATTGTGCCATTATCCCAACCTTCAT 40026 37 100.0 36 ..................................... TAAAAAAGTCAAAAACTAATGGTGAAAATTACCTGA 39953 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 96.2 36 ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Left flank : CAGTCCGCACTCATTGGGGTATAGAGAATTCATTACACTGGGTTTTAGATGTAGCTTTTAGAGAAGATGATTGTCGGATAAGAAAGGATAATGCACCACAAAACTTTGCAGTTATTCGTCATATAGCAGTTAATCTTTTAGGAAAAGAAAAAAGCCAAAAACTAGGAACTAAAAGTAAGCAGTTTTGTGCAGGATGGGATGATGAATATTTAGAGAAGATTTTAGAATGTATCTGATAAAAATCAGAAAATATAGACAAATATAAATATAACCAATTTATTTTTCTGTTGATTCTACAATAGAATCTATATTTTTGATGCCAAAAAATATAGATATTAATATATAGAACTGAACAAAATAAATCCATCATTAAAAATAAATAATTACTCTAAATTTATGAAATTTTTATAATTTTAATAAAGGAATTTATCAGATTTTGAATGAAGTTAGATATTTTCCCATATTGATGCACTAATATAGTATTCTGTCAAGATAATTTA # Right flank : CACCAAAAGTGGCATTAATATTAGAAAGGTCAAAATTGCAATTTCACTTCAATACTGTAGCCAAAAAAAGAGGATGAAGAGAGAGGGCTGATGTAGTAGAGTTATAGTCTTCCAAAACAAAAACTCGAAAACCACATACAGCCCATGTTTGATATCCTAACACTCCTGCAATGCCTGCTACCAGAAATAAAAGTGACGACTATGCGGCAATTGAGTCAGATCATCATGGCCATGTTAGCAATGAGCGGACGAGTAACGATGTTGGGAATTTCGCGTTGGACGCTTAGTGGTGGTAGTTATCGGACGGTAATCAGATTCTTTCGGACAGTCATACCGTGGGCAACGGTGTTCTGGGTGTTTTTTCGGCGGCATTTGTTTTGCCCAAATGATGTTTATTTGTTGGCAGGAGATGAAGTAGTAATAAGCAAAGCCGGGAAAAAAACCTATGGATTAGATAGGTTCTTCTCAAGTCTAACAAGCAAACCAATATCGGGGCTATC # Questionable array : NO Score: 8.87 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 2150044-2150428 **** Predicted by CRISPRDetect 2.4 *** >NC_019427.1 Anabaena sp. 90 chromosome chANA01, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ============================================================================================================================================================================ ================== 2150044 38 79.5 172 .........CT.TA......C..C.-......G...... TGCAGCAAGAATTAAATATTACATCTATAAATATTACTCAATTCGTCAAAACCTGAATACTCATATCCTCAACAACTTTAAGACGTTGAGCATTTCGTGATGAAGTGTAACTAATTTAGCCAGAAAATTGAAAATAGCCAAAAATAAATTTATATCTTTATGCCATTTACAG T,C [2150074,2150081] 2150256 39 97.4 28 ...........................C........... ACAACATTGAAGTATTTCTTATTTCCAA 2150323 39 100.0 28 ....................................... GCAACATTCGAGTACATTTTATCTAGAT 2150390 39 97.4 0 ...........C........................... | ========== ====== ====== ====== ======================================= ============================================================================================================================================================================ ================== 4 39 93.6 76 TTTTGTAAATCTCCCTTGTGACAGTATTTAAATAGTCAT # Left flank : CCATACTTCTTGACTCGCAATCTTTGGTCTAACTACAAACCAAGTATTTTCACCATCTAAAATTATTTCATGGGTGTATTGAATGAATGTCCCTAAAGAGGAAGAGTGATAAAAATAAGCGGGTTTTGGGAATTGGTGACAATAATCTGCAAAAGCTTGTAAAATCTCATTTCTTAAAAAGTAACGTTTATGATCCTTGCCTAATTCTAAGATAAAGTCACCTAAAACATTTTTTTCATCACTGTTAACAATAGTTTGCACTAATTTATACATTGTACATTACCAAACTCTAGCTAAAGTTAGGATTATTGAGATACTATTTCAGGTTAATAGTAAATAAGTTACTCAATTATTTACTTCTAGCTAAAGGATGAACCCTTACCTCCTCTTATAGATAGAGAAGTATCTATTAGTTAGATGACAGGGAATAGATAAAATTTTAGCAATCACTAATTTCAACTCAATAACTACCAATTTGGCTTTGTTGCTATTAATTACCA # Right flank : TTTAATACGCAATTTAGAACTGACATTTTCTGTACTATTTAGAGTAACAAATTGCCAATTTGGCGTACCAGACAGGGAAAACATAGTATTCTGCATATAATAGTGTCACAAGGAGTATTTACAAAACTGAAGCCAGGAAAAATTTCAATGTTGTATGACTATTTAAATAGTGTCATAATCCAAATATCTGTATTTCCTATTTTTTACCAAACAATCAAGTTGGACAGGAAATGCTAGGAATTTGCCTATATTTTTTACTAACACAAGGGTAATGTGGTTAGTAATTTTCCAGTCTTTACAATCAAAAATTTCAGAACTTAATCTATTTAGATCATCAATTGCCAATGATACACCCCTAATTAAATGGATAACACTGCTCACTAAACCTCACAGAAAATTCATAAAGTTCTCTGATAACCACAAATAATGTTGATATTTAATCGGTAAGTTATCGCTATACTCGGACTTAGATATCGAAGTTATTTACCAAGAGAATTAAA # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTGTAAATCTCCCTTGTGACAGTATTTAAATAGTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.20,-3.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //