Array 1 47043-45456 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVMG01000001.1 Yersinia wautersii strain WP-931201, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 47042 28 100.0 32 ............................ TTTCCCCTCAATATCGGGTTCCCCTTTAAAAT 46982 28 100.0 32 ............................ AGCAATAAACACTCATTAATAATACAGATAAT 46922 28 100.0 32 ............................ ATCAGGTGACTCAACTACTGCGCCAGAGCAAT 46862 28 100.0 32 ............................ ATTGCGGTGGGGTCGACCGAGAAACCAAAGTC 46802 28 100.0 32 ............................ AACCGCAAACGGCTCTTGGGAGTGGAATTACT 46742 28 100.0 30 ............................ TGATGTCAAACCCTTCACGTCTGATGTGGC 46684 28 100.0 32 ............................ ATGAAGCCAAGATGTTCCGTTGCATGAACTTG 46624 28 100.0 32 ............................ TTTGGCGCTGAAGTTACCGTATTATCAGTTGC 46564 28 100.0 32 ............................ ATCAAGTATCGATAACCCTCCCGTCATGGCAC 46504 28 100.0 32 ............................ GATAACTTCACTAAGGCTGGTATCTATTTAAA 46444 28 100.0 32 ............................ TCTGGTGAAACAGTGGACGGTCGGGTGATAGA 46384 28 100.0 32 ............................ ATCACTACGACGGCGAGGTAAAGCATCATGCA 46324 28 100.0 32 ............................ TAAGACTACTAGATGAGGTGATGTATGGAACG 46264 28 100.0 32 ............................ AACTAACTGGCTTAATTCGACTTGCGTAGGCT 46204 28 100.0 32 ............................ GATGTTACGGCAGTTCAATAGCACTTCACATG 46144 28 100.0 32 ............................ ACGGAGAATTAACCTCGGCCTCATTATCCTTT 46084 28 100.0 32 ............................ ATTTAGCCCTGCTGGCCATATCAACATATGGT 46024 28 100.0 32 ............................ GCTCTAAATATGAATGGCAATCGGGTACGTAC 45964 28 100.0 33 ............................ GGCCGACGGCTACCAACCGCATGAAGAGTCAAC 45903 28 100.0 32 ............................ GCTCTAAATATGAATGGCAATCGGGTACGTAC 45843 28 100.0 32 ............................ GTGGTCACGGCTGGCGTGGTCAAGCCCCAACA 45783 28 100.0 32 ............................ CAAGCCAGGCGCGCGGGGGGACTGTGATTGTC 45723 28 100.0 32 ............................ GCAGGGGCAACACTGGCCCACATCCAAGCTGA 45663 28 100.0 32 ............................ CGAGTCCCGCGACGCGCTGGCAGAACTGCTTA 45603 28 100.0 32 ............................ AACGTGATATTAGAGACATGAAAGTAGGTGAT 45543 28 100.0 32 ............................ AGAGCATTGTGATGAACGCCTTCACGTATAAA 45483 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CCGGCCTTGTTGGCACAACGACGCTACTGGCAGCATTTTGCTACGGTGATAGCGCATGCTTTTGCGCTTAACCCGCAACTTAAATCGTTGGCAACTGCAGAGACACTATTGTGCCGTTGCGAGGATGTGGCTTTAGGGCAGATTGTCGGGCAACGGGATTGGGTGGCCGCCAAGCTGGCTAGCCGCTGTGGCATGGGGGCTTGTCAGGGGAAAGTCTGCGCCACCGCTGCCCGTTATCTGTTTGGCTGGCCGTTGCCAACCCCCAGAGTGCCATTGACGCCTGTCAGGCTAGAAACATTGGCGGCGACTCCGCCGTTCTCCTCAGAAAAATAATCATTAGGATCCGGTTACATCCCCACAGGTTCTTGTGACCCTCTTTTTTTCACTATTACTAACTTATTGATTTTTATACTGCTCAGGTGTTTCACTAAAAAAAGGGTTTTTACGCATTTTGCGCAATTGCTAATTGATAAACATCAGGTTATCCGTATTATCTTACT # Right flank : TGTACGTCGCCTTACGTTAGTTGGGGAGTGGCTTCTGGCTTCGGTGTGGTTGTTTTAAAATGATCCCTTTATTCTGAGTGTTTTTGCTTTCTATGGGCCAACTAACTTGAACTGTGCCAATCATAGACAAGACACCTTGCGGTAATACACTGCCATACGTGAAGTTACTAGCACTTACGCGAATTTAAAACCGGCCACAGCACATGATGAGTATGGGGGTGTGTGAGTAAGGCGATAAAATACAGCGCCGGGCTTTCTTGCCCGGTGTGAACAAAACCGCCTCTCATGGGGCAAACCAGACTCTCTATCACAGTTTAAACCTATCTCGCTCTTTGTATTTCGCAATGAGAAATGTGATCAGTGCTATCAATGCGACCAGTAAAAATAGATAGCCTAGGGGGATCAAGAAGAAAGGTTCATGTAAGACACCATCCTCGTCAATATAGCTGCCCGCCAAAGCCTTACTAATAAAACAGCCAAGCCCGGTGAGTCCAAAAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 34099-35206 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVMG01000014.1 Yersinia wautersii strain WP-931201, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34099 28 100.0 32 ............................ TTAGCGAAGAGAATCAACAGTTGAAGGAGGAA 34159 28 100.0 32 ............................ GACATGCAAACACGTCAGCGTGATGTTGCCGC 34219 28 100.0 32 ............................ TGATGGCATTAGAAGTAAAGCTCGAAATGGAT 34279 28 100.0 32 ............................ ACGCGACTCCATATTCATGAGGGCGTCGCATC 34339 28 100.0 32 ............................ GTTTGATAATGATGACGTGATAAATAGCGTTA 34399 28 100.0 32 ............................ AAAGACCGAATGCAATGGCGCAAGAAGATGCT 34459 28 96.4 32 ...........T................ GTGAAGGAATAACGCCCCTGCATGTTTATATG 34519 28 100.0 32 ............................ AAAATGCGGGTAACGCTGCCCGAGGCCCAACC 34579 28 100.0 32 ............................ TACCGAATAGCCTTGGCGTAACGCCTCCCGAA 34639 28 100.0 32 ............................ CTGAATGGAATGTGATCGCCTGTTCATACTCT 34699 28 100.0 32 ............................ ATCACCTTTAAGAACTACAGCACCTAGTGAAC 34759 28 100.0 32 ............................ ACAGGCCCCCGTACTGGTCCCGGCATTGGGAA 34819 28 100.0 32 ............................ AGACCGCGCCGCTGCTGGGCTGTTGCTGTTTG 34879 28 100.0 32 ............................ AATAAATACCCGGTCCCCCTGCTTCGGTGGAG 34939 28 100.0 32 ............................ GCATCTCGGCGGGAACAAACCCCATCAATGTT 34999 28 100.0 32 ............................ GGTCGAAAATGGCGCACCGTTCGCACTGATGC 35059 28 100.0 32 ............................ GTGATGGGGATTTCTGCCGGGCGGTCAAACAG 35119 28 100.0 32 ............................ AAGTCCCAACAGAGTTTTGTAGTAATTAATGG 35179 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AGGTCGACGATGTGCTCACGCCGCTTTAACGTATTCATACGCCAACCTTCAACCTTTGGTTATCCGTAAAGTAATTACAACAAAGAACGCCAATCAGAATTGCCACCTGGCTCACAGTACAAAACTTGCTATAAAAACCCTAAAAATCTTTCGATTGGTCATCAATCGAAAGATTATGCTAAGAATATAAGAATGGATAATGGGGAGTGAAACCAGAAATGGCGGAGTATTCGATTCAGTAAAGGGAAAGAAAGTGAAAAAATATAGGCTAAGGGGAGTGGTTATCGCTTTAAAATCAGCCCGTGATAAAGATCACAATAATAACTCATGGGGATTCTTAGCCTATTCACATCAGGGGAATCATTTTTTAACCCTATTTTTTTAGCTATGGCTAACTCATTGATTTTATATCCTGCTTACCGAGGGTTAAAAAAAATCATTTTTTACCCTTTGGCGAAATAATTATTTTACAAACAGTCTGTTACCCGTATTATCTTACT # Right flank : AAAGAAGGCCCAAGCGTTGATTACGAAAATGTTTCGCCGGGCACGAAAAGTGTTGCCAATATGTTTGATAATATAATGCATTACTAACTCTTTTTTATGTGGTTTTACCCCATGTCTCAGCCAGAGATAATAAAAACACCCATTAACGGAATGGTAATTAGTGTACTAATTGCCATAGATAATACATTTCCAACATAAGGATGAATATCACTAGGGAGTCGGTCTGATATAGCCGCTGCTAAAGGAGGGGCTATTAATGCACCTAGTGTGGCCGCCATAATAATAACCTGTACTGTTCCGCCATAAACCAAGACCGCAGCAGGTGCCACCGATACAACAGGGACATATGTAGGGTACCAGCCTCGGGTGATCCATTGTTTACGCCAGACGACGACTCCGATTGCTGATGCAAGAGCCTGAGCGGTGAGTACCTGTGTTAATAATCCACTACCGTATACCGGCAGTGCTGGATTTAAGGCTACGGCTAATAGAATGCCAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 59064-58074 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVMG01000024.1 Yersinia wautersii strain WP-931201, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 59063 28 100.0 32 ............................ ATCTCGTTAATGTCATTTCATTCTACCCGCCC 59003 28 100.0 32 ............................ TGACAGGCGGCGGCATTCCTGGCATCAGTAAG 58943 28 100.0 33 ............................ TCGACTCGAGAGGTAATAAATGACCCACATCCG 58882 28 100.0 32 ............................ TTGCTAACCTCAAAATCACTCATCGCATTATA 58822 28 100.0 32 ............................ GCTGATGAATAACATCGAAGAGTTGAAGAACG 58762 28 100.0 33 ............................ AGACGGCAACGTTGCTGCCGGGGTACCACCCAC 58701 28 100.0 32 ............................ TCGGCAAAATGCGGTTCTGACCGGCTATAAAT 58641 28 100.0 32 ............................ AGCGATGCATTGTGGGCAAGTTTCCCCGGTGC 58581 28 100.0 32 ............................ TTAACCTGATTGCCTCATCATTAAGTCGCTCT 58521 28 100.0 32 ............................ ACCGGAGGATTGATTAATGAGTAAAGAGTTTA 58461 28 100.0 32 ............................ AACTCAAGGGGGCGGTGGGGGATCAACCATAC 58401 28 100.0 32 ............................ GGACCACACAGCAGAAGAATGGCGCAAATTTA 58341 28 100.0 32 ............................ AAAAACACATCGTTTGAAAATCTTGTCTGAAT 58281 28 100.0 32 ............................ GGACAAAAGGCGAGAAAGAAAGCATTGAAAGA 58221 28 100.0 32 ............................ GAGAGTTACCAGTCCAGAGGGCTCCAATTGCC 58161 28 100.0 32 ............................ CATGCAACAGCTAATTTGTGCAGGGTGGCCTT 58101 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCGATTGCTGCCCACGGCGCTGGAGGGCGGCCAGAACTACACGGTGTAGCACCAGATGGATCATCACAGAGATCAATAATATTAGCCCAATCACCATCGTCAATGACATCACATCGGAGAACTCCATCCCCAATCTTTCCAGCCACTGGCTTATTCTTTGTTGCATCACTGCTCCTATAAAGCATCAATCAAAAGGCCTTAGCCTAAAGGCTATAGGCGCAGGGGGTGCACCTGTTTACCCTTTTTTACATTGTGGTTCTGTATCTTTGTTCGATTGTTGCCCAGCGAGGGGAGAGACATATTTATAGGCTGTGGTTTATGACATGGTTTGTGGAATTGTACTGTGGTTTTATTATGAGTGATGTTCTGACCCTATTTTTTTAGCTACTGCTAACTCATTGATTTTACATTGTGGTTATCGGTGGTCTAAAAAAAGGGTTTTTTCCCCATTAGCGAAATAATTATTTTACAAACAGGATGTTATCCGTATTATCTTACT # Right flank : GTAGAGAACAGTGCTAACACTTACACTGATAAGTTCACTGCGCACAGGCAATAATCAAATTCTGGGCCATGCGCTGATGCTATTTGGGGAGCAAAATTGCGAGCGGAAGCGCATTTTGTAACTGACAACAGGGAGAATGGCATCTTTTATTACTGACTTTATGAGTATTAGAGTAGGGTAAATAGCAGGTAGCATATCAAGATATACCCGTCATACTTCAAACTGCATGTATGTTGGCTGCGCTCAATTATCCCGGTCACTTACTGGTGTAAGCGCTTGGGGATTTACTCAGTTGCTGGCTTCCTGCAACTCGAATTACTTTGGGTATAGAGAGAGTTATTTTCTGGAATAATATCTGCTAATAAAGCGCTAACGGAAAAATAGCGCGGTGGATATCCCACTAAGGAGTTTTTTGGCTATGGAAAACGCTATTCATTCCTCTGATTTGAAAACGATCCTGCATTCAAAACGATCCAATATTTACTATTTAGAATATTGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 34-603 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVMG01000097.1 Yersinia wautersii strain WP-931201, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 34 28 100.0 32 ............................ AACCGCAAACGGCTCTTGGGAGTGGAAATACT 94 28 100.0 32 ............................ AGCGGACGTATCAATATTCCAATCATTGTCTT 154 28 100.0 33 ............................ AGTTGGCGGAGTTGGGGGCGTTGGGATTTTAAA 215 28 100.0 32 ............................ TTTGGCGCTGAAGTTACCGTATTATCAGTTGC 275 28 100.0 33 ............................ AAATAGCTGAGCAGTATTCAGTTAATTTATACA 336 28 100.0 32 ............................ ATCACTACGACGGCGAGGTAAAGCATCATGCA 396 28 100.0 32 ............................ GGTCAGGAGTCACCGGTCAATGCTGGTACGGA 456 28 100.0 32 ............................ ATTACCAAACACCGCCACAGGCTCCAACGCTT 516 28 100.0 32 ............................ AGAAGCACGATGCTATCTGGAAAGAATTTGGC 576 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATGAAGCCAAGATGTTCCGTTGCATGAACTTGG # Right flank : GATAACTTCACTAAGGCTGGTATCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //