Array 1 753473-754292 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009933.1 Clostridium scatologenes strain ATCC 25775 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 753473 30 100.0 36 .............................. CGGGTATAGCTAACCTTATTTTTGGGTTGATATTAG 753539 30 100.0 36 .............................. TTTTTAAACTCCAAAATTTATATCATCTAAAGCTTT 753605 30 100.0 36 .............................. TTATTGGCTATGACTTGTAAATTGTTTGAAGGGTTG 753671 30 100.0 36 .............................. TAGCCAATAATGATATGACAGTTACTATTAAAGCAG 753737 30 100.0 37 .............................. AGAGCTGGACAGACTTAGTCCCTGGAATCGTTAGCAA 753804 30 100.0 35 .............................. GATAACTGTGCATATATTTGAGTAGTTGCTGGTGT 753869 30 100.0 36 .............................. AATAATGATACACAATGCAAGTGGTTGTTTTGGTGG 753935 30 100.0 36 .............................. ACCATGTTGGTGGTCTTATCTTATTACTCTGCAACT 754001 30 100.0 35 .............................. TATCGAAGTAACTGACTAAGTGGTACACAATACAA 754066 30 100.0 35 .............................. CTTTTTCGTATATCAAAACCTGAAGGTATATAATC 754131 30 100.0 36 .............................. AGAAATTCTTTTACTCGTATATATAATTCCAATGAA 754197 30 100.0 34 .............................. CACATACAGTATAGCTCTTTTATTCGTATTGTTA 754261 30 93.3 0 ................GG............ | TG [754288] ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.5 36 GTTGAACTTTAACATATAATGTATTTAAAT # Left flank : AATAATAAATGCAAACAGCGCAAGCTATAGGATTTATACGAAAGAAGCAATTGAAATATCAGTTTGGTATAAAAGACATGCTGAAGCTATGATCAAGTAATAATTTTAGCAAATCCATTGTTATTCAGGAATATTCATATATAGATGATAGCTATTTTATCAGTTGTATGAGTAAATATGATGCCTTTAAAGTCTTGAAACATTAGGATTAAGGGCATTTTCTATTATGATTCAAAAGTAGTGATAATTATTGTAAAACTTAATATAAATTTAATATTTAGAATATAACAATTAAATGAGTACACTTGAATGCAATTAGGAATTTTACCAGCTGAAACTAAAAGCAAAGTGCTTCTGAATGACTGAAATATAAGGCTTAATGGTATTTTTTATATTGAATTTTTAAAAATTAAAAAACGGCTGGTAAAATTTCAACAAAATCCTTTATTTACAATGTATTAAAGGGTATAATAAAAAATAGAAATGGCTATTTTACAGTG # Right flank : TTAAGATTTTCTTCAAATATTTGAAATTTAACTTAACAAAAATTTATTATAAAATTAGCTGCAGAGGTGTTTCATGGATATAACAATAATAAAAGGAAATATAAATTACATAGATGAATGTGAAGCTGCATTAGTAAATTCTGAATTAGGCATAAGATATTTTGATAAAAAAGGAAGTGCTAGAGAAGCATTGATGGAAGGCTTTGATAAGGGACAAGTATATGTTGCTATTGATGATAATAATAATTGTAAAGGGTTCATATGGGTTATTCTAAATGGAGCATTTCATTCGTTCCCTTATTTACATATTATTGCAGTAAATCAAGAAAGTCGTAGTAAAGGAATAGGTAAAAAATTATTAAAATTCTTTGAGGATATTTGCTTTAAAGATTATAATAAACTATTTTTAGTAGTTGGAGATTTTAATTCAGCTGCAAGAATATTATATGAAAAAATTGGATATGTTCAAGTGGGTACTATACCTGATTTGTATAGAGAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATATAATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [76.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 757646-760179 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009933.1 Clostridium scatologenes strain ATCC 25775 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 757646 30 100.0 35 .............................. TTTTAAAAAACTGGTAAAAAATTATACTGGAGTTG 757711 30 100.0 36 .............................. ATGTTTCCAATTTTAATGTGCTTATTTACTATTTCC 757777 30 100.0 34 .............................. TATACTCCTGATCCGTTGCCTTCTTTAGTTGTTA 757841 30 100.0 36 .............................. TTACTATAGTCAATTAATTCTTCTAGTACTGTACTA 757907 30 100.0 37 .............................. TTGGAAACAGCAGCTATAAAGTTGGAACAAACTTTAG 757974 30 100.0 36 .............................. TAATCCTTTCCTGCTGTAGTAATTATAACTAACAGT 758040 30 100.0 36 .............................. ATGGTGATGTCCTATTGTTCGTGCAGACAACCCTCC 758106 30 100.0 36 .............................. GATTTAAAAGACTTCTATGACAAGAAACTCGATTCA 758172 30 100.0 36 .............................. GAGACTAGGGATGGTCTTTTTATTTTGACTATTTTG 758238 30 100.0 34 .............................. ATGTTATGTTCTAAATCAATCCATTCACCCATAG 758302 30 100.0 36 .............................. TTAGAGTTCTAACAGCTACATTAGTTCTTAAAGCTG 758368 30 100.0 36 .............................. TTAATGCTTCCATTCTATTTATTCTCTAAAACACCA 758434 30 100.0 36 .............................. AAACGACTTCGCCATTTATCCTGCTTACCTCTCTTT 758500 30 100.0 36 .............................. AAATCTGCACCAACTTTTACTGCTGCTGCAGCAACC 758566 30 100.0 36 .............................. TTTTCTATAAAGTATGCAAATAAATCCAAACCTTTA 758632 30 100.0 36 .............................. TCTTCCTCTAGTCCTAAATACTTTTTAGCTTCATTT 758698 30 100.0 36 .............................. AATAATCAAAATGCTCTTTACCTTTGCAAAATGTTT 758764 30 100.0 36 .............................. TTTTTAAACTCCAAAATTTATATCATCTAAAGCTTT 758830 30 100.0 36 .............................. TTGCCTGCAATTATTGCATGACATCCACCATAATTG 758896 30 100.0 36 .............................. GCCTTTGTTGTTATTGTAGTGAGAGGTTTATCTAAT 758962 30 100.0 36 .............................. TAACATAATTAAACGCAATGTAGGAATTTACGTAAA 759028 30 100.0 35 .............................. AATAATAGATATCTGCAAAGAAAATGATATGCAAA 759093 30 100.0 36 .............................. TTACATAAGGCTTTTGAGCCACATACCCTAGTCTAA 759159 30 100.0 36 .............................. TAGGAATAGATTTAAAAGCATTATTGCTTGTAATGG 759225 30 100.0 35 .............................. ATTTATGTAAGAATCTATTAAAACAATTAAAAAAA 759290 30 100.0 36 .............................. TTAAAGATCATAACTATTTTAAATAAAATAATTACA 759356 30 100.0 37 .............................. AAAGAACAATGTGAACAGGAATTAAAAGTTGTTAGAT 759423 30 100.0 36 .............................. ATGGATTTAATATTATGTTATTCATATTTTTACCCT 759489 30 100.0 36 .............................. CGATTGGGAAAATCTTTACCTAATATAAACCCAGGA 759555 30 100.0 36 .............................. TTGCCTCCCAAATATTATAACTTTTTATAACTTCTC 759621 30 100.0 35 .............................. AGCATGTTAGTTAGTATATCTTTGAATATAGCTTC 759686 30 100.0 36 .............................. ATAGCTGTTAATCCAGTAGCAGGTATCAAATATGGA 759752 30 100.0 36 .............................. TTATAAAATGAATTCCCTGTATATATACCAATTCCA 759818 30 100.0 35 .............................. TTGCTCTGCAGTTATTAGCCTATAATCTTCAAATC 759883 30 100.0 36 .............................. TGGAGCTGTGATAAAGATTCCGTAGGTATAAGTCTT 759949 30 100.0 36 .............................. CATATTCTTGAATTTATACAGAGTAAAGAGGTGAAA 760015 30 100.0 35 .............................. ACTATTTGTACATCAAATGTGGTATCTCCTTGTGT 760080 30 100.0 37 .............................. GATTGTCCTACATAATAAGTTGCATTATTAAGTGCTA 760147 30 86.7 0 .C..............T........G...A | ACA [760171] ========== ====== ====== ====== ============================== ===================================== ================== 39 30 99.7 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : CAGGACAAGCAAGAGTTTGGTTAGATCGTACTTTCCCAATGGTTGGGGAAAACTTTGCACCAAGACACTCTGGTAAAAAGGCAATAACAATATTTGCTCAAGGTAATCCAAATCCACAAATAGCTGAAGAAGGAATTAAATTTGTTACTAACATTTTTGAAACATATGGTTGGAAAATAGAGGATAGTATTCATTACTGTGGAACTAGCTCTAATCCTGATTTAGAAAAATTTGAGGAGCTATCTTTAAGAGCTTTTAAAGATGGGGAAAATTTAGTTGGGTAAATTAAGCTTGACAAATTACTAGTATATTTTAATAAGAATTTTACCAGCTGAATTTAGAAACAAAGTACCTTTAAAGCTTTGAAACATAAGGCTTAAGGGTGCTTTTTTTATTTGAATTTTCAAAAACGAAAAATGGCTGGTAAAATTTTAAGAAAATCCTTTATTTTCAATGGATTAAGAGTTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : AACGTATTAAGGAATTTGAACAGAGGATTATATTATTAATTTTACTCCACTAAAATCGTTTAATAATTTTTTAGCAATCAAAAGGTCTTTCATTAATTTTTTTAGTGAGAAAGACCTTTTTACTTGATAAGTGTTACCATATTAGAAAATTATTCTGTTAAATTTATCATTTTCTTAAGTGATGTTACATATTATAAGGAAAGATATATATAATAATATTAATAATTTGAATTTTAATAATTTTATATTGTTTATATTGACACAGGATGGAAAAAATGATAATGTATAAAACAAAATACAGTAATTAGCTATGATGAGGAAGAGTAATTACAGATTTGAAATAAAGAGAGGAAATGATGGTGAGAATTTTCCGTGATAGATGTGATGAAGGTAGCCTTGGAGCTTTAAACCGAAAGTATTATATGAGTAGGCTTTAATGGAGTTCCAACCATTAAAAGGGAAGTAGTATCGGTAGAGTTTACCCGTACTATAATGAGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 766433-768564 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009933.1 Clostridium scatologenes strain ATCC 25775 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 766433 30 100.0 36 .............................. TATGTATTTAAAATTAATTTTGTTGATTTAAGATTG 766499 30 100.0 35 .............................. ATCATATAATCATCTTTATAAATCCATACTGTTTT 766564 30 100.0 35 .............................. TGGCATTTACCGTATCTACTTTTATTGGTTTATTA 766629 30 100.0 36 .............................. GTAGTCATTGCCTTAAAATGCATCAAATCAGTACTT 766695 30 100.0 36 .............................. TTTTAGATAACATATATTCTTTAAACTTGTCTTTAG 766761 30 100.0 35 .............................. CGTGAAAGCTCATTTATTTTAGTTTGAATATCCTT 766826 30 100.0 35 .............................. AATGCTTACAGAATTAAAACAGGTTTAAGTAATGA 766891 30 100.0 36 .............................. AATGAATAATGATGTTGAACCAATTATGTAAAAACC 766957 30 100.0 35 .............................. ACAAAGCTTGAAGCCGAGGCAGAATGGATCGTAAT 767022 30 100.0 36 .............................. ACAAACCAGGCATTGCTGCCATTATTTCTTGTGTAG 767088 30 100.0 36 .............................. ATTCCTAAAAGACTTGAAGCATACAACAGTTTTTCT 767154 30 100.0 36 .............................. ACTTATCCCCTCCTTAGAGAGAGGATTAACCTCTCT 767220 30 100.0 36 .............................. GCTTCTAATGGAGCTACTGCTTTTAATTCTTGATCT 767286 30 100.0 35 .............................. GATAACTGTGCATATATTTGAGTAGTTGCTGGTGT 767351 30 100.0 36 .............................. AAGAAAAATGCCAATAGGATGCGTCTTAGAAATTAG 767417 30 100.0 36 .............................. GCATCTTTTCCTTTTGTGTAAGTAACAAAATATATT 767483 30 100.0 36 .............................. TACATATCTGAGTTAGGGTGTGCATGATATTCGTCT 767549 30 100.0 36 .............................. TTTTCTATAAAGTATGCAAATAAATCCAAACCTTTA 767615 30 100.0 34 .............................. GATGAATTTTTAGCAAGTACCATAAGTTCCTTTA 767679 30 100.0 36 .............................. AAAGTTTTATGAAAACTATTTCCATAATCGGCGTTC 767745 30 100.0 36 .............................. AGAATAATCCAAACTATGTTAAATTCATAAATAATC 767811 30 100.0 36 .............................. AAGAAAGAAAAGTTATATATATAAAAATTTTGATAG 767877 30 100.0 35 .............................. GTAGGAACACAAGTCTCTACAAATACTTTAGATAT 767942 30 100.0 36 .............................. TTAACAAATGGTTGTTTCCCATTGTCTCTCCATGAT 768008 30 100.0 35 .............................. AGATTTATGTCTTTAATCTTTCCTTCAAATTTATT 768073 30 100.0 36 .............................. GATGCAGGTGGTTTTATGATTCGCGAAGTCGGTATA 768139 30 100.0 36 .............................. TAGATTAGTTTGTGCTTTTGAAGATGCAGGATTTAT 768205 30 100.0 36 .............................. GATGAGGATCCTGCACAAAAAATTACTGACAAATAT 768271 30 100.0 37 .............................. TATAGAGAACGACAAGGTTGTTAGTAAGAGAGGTACA 768338 30 100.0 34 .............................. ACAAATAATTAATTTGTACAAAGCTCTAGTAAAA 768402 30 100.0 37 .............................. TTCCCAAATCCACTTAATTTTGTTATTATTCCAGCAA 768469 30 100.0 36 .............................. TTGTTCCAAGTCAATACAAATTTATTCAAAATCGTT 768535 30 80.0 0 ................T.GCA....A...A | ========== ====== ====== ====== ============================== ===================================== ================== 33 30 99.4 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : GATATAGGAAAAAATGGTATAATAATTGAGTTTAAAAAAGTTAATAAAAGAAGAAAAGAAACTTTAAATACAGCAGCAGAAAATGCATTAGCTCAAATAAAAACTATGAATTATAGACAAGAACTTATTGAACTTAGAGTGAAAAATATAATAGAACTTGGAATTGCTTTTGAAGGAAAAGATGTTTTTGTTTTAAAATCAAGTGATTCTTAGAAGAACTTATTCAGGTGCGTAACAGTGCTTATTCACCACTTGAAGAAGATGGGGTATTAGAAATGGTAGTGATCAGATAAAGTGCAATTTTACTTGGGTTAACTATGAATTTTACCAGCTGAAGTTAAAAATAAAGTGCCTTTAAAGCCTTGTAATATAAGGATTAAAGGCACTTTTTTTATCTGAATTTTCAAAAGTAAAAAATGGCTGGTAAAATTTTAAGAAAATCCTTTAATTTCAATGGATTAAGAGGTATAATAAAAAATGAGAATGGCTATTTTACAGTG # Right flank : ATAAATGCTATTGCTTTAAATTAGCAGTAGCATTTATTTTTATGAATGTTTAAATAGCATTGTTTGTGTTAAAATAATTGTTAAGGAAGGAAGTGGTTAAGTGAAAAAGATTCCTATAGGTATAACTGATTTTAAGGAAATTATAAATAATAATTACTATCTTGTAGATAAGAGTTTGTTTATAAAAGAGATAATGGAAGATGGATCAAAAGTTTTATTATTGCCAAGACCAAGACGTTTTGGGAAGACCATAAATATGAGCATGCTTAAGTATTTCTTTGAAAAGACTGATGAAGATAATAGTTTTCTTTTTGAGAAATTGAATATATATGAACATAAAGATATTATGGGAAAGCAAGGAGTATATCCTGTTATTTATATAACTTTTAAAGATTTAAAGGATAAAAATATTGATAAATGTTATGAAAAGATAAAAGAAATTTTAAGTGAACAATATGATAAATTTCAATTTATATTAGATACTTTAAGTGAAGTAGATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 803483-804017 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009933.1 Clostridium scatologenes strain ATCC 25775 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 803483 30 100.0 35 .............................. CAATTACAGATACTATTATTTGGTGTTTTATCTTC 803548 30 100.0 36 .............................. AGTATTAAAACTGTCTTTAGATAACATCTTATAACC 803614 30 100.0 36 .............................. CAGAATCAATCCAGATGATTGCGGCAATGAAAATTT 803680 30 100.0 36 .............................. TGTAGAAAGTATGTAGATAAATGGATAGAAACCGAG 803746 30 100.0 37 .............................. GCTTCGCCAACACTACTTACAAGTTCATCATATTCTT 803813 30 100.0 35 .............................. ACAAATTTTAATTTTTCTAATTCCTTTATAATATT 803878 30 100.0 37 .............................. TTGTTAAGTTGTATCCCATCTATATATAAATCATCTG 803945 30 100.0 13 .............................. GATTATAATTTAA Deletion [803988] 803988 30 73.3 0 A..T....T..G..A.A.T..C........ | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 97.0 33 GTTGAACTATAACATAGGATGTATTTAAAT # Left flank : GATATTTACCTAGAAAAATAAGTTGGAGGTGCATTTAAAATGAATATAGATGAAATTAGAAGATTACATTATAAACAAGAGTGAAAAGAAGATGGGGTTGCAGAAGCAATAGAACAATCTAGATTAAAAAATGTTGAAATGGTTATAAAATTACTAAATAAAAAATTTAAAAATGTAGATGGAGATGTAATAGAAAGGATAAAAGTATTAAGTAGTGACAGTCTAAATTTAATTATAGAAGATATACTGGATATAGAAAGTATAGAAGATTTAAAAAAAGTATGGGATTAAATCCTGTTAAAATTAAAATCTGATAAATATAATTTACCAGCCATAAGAAAAACCAAAGTGCCTTTAAAGGATTCAAATATAAGGATTAGAGGCAATTTTTACATTGTATTTTTAAAACTCCCAAAACGGCTGGTAAAATTTCAAGAAAACTCTTTATTTTCAATGGGTTAAGAGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : TATGTTGTTTATGAAACATTTAATGTGAACAGTAACAAGTGTTGTGTAAAAAGTTATGTAGTTGAAGAATAAATACTCAAATTCAATGTTATTTATAAAATAATTTAATAACTTTGAAATTTAATTATTATGATAAATGGAGATGCTGGAAAATTAAAGGTTTCATAAGCAAAGCTATATTTACAACAACGATATTAACTGGAGTGTATATTTTATCTAATTCAAAAAACTTAATAAACTTAGGGGTGAATTTTAAAGAAAGCAAATAGGTGATTTTTATTACTTAGTTGCTTTTTTATTTGCGAAATTGATGTTCTATTAATGTGAATGTGAAGATATTTTTGAAATTCTACAAAAAATTTGAAAAATTATGAAGGTATTGTAATAAAAACATAGAATAGTAATATATATGAAATTAATTGTTATATTTAGAAATAAATATAGATAGATAATATTTTAATTAAAGATTAAGTTATTTAACTTTTAACTATCAATTTTTA # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 5 813678-814564 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009933.1 Clostridium scatologenes strain ATCC 25775 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 813678 30 100.0 35 .............................. TTCCATCTGATTTGATAACCGCTATGTCCATGATT 813743 30 100.0 35 .............................. CAGAACAAGTCTTATAAAAATGATTACTATAGCAG 813808 30 100.0 36 .............................. TCTATAAGTAATATAGCATTGCTTAGTACTTCCATA 813874 30 100.0 37 .............................. AAATAATGAATTTGGTGTTGGAAGAATAATTTTAGAT 813941 30 100.0 36 .............................. AATACCATTAGCAGACATACAAGCAAGAAGATTAAC 814007 30 100.0 36 .............................. TCCCTGTTGCAACATGATAGGAAAGCGAATATACCC 814073 30 100.0 36 .............................. CTTCCTTTTATTATTTTATATTTCTATCCATTTAGC 814139 30 100.0 36 .............................. TGTAACCATATAATTATTTTAAATTCTTTATCATTT 814205 30 100.0 37 .............................. GATGGTGAAGTAACAAATAAAAGATTTGTTGGTGGAA 814272 30 100.0 34 .............................. CGAATAAAATTCCCAAAATGAAAGTTTGAAACCT 814336 30 100.0 37 .............................. CAAATCAGTTTTAAATGTTTTCCTAATATCCACAATC 814403 30 100.0 35 .............................. GAACTTGGATCATCAGGAGATATAATTCTTTGTGA 814468 30 100.0 37 .............................. CAGATGATGAACGATTTAAATGTACTTATGATAGCAG 814535 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 36 GTTGAACTATAACATAGGATGTATTTAAAT # Left flank : TTGTACCATTTAGCCTTAAGGAGATGATGTGATGTGGGGAAGATAGAAAATTGTAATTATGCCTTTGTTTTTTATGATATTAATGAAAAAAGGGTTCAAAGAGTTTTTAAGATTTGTAAAAAGTATTTTAAACATCATCAAAAATCAGTATTTAGAGGAAGTATAACTCCATCTAATTTAATAAAGCTAAGAGCAGAACTTAAAAAGGTTATTGATGAAAGTGAGGATTTTGTATCAATAATAAAATTAATGAATGAAAAAAGCTTTAGTGAAGAAACATTAGGAGTAAATTTAGAAAATAGTGAATCATTAATTCTTTAAATTTTACCAGCTAAAGCTAGAAGTGAATTACCTTTGAAGCTATGATATATAAGGCTTTAAGGGTAATTTTATATTGCAGTTTGAAAAATTAAAAAACGGCTGGTAAAATTTTAAGAAAATCCTTTATTTTCAATGGGTTAAGAGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : TAAAGTTAACCATAACAAGATTTTTTATATAGTATATTTAACAAAGCATAGATCAAGCTAAGCGAAACAGTAACTTTGAATTGAACTTAATTACTATAAAATTATAATCTGAGAATTAGCTAGATTTATTCCATTGCTGCCATTGCTAATATCTACACCTTCTTTATATGGAGCTCTTTCATCTATTGTTCAAGGAGTAAGTGATCTTGGTTTTGTACTTAACTTGGATAAGCTTTTCTAAGACTCAGATGTGTTAAATGTCTAGATGAGATTTAACCAGCTTGCTTAGGTAAGAAGTATTACTCATAAGCAAACTTCAGCTGAGTATAGGAATCACTTAATTTCTTTTATTTCAATCTGTAATTATTTTCCTTACCACTTATTGCTACAATGAAATTTTTGTACATTTCCAAAATTCTACTTCCTATACATTTTTGTAGCTTCGTTATAAACCTTGTAGTTTCCGAAGATAAGTTTATTTCTTCGTGTTTCTATGCCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //