Array 1 2115380-2117065 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016647.1 Neisseria meningitidis strain M22809 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2115380 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 2115446 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 2115512 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 2115578 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 2115644 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 2115710 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 2115776 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 2115842 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 2115908 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 2115974 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 2116040 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 2116106 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 2116172 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 2116238 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 2116304 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 2116370 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 2116436 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 2116502 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 2116568 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 2116634 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 2116700 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 2116766 36 100.0 30 .................................... TGTAAATGAGGTTATTGAAGATGCAAAAAG 2116832 36 100.0 30 .................................... TTTTCCAAAGCGTAAAATCACATTCGGGGC 2116898 36 100.0 30 .................................... AACACTGATAGGGAATGTACCCTCGATAGT 2116964 36 100.0 30 .................................... TATGCGCGATATGCGGGCGCACAATATCGA 2117030 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //