Array 1 461101-462491 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_014484.1 Spirochaeta thermophila DSM 6192, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	================================	=======================================	==================
    461101	    32	 100.0	    38	................................	TGTGACACGACTGACCTAGTAAAACAGCAACTTTTAGG 	
    461171	    32	 100.0	    36	................................	ACGACAAACTCTATGCGGCCATCCTCCTCTCTGCAG   	
    461239	    32	 100.0	    37	................................	ATGATTTGAGACAGGGAATTGAGTATACCGCAAAATT  	
    461308	    32	 100.0	    35	................................	ATCTTGATCCGACTAATTTTGAGTTGCCTCAACAA    	
    461375	    32	 100.0	    35	................................	AATGATATTCTGAGTGCTGGTCTTAGGATTGTAGC    	
    461442	    32	 100.0	    34	................................	CAGCAGGGGCAAGCGTCTGCACAATTACTATGAG     	
    461508	    32	 100.0	    35	................................	AAATGGATGTCGCCTGACAGCGATGGCTTTGATGA    	
    461575	    32	 100.0	    37	................................	CCCCCACCGGGGATGATGAAGCGTTCCCAGCCCCCGC  	
    461644	    32	 100.0	    35	................................	AATTGCCTCACCTGCCTCACCCTTATTGGCTGTAC    	
    461711	    32	 100.0	    34	................................	ACGCCCTCCAGAAGGAACCCCGGGTGCTTCTTCC     	
    461777	    32	 100.0	    35	................................	ATCTTGATCCGACTAATTTTGAGTTGCCTCAACAA    	
    461844	    32	 100.0	    36	................................	TCCTTATGGACACTAAAACAGGTGATTACTTTTTAC   	
    461912	    32	 100.0	    35	................................	CATTGGATCCCTCCATATGCGTGATGTGTGATCTA    	
    461979	    32	 100.0	    39	................................	CATCTCTCTTCTCGCTTCCATTGGATTACCTCCATCTTA	
    462050	    32	 100.0	    37	................................	AAACCACAAAAGAATATAAAACAATACAGGCAGTGAG  	
    462119	    32	 100.0	    36	................................	CTTGGGGGTTTTTGTTTCTTACAGCCGGCAAAACAC   	
    462187	    32	 100.0	    36	................................	GTGTAAATATTTAGACTAGTTTTCATTCCTGCTTGG   	
    462255	    32	 100.0	    37	................................	CGCGGCGGATATCGCGCAATTGTCGGTGCTGTCGTGA  	
    462324	    32	 100.0	    36	................................	ATTATAGTAGCGGCGGCAAGACACGCGGCACTGACT   	
    462392	    32	 100.0	    36	................................	AGCCAACCTCTCCTGCCAGTCTGGCATCAATATCTC   	
    462460	    32	 100.0	     0	................................	|                                      	
==========	======	======	======	================================	=======================================	==================
        21	    32	 100.0	    36	GTCGCGCCCCCTGCGGGCGCGTGGATTGAAAC	                                       	       

# Left flank :   CCCGCCTTTTTCTGGAAGTAAGATGCAAGGGGGTGGTTCGAGATGATGGTAGTAGTGAGTTATGATGTTGGTCAGGATGAAGGAGGTCAAAAAAGACTTCGCAAAATGGCGAAGCTCTGTGAAGGGTTTGGACAGCGGGTTCAATACTCGGTCTTTGAGTGCCTTGTCGACCCCGCGCAATGGGTCAACCTGAAAGCGCACATCTCCTCGATCATCAATCCGGAGTACGATAGTGTGAGATTCTATTTCCTGGGTGCCAATTGGAAGCGACGCGTGGAGAGCCTGGGGAAACAGCGATCGTTTGAGCCCGATGAACCTATGATCATCTAGTACGGTCGCGAACCTGAAGGTGTGAGAAATCCTCGGGAGGTTCGTTCTTTGGTAACTGGAGAGAAGGGAAGAAAAAAGGGGAGAAGGGAGAGGGGGATGGCGTACAAGGGACTTGATTTCGGGGGAATGAGGATGTAAGCTATTGTCTTATAGAGAGAAAAAGGTATGCA
# Right flank :  CTTGGCGTATTCTCCATAGAGGAGCACTGTAATTGTGCCGATCCCTACGGGGTCGGTGGTCCCCGTTCGTTGGGTTTTCCGGCGAACGGGCTTTTATTTTGGGGGATTGCCTATTGCCCCTCACCTATGCTGGATGCTGAAAACCCACAGCGTGGGTGTCACGGCAGCATTGGGCATAGGGCGGTGTTCCCTCTACTTGTAAAGAACGAGAGTGGAGATATAATCAGTGGGGAGAATCTGTGTGATCTGCTGGTCGAGGCATCTAGAGAGCAGGGCGGTACACGGTCGATAGTCACCCTTGGTCCTTTTCGACACGGTGTACGACGGTATCCGTTGTGGGTGAATATATCTGAATATATCATAGACCAGGAGGGAGTATGGGCCTGAGCAGGTCGTTCGAACCCTGGAATCTTTTTGTGGGGGTGCTCCTCTCGAGCGAGGTGTACGCCCTGGATGTGCAGCGGGTGTTGGAAATGGAGTGGGGGCCTGTGGATTTCGTC

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCCCTGCGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.80,-7.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.27,0.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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