Array 1 56159-61152 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS483542.1 Coprococcus eutactus ATCC 27759 Scfld_02_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 56159 32 100.0 36 ................................ GCCAAGCTCATCAATTGTGATCTCCCCGGATTTTAC 56227 32 100.0 34 ................................ TATGGATTAAAAAGGCTTACAACTTGTTATGATA 56293 32 100.0 33 ................................ AAGGTGAGAGTGCAAAAGCGTGCAAGTGCAGGT 56358 32 100.0 34 ................................ GTCAGATCACTGGAAGTCTTTATTGTGTTAATAA 56424 32 100.0 34 ................................ ATTGTAAGCGGTGTCATTTTTATATAGAGCTTGC 56490 32 100.0 36 ................................ TGGAATGTAATAAGGACGGTTTATAGAGTGTTTACC 56558 32 100.0 33 ................................ ATAATTGCGCACTGCTAAATAACCCGATTTTGC 56623 32 100.0 34 ................................ TAGCAGTTCAAACCGGGTTAGCTTTGTCTGATAT 56689 32 100.0 35 ................................ GCTCTGCATATATGCGTCTTGCCCCATCTGCATGT 56756 32 100.0 33 ................................ CTTTTGATTTTTGTATTGTCAAAGCAACTGAGG 56821 32 100.0 35 ................................ GCTCTGCATATATGCGTCTTGCCCCATCTGCATGT 56888 32 100.0 33 ................................ CTTTTGATTTTTGTATTGTCAAAGCAACTGAGG 56953 32 100.0 35 ................................ ATTGTTAAGGAGGTATAAAAACATGAGATATTATC 57020 32 100.0 34 ................................ ATCAGTGTGTTTTTTGCAGCAGGCCGAGCAATAA 57086 32 100.0 33 ................................ GCCCACTTGCGCCATCGCGTCATTTAATTCCGC 57151 32 100.0 34 ................................ GAATGAATAATAAGGTCCATTCAACATTGTGACC 57217 32 100.0 34 ................................ GTCATCAAAATAGTAATCGACTATATCTTTCAAC 57283 32 100.0 33 ................................ ACATTAAAGATCTTGGCTTTGACTGTGACAAAG 57348 32 100.0 37 ................................ TGTAGGTTATCTGTAGCATTTACCCTAACAAATTCCT 57417 32 100.0 34 ................................ TTTCAAACAATCCATGCCAAAGTGGGTTCCTTTG 57483 32 100.0 33 ................................ GATGTGATACCGAACCACTTACAGATTGAATCC 57548 32 100.0 33 ................................ AGTCCGGGTGATACCTTCATCACCCTCACCTAC 57613 32 100.0 34 ................................ CCCGATTTAGGGGACAATATAACGGTGTTTGGCT 57679 32 100.0 34 ................................ TGCATACCAGCTACAGTGTCAGCATTGATAGCCT 57745 32 100.0 34 ................................ CGTGAGGGAATGACCATAGGTGAGGCAGAAATGC 57811 32 100.0 35 ................................ GTCAGATGTTAGAACTTTTAAGTGGGATTATGCTA 57878 32 100.0 34 ................................ ATTGATGAAGAGAGTCCGTTTGACAAAGGAAATT 57944 32 100.0 34 ................................ GTCTGGTGGTAATGGTGATAGTACATCTTCTGGA 58010 32 100.0 34 ................................ GTACAGTATCAAGGATATTGACAGATTTTAAAAA 58076 32 100.0 36 ................................ TGCATGATAAAGATGAAAATAAGGACGGAGAATTAA 58144 32 100.0 35 ................................ CTGATGATGCATGAGAATGCGCTTAAGATCAAGAA 58211 32 100.0 33 ................................ TTTAAGGACAATAAGGCCGAGCTTGTAACAATT 58276 32 100.0 33 ................................ AGCACATCTGCAGGGTGAAGGAGGCGAGAAATG 58341 32 100.0 31 ................................ TTGTGTATGTGTGAGCCACAGCGTACGCCCG 58404 32 100.0 35 ................................ TCTATCAAGATGGGCGGAGATATCGAAAAGGGTAG 58471 32 100.0 33 ................................ TTATTGAACAGCTTGATATTTTGTATAAAGAAT 58536 32 100.0 34 ................................ AAAGCAGAGCTTTTACATCATCCGGAATTATACA 58602 32 100.0 35 ................................ ACTGATATACATTGTAAGGTAATTTACACATTTTT 58669 32 100.0 33 ................................ AATTATAATAGGAGATGCTGATACTTCTCTAGC 58734 32 100.0 37 ................................ TCCAATATTGATTTCAGCACAGCAGATGGCGTTAATC 58803 32 100.0 33 ................................ GGAGGAATTATTCAGGGATGAAATAAAACTTGT 58868 32 100.0 34 ................................ TGTGTGCTTGTCCACACTAGGGCACAGCAAAAAG 58934 32 100.0 34 ................................ TTTTGAAAGTGCTTATAGAATGGCAATACAGGCA 59000 32 100.0 34 ................................ TTGTACGGAATGGGAAATAACGGAAAATCAACGT 59066 32 100.0 34 ................................ CTCCAACTCAGGAAAAAGGTCGTAACTGGAAGAA 59132 32 100.0 36 ................................ TTAAATTCATCCGCATAATAGTAATCTGTGTACGTC 59200 32 100.0 35 ................................ TGCTTTAGTATCGAAATAATGACCATATTCATGTG 59267 32 100.0 37 ................................ TTCGCACATTAGTGCCGTCAAGCACTTCCTGCATAAT 59336 32 100.0 33 ................................ ATCTTTAATTGATTACTGTGATCATGATTATGG 59401 32 100.0 35 ................................ TTTAATTGTAAGCCCGCTTTCACCTGCCTGAATAA 59468 32 100.0 33 ................................ GTTCCAGACCGGGAGACCGTCATATTTATTAAA 59533 32 100.0 33 ................................ GTTAAATTCTCTATACTCTTTGATAAGCTGGAG 59598 32 100.0 33 ................................ ATGGCAAAGCGAATGAACCGCCCAAGTGGACAC 59663 32 100.0 33 ................................ TTTTTTGTAGGAGGAAATAAATGGTATACCACA 59728 32 100.0 33 ................................ GTTTCAATGCGCTGATAGTAGAAATCACATGTA 59793 32 100.0 34 ................................ TCTTCCCCTTTTCTGCTATGATTTTCTTGAGTTA 59859 32 100.0 34 ................................ TTGATGAGGATGAGAATATAAAATACAAGGCATA 59925 32 100.0 34 ................................ ACAAATATTCCAACAGTTAAGACGACGGAAGACG 59991 32 100.0 35 ................................ GCTGAGGCCGGGTACACGGCTGATGAGTATTTCCA 60058 32 96.9 33 .......T........................ ATTCATATCTATAGAGATTATCACCGGCATGAT 60123 32 100.0 34 ................................ GCTAATGCGGCATCACAGAACTATGGCACAGCTA 60189 32 100.0 34 ................................ AAGATGCACTTGAGAATTGTTTAATGGATGTTGT 60255 32 100.0 37 ................................ ACCCATGTCACACCAGCTCCATCCAAGATTGTGTATG 60324 32 100.0 35 ................................ ACATAACAGTCACCAAAAATAGCTTTACTCTGCAC 60391 32 100.0 34 ................................ TTTCCTAAACGTTCTGACACTGAAACTATAACGA 60457 32 100.0 35 ................................ TTTAGAAGATCCTGTTTGTTGTAATGGTAAATATC 60524 32 96.9 33 ..T............................. ATTAGCATAAACCCACGAAAAAGCATAAAAGTC 60589 32 100.0 35 ................................ TTCAATAACTGGATTTCTTAACACATGGGATGCTG 60656 32 96.9 35 .....C.......................... CTGTATTCTTACCGTCTTTAGTGTAAGTCCACGCT 60723 32 100.0 34 ................................ TGCGTTCTTGCTCCGTGGCTCTCGGTTTGTGCAG 60789 32 100.0 34 ................................ GTTTGGTCTTATCTTAATAAGCACGTCATACAAT 60855 32 100.0 36 ................................ CATCAGATTGCTGCACAGATGGCAGGAATGGTTGGT 60923 32 100.0 33 ................................ TCTGTGTCTCTCTCATAAGTCATAAGCTTGATC 60988 32 100.0 35 ................................ TTGTCGATAAGGTCATCTGCAAGTTCTTTATTGCA 61055 32 84.4 34 ..T........T.T.A......T......... TGGATGTACTTCCGTGGCTTGATGCTGGTCTTCT 61121 32 87.5 0 ...........T................CGT. | ========== ====== ====== ====== ================================ ===================================== ================== 76 32 99.5 34 GTCGCTCCGTTCGCCGGAGCGTGGATTGAAAT # Left flank : TACCCTGTTTTTTTGTGGAAATGAGGTGATAAGAATGTTATTATTGATAACCTATGATGTTAATACGGAAACATCTGCAGGAAAAAATAGATTGAGAAAGGTTGCAAAACAATGTGAAAATTATGGCCGACGAGTACAGAATTCAGTTTTCGAATGTATAGTGGACCAAGCACAGAGCGTTAAATTGAAAGCCTTGTTGTCTGAAATAATTGATGATACAGTGGACAGTCTCAGGTTTTATTATTTGGGAAGTAAATATCAAACTAAAGTTGATCATATAGGATGTGATAAGGGGATAGATGTTGATCAGCCATTAATTTTTTGATGTTGTGCGTAATGATAGTGAACATAGAATTACAAGGTCATTCGCACCATGAAAAATATACAGCTGAGAAGCGTATCTATCTATATATGCATAAGAAACAGATTTAATTGTAAAAAGCAATAATATTATTAAGCGGTTTTGTATAGTTTTTTAAATTTTTTTGTGCAAAATTGCT # Right flank : TTACAAACGAGGTGCCAGGTGCAAATGAACCAGATATTAACAAAATATGAATAAGTATGTTCAACGTGCACATGACACCGAGAATTACAGGCGATGTAGTGCATATCTAAAGTGCAAATTTACAAGACCGCTGGACAAGTAAATCATTGATAAACAGGGAGGATTTAAGTGGGCGTGATAATACAAATACTTTAAAATCCGCCATCTACGGTCTTGCCGTAGGCGATGCGTTGGGAGTTCCGTATGAATTTAAATTCAGGGGCGCATTTGAGTGTACAGATATGATAGGCTATGGTACGCACAATCAGCCGGAGGGAACCTGGTCGGATGATACCAGTATGGCGCTTGCCACTTGCGCCAGTATCAAAGCGTGTGGCAGAGTTGATGTGGACGACATCAGAGATAGATTCCGCAGATGGCTAAAAGAAGGAGCATATTCTTGTAAATGGTGTGCCGCTTGCAGAGGCAATAATGGAACATGTACCGGAAGGTTCAAAGCT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGTTCGCCGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //