Array 1 37113-39723 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJMI010000009.1 Bifidobacterium pullorum subsp. saeculare strain An831 An831_NODE_9_length_57360_cov_99.6711, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 37113 36 100.0 36 .................................... ACGACAGTGTTGTTCAGCAGGGTTATCTTCTGCCGT 37185 36 100.0 39 .................................... CACTTGGAGATGCCTGCGTAGTGGACGCCGAACATTCCA 37260 36 100.0 36 .................................... CGTTATCTCCTTATAACGGCAGGCGCATGGCCGAAT 37332 36 100.0 36 .................................... CGTGGCCGTGCTGTTGGATGGCAGCATCGGCTGGAA 37404 36 100.0 36 .................................... CGCGGTTTGGTTCGCCTGGATGTCCTTCTTGGCCTG 37476 36 100.0 35 .................................... TGGCGTGTCCATATGGACAACGATCTGAACGACAT 37547 36 100.0 36 .................................... ATCAAGGTAGGCCACCGCTACTACTTCAATCCCGAT 37619 36 100.0 34 .................................... ATGTTGGTGGTGAGCGTAACGGTTTCGCCGTCCA 37689 36 100.0 35 .................................... ACCAATCCTGACTGCGTTCGTGCAGTCGAGCAGTG 37760 36 100.0 34 .................................... CGCTACCAGTACGACGCGGCCTTCCGCGCGCAAT 37830 36 100.0 38 .................................... ACGCGACGTCATCGTGTGCGTCGCAGAGTAGGAAGGGT 37904 36 100.0 36 .................................... CTGGTGCAGGTGCAGCACTACCTCGCAGTCACCGGC 37976 36 100.0 38 .................................... TCTGGGACATCCCGGAAGTCATCAATGCGATAGGCGAC 38050 36 100.0 35 .................................... TACCCTATCTACGATGAAGGCCATAGGGCGGAGCT 38121 36 100.0 35 .................................... ATTCCCGGCGAACATAAGTGGGTGCTGAACAGCTT 38192 36 100.0 34 .................................... ATGCAGTCGACGCATATGCAACCCTCACACAGCG 38262 36 100.0 36 .................................... AACCCGCTGGACTCCATGGACATGACAACGGATAGC 38334 36 97.2 34 ...A................................ TGGAGATGCGAGACCACGAGTGGTGGGAGGCGGC 38404 36 100.0 38 .................................... ATGGCAAGCTTAAGCTGGAACGTCGGCGTCTTAGCCTG 38478 36 100.0 38 .................................... GACAAGTTTTTCCGGTTTCACGGTGTTCACGCCCGAAG 38552 36 100.0 35 .................................... TATGAGCAGGGCTACCGTGCCGGTTTGACGCTCCC 38623 36 100.0 36 .................................... TGCGAGATCACGCAGTCCATCCTCATCGACAGAAAT 38695 36 100.0 35 .................................... TTGATCGTGTCGTCGGTCGACGTGTCGGGGGTCAG 38766 36 97.2 37 .C.................................. ATGGCCATGGGCACCACGTTCCCCGGCGGCATCACCC 38839 36 100.0 35 .................................... TGGAAAGTCGTCGCCGACATGGGCGGATGGCGGCT 38910 36 100.0 34 .................................... GACGTTGGTGGGCACGGTGATGTCGGGCAGGCTG 38980 36 100.0 34 .................................... CCGGGGCATTTCACGCACTGCCTGACGGATTGCG 39050 36 100.0 34 .................................... CGGCCATATTCTTGATATCCTGATTGTTGGCGTC 39120 36 100.0 36 .................................... TGGGATATGGACGGGTCTTACGGCGCCCAGTGCTGG 39192 36 100.0 35 .................................... TGCTCAAGGGTCATGCAGACGAGTTGGTTGGCGAC 39263 36 100.0 35 .................................... AATGACTGGTAGCGGGATGTGCGTCCCAAGTCGAT 39334 36 100.0 34 .................................... ATCACGTTGGGCGGCTTCGCCTACACGACCTCGC 39404 36 100.0 38 .................................... CGGCAAAGCAGGGCGATGCGCGACTACCAGCTGGCGTT 39478 35 91.7 39 ......................-.T...G....... GACCCGCTGAAGGATCCGGGCATCGACCAGTCGCTGCTC 39552 35 77.8 31 .........T.C..T........CT...G...-..T CGTCCCGCGCACGAACATGACCGGCCTCGCT 39618 36 80.6 35 .........T.C..T.......GC....G..A.... TCAAGCCGTTGCACTCCATGGCGGATCAGACGCGG 39689 35 72.2 0 ......G.A..G..T.-..T..GCT...G....... | ========== ====== ====== ====== ==================================== ======================================= ================== 37 36 97.7 36 ATTGCGAAGCTTTACGCTTCGCAACTTCATTGAGGA # Left flank : TGCTGATTTGCTTGCTGGGAACGGGAGCGACTGCACGTGGGGACATGACGTTCCTCGGTAGACAGTCGTATCAGGATGTGGCCATTCCGACGATTATCTGAGTAGCTGTTCGGATGGGAAGTGGGATGGCGAGATGTTATACCATCATGATGCTTGACAAGTGAATAGTGGATAATCGGTAGTAGATGGGGCGGACAGCAGAGCCTGCACATGGGATGCGGAGATTACCCGGTTCCTGCGTTGTTTCAATGTTCGTCTCACTCTGGCATTCGCTCGCGCGCGTGCCAACCGTGGCCACCATCTCGCCGAAAAGTGTTTCGCGTGCTTATGCTGTTGCGAGAGCTGAATCATCCGGGAGCGGGTGCCGAAGCTCTCGCAGCAGACGTAGGTGGGCGGAAGCCATGTCCGCCGTACAATGTGCATCAATGATGCCTGCTACAACGAGGTCTCTCGCAACTCGCCGTTTTGCCCATGTGGTTTCAACTGCTTAAACTATGGCT # Right flank : AAAACGTGTATCGTTTGATGCATGACGACGATGAAGCAGGTGGCGCAGAAGGCGGGAGTCTCGGTATCCACGGTGTCGTTGGTGCTGAACCATCGCGACGCAGGCCGTGTGAAGGCCGAAATCGCCGAGCGGGTGCGGAAGACCGCGGAGGAGCTGGGGTATCGGCCCAATCCGCTGGCCAGCAGTCTGCGTACCAGCAGGACCCATATCCTAGGCTTCATCAGCGAGGAGGTCGCCACAACCCCGTACGCCGGCGGCATCATCCTCGGGGCGCAGGACGCGGCCAGCCGATTGGGATACATCATGCTCACCGTCAGCACCGACGGCGAGTCCGACGAGGGTACGGAGATCGCCGCGCTGAAGCGCTACGGCGTGGACGGTTTCATGTACGCCAAGATGTCGAACCGCATCACGCATGTGCCGGATGCCCTGAAGGACGCTCCAGTGGTGCTGGTGGACGCCACGGACGCGGAGGGGCGGATTCCCAGCGTGGAACCGGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCGAAGCTTTACGCTTCGCAACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //