Array 1 90049-88031 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSPQ01000009.1 Algoriphagus marinus strain am2 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 90048 46 100.0 30 .............................................. GAGATCCTCCCAGAAGGGGTAAGAATCCTC 89972 46 100.0 30 .............................................. GAGATCCTCCCAGAAGGGGTAAGAATCCTC 89896 46 100.0 30 .............................................. CTCCTGGAGCTTCTTGCGCTTGTCCAGGAT 89820 46 100.0 30 .............................................. TCGAAGCTCACGGAGCTGTTGCGATAGAGG 89744 46 100.0 30 .............................................. TAGTAGCTGGTTTTGCCCTGGTATTCAAGA 89668 46 100.0 29 .............................................. TACCCTCCCTCTTTGATTTCGGCACTATT 89593 46 100.0 30 .............................................. TATCAGGCTCAAATAAATTCTTGGCTATAG 89517 46 100.0 30 .............................................. CAATCGCTGATTTGGCTGATCCTGGATCTA 89441 46 100.0 30 .............................................. CTATGAAGGATTGCTCGAGGTGCACGCCGT 89365 46 100.0 30 .............................................. AGGATGATCTTTTTTGAAATCAATATCCAG 89289 46 100.0 30 .............................................. GGGATGGAGGCGATACAGCGACTGCCCGAA 89213 46 100.0 30 .............................................. CCACGTGATTGATGGTGCAACCCAGCCTCT 89137 46 100.0 30 .............................................. GCGGGGGTTTATAATTTGTGACGAACTAAA 89061 46 100.0 30 .............................................. GAGAGCATAACAGCATATCAGTATCCATTC 88985 46 100.0 30 .............................................. CATCGTACTGCCAGACCTTCCAGACTATCT 88909 46 100.0 30 .............................................. GGGCGCTGTCAATTGCTGGATTTATTCCGG 88833 46 100.0 30 .............................................. CATTGTTACCGGTATGGATTCCAAAATTTC 88757 46 100.0 30 .............................................. AACTTCCTTTAAATTGATTCCGGCCTCAAG 88681 46 100.0 30 .............................................. TATTGAGCAGGTTGAGCTTGTCAAAGTGCT 88605 46 100.0 30 .............................................. GCGCAAGGTTAGTTGCTGCATTACCTACAT 88529 46 100.0 29 .............................................. CAGACCCTCGATCTCGATCTCAAAATGGG 88454 46 100.0 30 .............................................. AGTACCAGGTGAAAAGACCCAATTTTCGAT 88378 46 100.0 29 .............................................. GCAAAGCATTTTAGGGCCTTATATTGAAG 88303 46 100.0 30 .............................................. CTTCACCAAAGTCGGAAATCCCACCAAAGG 88227 46 100.0 30 .............................................. GCGGTTGATTGGTAATCCAGCCTGAAGCAT 88151 46 100.0 30 .............................................. CATTATTAAGCACGGGCGTTCCCTTGCATG 88075 45 91.3 0 .....................................-.C..A..G | ========== ====== ====== ====== ============================================== ============================== ================== 27 46 99.7 30 GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : CAGAATATGCATGAGAATTATTATTCAAGGCTTAACCAATACCGCAGTTTGTGGGTCTTAGTATTTTTTGATCTACCCACCGAGACGAAAAGAGATCGGAAAATCGCTTCTTCTTTCCGAAAGAAATTGTTGGATGATGGGTTTGCGATGTTTCAATTCTCCATATATATGCGATTCTGTGCAAGTCGGGAAAATGCAGAAGTACACACCCGAAGAGTAAAAATAAATCTCCCACCAAAGGGGAAGGTGGGTATTATGCAGATTACAGATCGACAGTTTGGGATGATGGAATTATTTCATGGGAAAACTATTGCAGAGAAAGAACAACCTGTTCAGCAGTTAGAACTTTTTTAGATTCTCTGTAAACTTTTCCAATCCGCCTCGGTGAATTGGAAAAGTAAATGCCGGGTTAGCACAGATACTGCTCACCAAAAGATCCAATTTTTATTTTCCTAAAAAGAGCATAAAAAACAGCATACCAGCCACTTATCGTGGGGTAT # Right flank : TTGATTCTTGTAGAAGGTCCACTATCTTTTTATATTTCGCTATCTATCTTCCTTTATTTTTTTTTAATTAGCCATAAGAACCCAATACAAAAACCATGGACAATAATAAGCGACGCGAATTTTTGAAATCAACTGGCCTGATGGGGCTGGGATTATTTGGAGCAGGATCAGCCTTCGGGATGGATCTGAATAAACTTCCTACCGAAGCAGCGAAGGGACTTAATCGAGTTCAATCCTTTAATATGTCTGGTTTTGCGGCTCCCAAGCTGGAGACTGTCCGGGTTGGAATCGTTGGTTTGGGGATGCGTGGTCCGGGTGCAGTAGATCGATTGAGTAAAATCGAAGGAGTAGAGATTAAAGCACTTTGTGATTTATTACCAGAGCGAGTGGAAAAAGCCAAGGAGCAGTTGAAAGGTACTTCACACCAGCCTGAAGGCTACTCTGGAAATGTCTATTCCTGGAAGGAAATGTGTGATCGCACAGATCTGGATCTGATCTAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //