Array 1 2143615-2141857 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRIT010000001.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-057 tig00000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2143614 32 100.0 35 ................................ AGAATAAGGATAATCAGAAAAAGCTGGATGCGTTA 2143547 32 100.0 35 ................................ CTGCTTAAAATGGCTATTATCGATCGCATTTGTGG 2143480 32 100.0 35 ................................ CTTGTTATAAAGTTTTTTATCGTTGACAAACTCAT 2143413 32 100.0 35 ................................ GTCCCTCCTGTTTTATGATGTAAAAAAGCCTTTAT 2143346 32 100.0 36 ................................ CTCTTTTTTGCTTGTAGAAATGCCCCGTCAGCTCCG 2143278 32 100.0 34 ................................ TTGCGTAGAGCAACATGTCCGCAAATTCTGTTAT 2143212 32 100.0 34 ................................ ACGGAAAATACCTAAGATTTCATTCTTTCTTGTC 2143146 32 100.0 33 ................................ TAAAGTTTTCGATCTTAAAAAAATGGAGAACTG 2143081 32 100.0 34 ................................ ATCTAACCACCTCCAGTATATCTACAAAAATGCC 2143015 32 100.0 35 ................................ TCAATAGCTTCTAACATGAGTCTGATGTAAATAAC 2142948 32 100.0 34 ................................ TTTTTTTGTTCACGTTCATGAACTTTATGCTTTT 2142882 32 100.0 33 ................................ AGCAGATGTTGATGAAACAAATCAAGAACTTTC 2142817 32 100.0 33 ................................ TTTTTCATCTAATCACTCCCCGTATAAATCAAC 2142752 32 100.0 34 ................................ ATCAAGACGCAGACAATACCTGACATAATAACTG 2142686 32 100.0 33 ................................ ATCCCATTTCTGTAGGTCGTTTTCCTCGATTAG 2142621 32 100.0 34 ................................ AGCTTCGGGCTGTAAAGAACCCATGCGCAGATAC 2142555 32 100.0 35 ................................ AAGGATGGCTAGTTGTTTAAGTTCGTCAATACTTG 2142488 32 100.0 34 ................................ AGGCTAAACCTATCCTAAAAATAAAAGGTACGGG 2142422 32 100.0 36 ................................ TTGAGATGGTAACACAAGGTTTATCACCAGCAAAAA 2142354 32 100.0 34 ................................ TATTGGAGAAGAAGCTACAGAATTATTAGCCAAA 2142288 32 100.0 34 ................................ ATATCAGCTTTCACAAGATGATATGAAAGTAAAG 2142222 32 100.0 35 ................................ TGTAACGCAAGCTAAAGTCGGAAATTTTAGCTACA 2142155 32 100.0 36 ................................ TAATATCCAAACTCCCCACAACCGAGACAGTTTGTC 2142087 32 87.5 33 ........C..TGC.................. TCAACTACTCTATTGTTATGCTCTTTACCTTTA 2142022 32 87.5 36 ........C..TGC.................. CTAAAAGACTTTCTGATTTTAACCAACCCTGACAAC 2141954 31 87.5 34 ........CA.-.C.................. TGTTTTTAAAGATCGCAAACAAAAAGTAAAAACT T [2141949] 2141888 32 84.4 0 ........CCAT.C.................. | ========== ====== ====== ====== ================================ ==================================== ================== 27 32 98.0 34 GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT # Left flank : TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATATGGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCTTACTTCTGTAAAAGGAGCGAGTGCGAGCCTGGATTACTCATAAAATGCTGGGAGGCTCGCGCTAAAATAAGCTAAAAAATGGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA # Right flank : TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTAGCTCTCTTCTCGGGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAATTGATTTAAGCTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGAGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAATTGTCAACATTTCTGAATCCAAAGGCATTGCGCTTGATGTCCTTGATCAGTTTGTTAGTCGCTTCAAGCTTGGCGTTAGAATAAGGTAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGGGTGATTAAGATTCGGTAGAGCCTCGTTTATTAACCCAAAGAAGAGCTCTATCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGG # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //