Array 1 20202-20596 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKYM01000017.1 Corynebacterium diphtheriae strain rz319 contig000017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20202 29 100.0 32 ............................. CCCCTGTGGGTTGTCACCCGCGAGGGCAAAGC 20263 29 100.0 32 ............................. ATAACCGAAAAGTTCCCGAATACTACCGATTC 20324 29 96.6 32 ............................C TTGCCGCCGCAATCACAACCCTGAAATCCGAG 20385 29 100.0 32 ............................. ATAACCGAAAAGTTCCCGAATACTACCGATTC 20446 29 100.0 32 ............................. CAAGGGTTGTATCAAAGTCTCGTTGTTGTTCC 20507 29 96.6 32 ............................C TTACACCATAGCATAGTGAGTAACTTTTTACC 20568 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GTTTTCCCCGCACCAGCGGGGATGAGCCG # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAGCCCGAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAAGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATACAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : CACGAGTGGACTGCCTCCCACTTTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 726-26 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKYM01000025.1 Corynebacterium diphtheriae strain rz319 contig000025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 725 29 100.0 32 ............................. TTGCCGCCGCAATCACAACCCTGAAATCCGAG 664 29 96.6 32 ............................G ATAACCGAAAAGTTCCCGAATACTACCGATTC 603 29 96.6 32 ............................G CAAGGGTTGTATCAAAGTCTCGTTGTTGTTCC 542 29 100.0 32 ............................. TTACACCATAGCATAGTGAGTAACTTTTTACC 481 29 100.0 32 ............................. CACGAGTGGACTGCCTCCCACTTTTCTTTCAG 420 29 96.6 32 ............................G CTGCCAGGGCGACAAGGGGCATATCTGTTTCA 359 29 100.0 32 ............................. TCAACATCAACTGCACAGAAACCGGCATCAAC 298 29 100.0 32 ............................. TTGCCGCCGCAATCACAACCCTGAAATCCGAG 237 29 96.6 32 ............................G ATAACCGAAAAGTTCCCGAATACTACCGATTC 176 29 96.6 32 ............................G CAAGGGTTGTATCAAAGTCTCGTTGTTGTTCC 115 29 100.0 32 ............................. TTACACCATAGCATAGTGAGTAACTTTTTACC 54 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.6 32 GTTTTCCCCGCACCAGCGGGGATGAGCCC # Left flank : | # Right flank : CCACGAGTGGACTGCCTCCCACTTTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [18.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //