Array 1 157842-155918 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBG01000001.1 Lactobacillus helveticus strain TMW 12282 seq1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 157841 29 100.0 32 ............................. AAACCTCTGTTTTTTCTTGTAGTACAGAAAAG 157780 29 100.0 32 ............................. GTAATATCCAAGAAATCAAAAATAAGTTATGA 157719 29 100.0 32 ............................. GTAAGACCGGTTCCAATTGAAAAAATACAGGC 157658 29 96.6 32 ............................C AGAGTTAGGCAAGCAAAGCCAGTAGCGCTTAA 157597 29 96.6 32 ............................C GATCATAACTTTCATCTGTTCGAATCCCAATT 157536 29 96.6 32 ............................C ATGCATCCTTAAAAGCAAAAAGGTCATAATAG 157475 29 100.0 32 ............................. AGTCCATAGTGTCAACGACTTTAAACTTAAGG 157414 29 96.6 32 ............................C CACCTACAAATTGAATCATGCAGTCACCTTCT 157353 29 100.0 32 ............................. AAGGAATGTAAAAAATTAGGCTATGAAGTAAA 157292 29 100.0 32 ............................. GAGACAGTCAATGCTTATCCTATCTATGATTG 157231 29 100.0 32 ............................. GCCTTTGGCTTGTTTCTTGCGCCAGTCACCCA 157170 29 100.0 32 ............................. CAGGCAAAGGAATTCATGCGATTTTCAAAGGC 157109 29 96.6 32 ............................C ATCATCAAGGGTCAAAACGCCATCTTGTACTA 157048 29 100.0 32 ............................. GCTATTAAAGTCTGGACTATCTAATGTTTGAG 156987 29 100.0 32 ............................. CTGCATTAGATTGACGATTGCATAAATTTCAA 156926 29 100.0 33 ............................. AAACCAGATGCACCAGCTAGCTATAACGCCACA 156864 29 100.0 32 ............................. GCAGGTTATCAAAGAAGCGGGATACAAGCCAT 156803 29 96.6 33 ............................C TTGCAATGCTGGATTTCTAAAACCAATGGAGAA 156741 29 96.6 32 ............................C TTGCTGCGGAACTGGCTTCTTTAGCTCTGCCG 156680 29 96.6 32 ............................C CACTCTGCTAGCGTGACACGGGCAAGAGAAGA 156619 29 96.6 32 ............................C AACCCCAGTAGAAATGGAGCTAGTACACTAAG 156558 29 100.0 32 ............................. TTGTAAAAAGATATTGGACTAAGAAAAGGAGT 156497 29 96.6 32 ............................C TACAAAGAATGGCTACAAAGCATTAATGATGA 156436 29 100.0 32 ............................. TTCTTTACTGATATAATTTTACTTATTTTTTA 156375 29 96.6 32 ............................C AAGGCGGTAGTATTGAAAACTTAATGCATATT 156314 29 96.6 32 ............................C TGTGGTTATCGTGTCTCGTTGATCTTTTATCA 156253 29 96.6 32 ............................C TAGTGGCATTACTGAAAATGTAATGTCTTGGG 156192 29 96.6 32 ............................C ATATAAAAATGATGAAAGAATAGACGGCTATG 156131 29 100.0 33 ............................. TGATGGATATAGTCAATACACTATAGTTAAAGA 156069 29 96.6 32 ............................C AACAAGTTCAACGGTCCAATCGTCAGATATTA 156008 29 100.0 33 ............................. TAGAGAATATCAAAAGAAGCATCCCAAAAAGCG 155946 29 72.4 0 .....................CAACCAAA | ========== ====== ====== ====== ============================= ================================= ================== 32 29 97.5 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : AGTGATATCCCTTTTTAGCATGATGATCAACTTGAGTTAAAGCAGCATCCTTATAGATAGTAGCAATGTGCTTTAAGCGAATGATCTTAGTATTAGATGAGAGATAATCGCTCTTATTGAAAGCTGGAGCTTTCTTTTCTGTAGTAGAACTTTGAGACTGATTAGAGTTCTGTACTACTTGAGTATTTGATTGAGCATTTGATTGAGCATTGCTAACAGCATCGGCTTGAACGTGATTAGTAGAAACAATTCCTGCACCAAGCAAAACTGCCACGATAGCTGTGTTCCACTTTGTCTTTTTCAACATATATTTTCTCCTCCATAATTTTTGGAAATTCATTGGTTATTTTACTCGTGTTTTAGAAGTTTTTAAATTAGGAAGGAAGAATTTAAAATGAGTAGAAGATATAAATAAAAAAGAATAAAATAAATAGGATGAAACTGAATAAATTTTAGTTTTCATAAAATTGAAATGGCTCAATGATAAGGGATCTTTTAGT # Right flank : AACAGGACTAACTCAGCCAGATTAGTCCTATTTTTCATCTATATTAAAATATTTCTTCGCTGCATCGCTCATGCGATCAGGCGTCCAGACCGGATACCAAACAAATTCAACATCAACATTTTTTACTTCCGGCACTTTTTTAACTGCCTGAGTAATGCTATCAATTAGGTAGCCAGTTAACGGACAAGTAGGGGTAGTCAAAGTCATATTGATTAAACAGATTCCATCTTTGTCCAGATCGATTTCATAAATTAGACCTAAATTGACTACATCAACATTCAATTCTGGATCGATAACTGTCGCCAATTGATTGATAATATCGTTTTTAATTGTTTCACCGTCACGCATTTTGTCACGCATCCTTGCCAAAAATTTTAGCTTTGATTGCTTGGCCGGTTGGAGTACCGGCTAAGCCGCCGATTCCGGTCTCACGCAGGGATGCTGGCATTTGATGACCAACTTTTTTCATAGCATCGATACATTCGTCGGCTGGGATCACG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //