Array 1 50841-52273 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTSX01000019.1 Chryseobacterium sp. SN22 NODE_19_length_107660_cov_18.085741, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 50841 47 97.9 30 .....A......................................... CCAGAATTCGCCATTTACAAGCGCATGAGG 50918 47 100.0 30 ............................................... AAAGAAAGAGCTCCGGCAATCATCCCTTCA 50995 47 100.0 30 ............................................... AGGATGTTTATGGTGAATTGCAGCCAATGA 51072 47 100.0 30 ............................................... CATCGTTTTCTTTTTTAATCTCCCCCGGCA 51149 47 100.0 30 ............................................... GAACCTTGTCTTTGACACCGACGATTATTT 51226 47 100.0 30 ............................................... TAACCCAAGAGAGGATATATTCCAGGTGGA 51303 47 100.0 30 ............................................... CAATCTGTGGAAGAAAACACTATCCGGACG 51380 47 100.0 30 ............................................... AAGCCGCTGCGCTATTTATACGGGCCTATT 51457 47 100.0 30 ............................................... AAGTGGGGATTAATTCCGGCTGCCTTTAAT 51534 47 100.0 30 ............................................... GAAAAGACGCTATTCCGCTTTCATCCTAAA 51611 47 100.0 30 ............................................... TGAGCCCGCAATGCTTCCGCTTCGCCCAAA 51688 47 100.0 30 ............................................... TACGCGAATATTAACCCCTGGTTCGTCAAC 51765 47 100.0 30 ............................................... AGTAGTATTTCTTTCCATCTTTAAGGTATA 51842 47 97.9 30 ...............T............................... AATCGGCATTTGGTACCGGTAATGTAAGTT 51919 47 100.0 30 ............................................... GTTACGGCCACTACGCAAAACATCGACGGA 51996 47 100.0 30 ............................................... AAATAATACCAACTTGATTTTCATAAAAGA 52073 47 100.0 30 ............................................... CTGTTTTGTAATGTGAATATCGGGGTACGA 52150 47 100.0 30 ............................................... GTCTTTGTATAATTCTTTCAGGTATGTTTT 52227 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 99.8 30 GTTGTGAATTGCTTTCATTTATTCGTATCTTCGTGATACAACACAAC # Left flank : GGTTCCCTGCCTCCCCGATAATATCGGCTGACCGCCCGGCATATGCCACCGCCTTTTCCACGTCCCCCGCCTGCTGGTACAGCGACGCCGACAGCATCAGGCTCTTGGTTTTGAAATAAGGGGTCTCCGAGATTTCATACAGGGAATCGGCAACCTTCAAAGCCTGGCCGAAGTCCTTCTGAGAAGTCTCCAGATAGGTTTTTGCATAGACCGCCTGATAACGGGCCGGATCCTGTGCCCGAAGCGCAAGGAACATCAAAAAAAACGGAATCAGGAGAATTTTATGCATCATGGCCGCTGACCTAAACTAACAACCTGCAAAACTATCACTAATAATTGAATTGTTGAACGGATGAAACGGAATATTTCGGGGAACAGGGTGAAATTTGATACAAATTCCCTGATTTAACTTTTATGCAGATCATCTTTGGACTATTTCATTTGATTGTATCTTTGGGGTACAACACAACGGGTTCGAATCCCGTATTCTCCACAAGGTG # Right flank : CCTCAACATTTAACCCACTGAATTGCAGTGGGTTTATTTATTGATTAGGATTGAAAAAATCAGAAGAGTTCGAGCTGTTGGAAGGTTGGAGGCGGTTCTTCTTTATTCCTGGCAAAGAAAATCTCGATATCGCCGAACTGTTTGTCCGTAATGCACATAATCGCTACTTTTCCTGCTTTAGGCAGCATAAATTTTACACGCTTGATATGCACTTCCGCATTTTCACGGCTTGGGCAGTGGCGTACGTACATGGAAAACTGGAACAGCATAAAGCCGTCATCGATCAGCGCTTTTCGGAAACGGTTAGCATCCTTCATATTCGCTTTCGTTTCGGTTGGGAGATCATACAATACTATTACCCACATAATCCGGTATGCATTAAACCTTTCGGCGTTCATATTTTTATTTGTAAAATGTACAATGTAAAAAAGTAATTCAATTCATCAGATTAGTTCGGGATAAGAGATCAGCCGCTTTTCTCCCGTGTAACATTTATAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTATTCGTATCTTCGTGATACAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //