Array 1 1483959-1483263 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNHB01000002.1 Weissella cibaria strain GGI4 Ggatip4_contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1483958 36 100.0 30 .................................... ATGAGCAACGTAATCGAAATCGATTGCGTT 1483892 36 100.0 30 .................................... ATTCGCAGCTGTCGCTTTAACGCTGAAGGA 1483826 36 100.0 30 .................................... ATGCAACAACATATGACTCGTGGTACACCA 1483760 36 100.0 30 .................................... TTTAGCCTTTGCAAGTGGTTGCTGCGCTGT 1483694 36 100.0 30 .................................... TTGATAAAGATTTCATCTCCTAAATGGCCA 1483628 36 100.0 30 .................................... GCCTTCATAGCTTCAGCAACGACTTCCTTC 1483562 36 100.0 30 .................................... CCGGTTGCGATTTGCTAAGCAAAAGCAAAG 1483496 36 100.0 30 .................................... TGCCCGTGCAGTTAATGCTAGCCATGCCCC 1483430 36 100.0 30 .................................... ACAATTCGTACCAATCAATCGGCATAGCAC 1483364 36 100.0 30 .................................... ATGTTCGAGTTTAAACTGGTCGAATTCGAC 1483298 36 86.1 0 .............A...........A...TC....T | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.7 30 GTTTTAGTGTCATGTTGAATAGAATGCTTCTCAAAC # Left flank : CAGATTATTAAGGATGAATTGGTTGAATTCGAGATAGATTTAGTTAGTGATGAAATTTTATTGACTGAGGCGCTTAAATCACTGGGGGTTAAAATTGAAATTGTGTCCGATACTATATTTGAAAGATTTTTTGAGATCATTCAGGTATTCAAGTATTTGAAGGCAAAGGAACTACTGGTAGTAATCAATGCAGGTGTTTATTTTTCAAAGTCTGAAATAGCAGCAATTTCAGAATACACGGAACTTCAAAATATGAATATGCTGATGATCAACTCAGCGAAATATGAAGGTGTAAAAAGCAGATATGTATTGGACGAAGATTTTGTTATCATGCATGAACACATGGTATAATTAATGTATAAATTTAAAAGTTAAATTGCTCTTTGACAAGTTAATTATAAGGCGTTCTATTCTGAAAACTAGCCAAGTTTAGTGAATTAATAGCTGTTATAGCCACTTGAATTAAATGTTTCGTATTTTGAATAAAAATACATTCCGAG # Right flank : TGGATCTATGTAAACAATGTTGGTTGTTAATATAATTAGAAATACATATAGAGACTGGGATAGATCCGTTTATCACAAAAGAATAGGCCGAAGAACTACGCGTATCAAGCGCAAGTTCTTCGGCCTTTATTTTTTAATGCGGAGATTCTTAGTTAAAACGATATTACTTAACGAACAACTAGTTTCATTCGAAATTTGGTTTGTCTCTAGTCTATTTGTTTAGCCTTCTTCAATCTCCGTGACGTGACCATTATGGAGGTAACCGTCGTATGTGTTAAGTTGTTGATTGGCCGTTGGTGTAATTAGCGAACGAAGACTTTCAGCGGAAAAATCAGTTGTTCGACTGGCATGGTTCGCACCGTTTGTATTGTAGACAACCAAGGTTGGAAACTGAGTAACGCCCATTTCAGCGGCCATGTTGTGATCAGCACGGTAGGCTTGAATCGTTAAGTCACTGTTACGATCCTCTAAGAAGAGGGTTGGATCAGCTGCAATATCTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTGTCATGTTGAATAGAATGCTTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //