Array 1 10123-8900 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOK010000062.1 Streptococcus sanguinis strain SY16 Ssanguinis_SY16_Nina_Sia_YES_61, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10122 36 100.0 30 .................................... GAATTCGGCATTACGAACTTCATGAACTTC 10056 36 100.0 30 .................................... TAGCCATATAAGCATAGATTACTTCCGAGG 9990 36 100.0 30 .................................... ATATTATAGATATATCAAGTCGAGAGCTTG 9924 36 100.0 30 .................................... CTGGAGGTCTGCAAGACATGACTGACCACG 9858 36 100.0 30 .................................... ATTTTACAGTAAAACTGTCATAGATTGACA 9792 36 100.0 30 .................................... CATATGCGCAAAATTAAATCATTTGACCCA 9726 36 100.0 30 .................................... ATGTTGTCAGGCAATGAGATGACAGCTTCT 9660 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAACG 9594 36 100.0 30 .................................... AAATAATCATAATAGCTTGGTGCATTTGTA 9528 36 100.0 30 .................................... TTCATTATATAATAAAGTATCAAATTTGTA 9462 36 100.0 30 .................................... CGCAAACCAAAGCAGAATTGCGATACTGTT 9396 36 100.0 30 .................................... TGGCTACTGCGATGTTTAAAGGTGGCAACA 9330 36 100.0 30 .................................... AACCCCACTTGAAGCGGTTTTGGAAGTCTC 9264 36 100.0 30 .................................... CTGCTCCCTTTCTAGTCTGCATCAAGAAAC 9198 36 100.0 30 .................................... CCAGTCATGTMAAATCTTGCTTAGGTTACG 9132 36 100.0 30 .................................... CGAGGGTACAAGCTTACCGCCTTCCTCTTT 9066 36 100.0 30 .................................... TGGTAATGCGTGGGTGTTTGCGACAAATTG 9000 36 100.0 29 .................................... AAAATTTTGTCTAACATCGTTATCGTTAA 8935 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAATATAATGAATGTTAATATTGWTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCTATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : AGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAAAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGAAGATCTACAGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATCAAGGAGATATGGCGAGCGTTGGACAGGTAGGTGGCGTCTTGTTCAACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCGATATTTTGATTGTGGAGGACAGAAATCTTCATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //