Array 1 505966-509715 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZJW01000004.1 Salinicola acroporae strain LMG 28587 Salinicola-acroporae_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 505966 28 100.0 32 ............................ ATGACCACAGCAGAACACGCCCGGCTACGGCT 506026 28 100.0 32 ............................ GCACCGCCGAGGAAGTGGCGGTTGAGGCGATG 506086 28 100.0 32 ............................ TTCAAGCTCATCGACTACGCGGGCGTGAAAGT 506146 28 100.0 32 ............................ TCGACCACCGCACTCGCAAGACCACCAGTGGT 506206 28 100.0 32 ............................ TGCCCGCCTACACCGAAGACAGCGCGGCCGGA 506266 28 100.0 32 ............................ GCCTTGCTGCCGGATGGCTGTGCGTGTACTGC 506326 28 100.0 33 ............................ GCCGAAAAATGCCTCTTCATGGTCAGCGACGGC 506387 28 100.0 32 ............................ GTCGGCAAGCGTGACGGCAAGCCGCTAAAGGC 506447 28 100.0 32 ............................ TACACGCCAACGGATACCGCAAACCTGCCTGA 506507 28 100.0 32 ............................ GATGAACGGCTACCGCCGTTGCGCCGGATAAC 506567 28 100.0 32 ............................ GGAATGAGAACCATCGACAACAGCTGGAATCG 506627 28 100.0 32 ............................ GCCATGCAGCGCGCTAGCGCATTCACCCCATC 506687 28 100.0 32 ............................ GCCCACACGGCAAAGTCGTGTGGCCACATGCT 506747 28 100.0 32 ............................ GTCAGGGCGGCGGCTTTGCGCTGCAGCCCAAC 506807 28 100.0 32 ............................ CTGTTCCAGGCGCTCGACGAACTGGCCGAGCA 506867 28 100.0 32 ............................ AGAGCGCGGCGAGAACGCGCGCCACTCTGAGT 506927 28 100.0 32 ............................ GAACTGACCGGATGGACGCCGCGAACTATCGA 506987 28 100.0 32 ............................ ATCGGATTGCCAGAAAACACTCAGAGACCAAG 507047 28 100.0 32 ............................ AGAACGAACCATCAGCATCAGCCACGGATATC 507107 28 100.0 32 ............................ TGCTGAAGAAATCGGACCTGCGCGACGCCGGC 507167 28 100.0 33 ............................ CGAACAGAGCCTGGCTGGGCTGAGCGCTTCAAG 507228 28 100.0 32 ............................ AATCGCCCTGATCCTCGGAAGGCGGTCGGCTT 507288 28 100.0 32 ............................ AGTCTGTCGAGTCAGCTTCCTGCCACTGGAAG 507348 28 100.0 32 ............................ TCTGGGCGTATTCGGACGAACAGGGCGCAATC 507408 28 100.0 32 ............................ GTAATGAGGTCCGCGTGGTGCAAGGACGAGAC 507468 28 100.0 32 ............................ CTCATCGACCACATCTACGCCGATCGCTACTG 507528 28 100.0 32 ............................ GAAAGAAAGCCCATCGCCAGCAAGGCGGGCTC 507588 28 100.0 32 ............................ GACAAGGAGTGGAACTCAAGCGACGTCCTGGC 507648 28 100.0 32 ............................ CCATGCGCCCAAAGGCGCTGTTGATGGCCATG 507708 28 100.0 32 ............................ ACGAATGTTAGTGTAAACCTTACGCCCTTCGG 507768 28 100.0 32 ............................ GCTACGTCATGCAGCACGATACCAAACAGGAG 507828 28 100.0 32 ............................ CTCATCAAAACGTCTTCTGCTAGCTCCCGGAT 507888 28 100.0 32 ............................ ACCGCCAAGGGCAAGCGCTCGGAAGAGAACAC 507948 28 100.0 32 ............................ CCAGCGAGTACATCGCGCTCGAGTGGAGCGAT 508008 28 100.0 32 ............................ TTCTCGACCAGATCAGCAACTGGACGCATTAC 508068 28 100.0 32 ............................ TCGGTGCTGCGGCGATCGCTGCATTCACCATT 508128 28 100.0 32 ............................ TGTTCGAGCTGTTCCGTGCCAAGTTCGGCGTA 508188 28 100.0 32 ............................ ATTGGCGATGATCGTCGCCAAACCTTTCCCGG 508248 28 100.0 32 ............................ CTGCCCTGCTGCTCTGGACATGAGCGGCCAAT 508308 28 100.0 32 ............................ ACCGAGACCTACGCCGGCCAATACTGGCGCGG 508368 28 100.0 32 ............................ TCAGTATCCGTCGCTCTCGTCCGTCATTTGCC 508428 28 100.0 32 ............................ ATCATTGGGACAGACCAGCGAACAACGATTCA 508488 28 100.0 32 ............................ CTCGATCATTCTCGCCCTGCACCCAATCCATA 508548 28 100.0 32 ............................ ACCAAGGCCCGCAAGGTGCCCCCGGTCAGCCC 508608 28 100.0 32 ............................ AACGACATCGCGATCACCGGGCGCCAGCCGAG 508668 28 100.0 32 ............................ TATCTGCTGTACATGAGACACCTTGGAACGGT 508728 28 100.0 32 ............................ TACCAGATTGCCCCTGAACCGGGTAATTACAG 508788 28 100.0 32 ............................ AGGTGCGGGTGTTGATTTGGTAATAGCCTCGG 508848 28 100.0 32 ............................ GAGGGGATGGCCATGTAGCGATCCACGATGGC 508908 28 100.0 32 ............................ GCCCTACGCAGCGCGAGACAGTACCCGGCACG 508968 28 100.0 32 ............................ ATCGCCAAAGAGACGGGTAAATAACGATGACT 509028 28 100.0 32 ............................ ATATCACCAAGATCAAGAGAAACATCATACAT 509088 28 100.0 32 ............................ ATATCCCCAAGGCTGCGAGAGCTGACCTCAGC 509148 28 100.0 32 ............................ GACGGCCGCAAGATCAGCGCCGACTGGCTCAA 509208 28 100.0 32 ............................ AAATCGGCATCGTGATAGACAACCAGAACACC 509268 28 100.0 32 ............................ AATGCGAGCGCCTGGTCGGCGGTTTCTTCGAC 509328 28 100.0 32 ............................ AGCAGCGCTGGGCAGCTACCTGATGACGAGAA 509388 28 100.0 32 ............................ ATGACAACGAACTTGTGAATCAAAAATTTTAT 509448 28 100.0 32 ............................ TTGACGAATGCACGCTTGTGGCGTTCGATCAG 509508 28 100.0 32 ............................ ATCAACACCACGAAGCCTTGATTTCTGACACG 509568 28 100.0 32 ............................ CAGTCTTTCGTCTATGGTTCCGACGCCACCAC 509628 28 100.0 32 ............................ AGGTCGCCCGAGTGAAGCAGCCCTAGTAGTTC 509688 28 82.1 0 ......CC.............C..T..T | ========== ====== ====== ====== ============================ ================================= ================== 63 28 99.7 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGAGCCTGACGCAACTCATGGTGCAACCCTGGCTCAATGGCATGCGCGAACTCGTCGAGACCGGCGACATTCTGCCAGTACCCGACGGAGTCCTGCATCGCGTGGTCAGGCGCCGGCAGTTCAAGACCGGCAACGACAGCCAGGTGAAGCGCTACGCACGGCGTCACGCTATCGACCTCGAAGAGGCGCGAGCGAGGTTCGCAAGCAGCAGCGAACCACGCATTACCCTGCCTTTCGTTTCACTCAACAGCCGGTCCAGTCAGCAACGCTTCGCCCTGTTCATCGAGCACGGCGAACCGCAGCCGACACCGGCTGATGGCTCCTTCAATCAATACGGCCTGAGCCAGGGGGCAACTATCCCCTGGTTCTGACCCTTTTTTCGCGCGCTTTTATGGCACTCGGAAAAACAAGGGGTTAGCGGCGCATCCGCAAAAAGGGAGGCGTCGCACTTTATGGCTATTGCTCTTTAACAATCAGGGTATTAGCTTGGAAAAGCTCTA # Right flank : TGATATCGACCGAGGGAGGGAGCCGCTGGACGAGACCTCACTCCTCCAGCGCGTAATCGATCGTTGTCACCACCCTAACCCGCTTGATGTCGGGGGTGTAGCTGTCGACATCCTCGATCGAGAAGTAGCCTTGGTTGGCGCTGCGGATTTCGCCGACGCGACTGCCTGAGTCTCTGGCGAACTGCTGGGCGACGCCGCGTGCATCCTTGGTGGCTTCGGCGACCATCTCCGGCTTGATGTCATTGAGGCCGGTGAACAGGAATTCGGTGCGGTAGTCGTAGTTGGGTGATAGCACGACTCCGGCGCGGACCAGCTCTCCGGTCTGGGGCATCGCTTTCTTGACGTTATCCACCGCCGGCGTGCGCAGCAGCACCGTGGCTTCGGCCTGGTAGCGCTCGTCGGGCCGGTCGGCGCCGTAGAGATTGGCGAAGCGGTCGGTCACCTGGGGCGAGGTCACGGTGATGTTGTCGGTCTGGAAGCCTCGTTGGGTGAGAAACTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //