Array 1 120814-119635 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLV010000013.1 Actinomyces naeslundii isolate Actinomyces_naeslundii_BgEED02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 120813 36 94.4 34 ............C....................A.. GCGACATCCCATGCTTATCCTTCGTCGTCACCAG 120743 36 97.2 37 ............C....................... CCGGCGCGGTCGAGATGGCCGAGGCCAAGCGCCTGTC 120670 36 100.0 35 .................................... GACGCGGACCCTTGCGTCTCGAATGTGATTCCCCG 120599 36 100.0 34 .................................... TGTCGACCGGGATGTCCTGTTTGAGGACCTTCTG 120529 36 100.0 35 .................................... CTGACCGCCATCGAGCTCCAGGTCGAGCACTACCG 120458 36 97.2 35 .........................A.......... TCCCGGCGGGCTAACCCCGCTCCGTTCATGTATTA 120387 36 97.2 34 .......C............................ CGCGCGTGCGGGGGTCAAGAATCCCTAACAACGG 120317 36 97.2 35 ......................A............. GTTGGGGTATCGGGTTCGTTCCCGATGGCTTAAGT 120246 36 100.0 35 .................................... TTGGAGATGGAACGCTTCGGCCCGGCGTCCGTGAG 120175 36 97.2 38 .................C.................. TCCTGCTGGCCGTTCGCCTGCCTCGGGCGCCCATCGAT 120101 36 100.0 34 .................................... ATGTGGTCTTCGAGTCTTTGCTCCTTGGTGCGTA 120031 36 97.2 39 .........................A.......... GCAGGGGCTGACGCCCACTGCCCGCTTCCCGGGCTAGGC 119956 36 100.0 37 .................................... CTGATCAGGCGCACGCACACTTCGACGGCACGCGCTA 119883 36 88.9 35 ............C............A.......A.G ACCAAGACCATGTCCGTCTCCCTCCCTGAGGACCT 119812 36 94.4 35 .................CC................. GTGAGGCCCTGGATCTTGGTGGCGAGGGCGGGATC 119741 36 100.0 35 .................................... TCAGGCACGTTCGTGGGCACGTGGACCGGTGACCA 119670 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 17 36 97.7 36 GCCTCAATGAAGTGCAGTTCCCGAAGGAACTGCGAC # Left flank : ACGCAGGACGTGGTGGCGGCCCGGGCGCTGGCCCTGGCGGTGGAGCTGGCGGTCGCCGAGCGGGAGGAGCAGGAGGCCCGGCTGGCGGCGCTGCGGCGTCGGATCCTGGAGGGTGCCGGGGCGCTTGCGGGCGTTCACGCCACGTTGCCGGAGGGTGCCGATTATGTGGCCTCGACGGCGCACCTGTGGTTCGAGGAGGCCGACGTCGAGGCACTGCTCATGGCCCTGGACCTGGCGGGGATTGATGCGTCGGCGGGGTCGGCCTGCCACGCCGGGGTCACCCAGCCCAGTCACGTGCTCCTGGCAATGGGCTTTGAGGAGGGGCCTGCCCGCTCCACGCTGCGCTGCTCCCTGGGTAGAGAGACGAGCCCCGAGGACGTCGAGCGCCTGCTCACCGCCCTGCCCGCCGCCCTGGAAGGAGCCAGGCGCGCCTGGAAGGTGACGCACAAAGAGCAGTAGGTGGGGATCAATAGCCGCGATAGGCATATCGATCCCCACCT # Right flank : GGCCCGCTCAGTATAGCCCGCCACCACGCACATCTGAGGAGACTTCGCGAGCGCTCCGCGCTCGGACTCCCGCTCGGCCACCCCACTCCTCACCCTACCTCACAGATTCCGCGCCGTTTCAACGTTCTACCGCAGCGAGCACTGCCCGGGGATCCTCGAGCACCGGAGCGCTCGCATCAGGCGATAAGCGGCCCCTCTGGCGTGATCGTCCTGGTCAGGCCGACATAGGAGAATCGTTGTTCATCGACTGCGGACAGCAGGCCGACGTCGCACAGGAGCACGGAGTCCTCGTCCGTCTTGATGACTCCTTCCAGCTCGCCCCGCATCCGCAGGAGCTTGGCCGGCGCCGCATCCACGACGAACACGGAGTACTGGATGCGGTCCCCGTACTTCAACAGAGTCTTCGCCACCCGCGTTCGGCGCCGGTCGGACGGGACGTCGTAGGCCACGAGCACACGTCTGACATCATCACGCATCAGCGCACCGTCACTCCCTTGTAA # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGTGCAGTTCCCGAAGGAACTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //