Array 1 32232-38303 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHOG010000019.1 Rheinheimera sp. UJ51 51.19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 32232 32 100.0 34 ................................ AACTATGGTTAACACCGCTGGCGCCGAGCAAATA 32298 32 100.0 35 ................................ ATATAGCTTGACTTCATGGACGCACTATCCAGCTT 32365 32 100.0 35 ................................ CCTATAAATAGGATTGAATGTGATGGATGCACGAG 32432 32 100.0 35 ................................ GACATGGATGCCATGGCAGCAGAGTTCGAACGCGA 32499 32 100.0 35 ................................ TACCTATGAATTGAACGTAGGTAAACCAGCATGAA 32566 32 100.0 34 ................................ CGCTATTCCTGATTCGGTATTTGATAAAAGGAAT 32632 32 100.0 34 ................................ GGCAATGAAGTGGATGACTCTGTGCACATCGATG 32698 32 100.0 35 ................................ AAAAGTAAGCTGGGTAAATGACTATAGCGGTTCGC 32765 32 100.0 35 ................................ GGTTTTGCTGCGGCTAAGTTGCGATTGCAGCTTGT 32832 32 100.0 34 ................................ ATCACTGGCGGCGCTGGCGGTTGGGCTGAATAAG 32898 32 100.0 35 ................................ TAACGGTTTTAGTACATCGATAACAAAGGGGGCGG 32965 32 100.0 34 ................................ GTGAACATTTGCGAGCCTTGATAAACACTCTTAA 33031 32 100.0 36 ................................ TGCGCCCTCGTTTGGCTGGCCGTTTAATAGGCCGTG 33099 32 100.0 35 ................................ CACTCGCCAGAGCTACCGGTTAGCATGTTGGTCAT 33166 32 100.0 34 ................................ AGCATGCAAAGAGCTTGGGCTTAATTACAAGTCT 33232 32 100.0 34 ................................ AGTGATGATAAGATTTTACAGCTACTAAAGGCAG 33298 32 100.0 35 ................................ CTTTGCTCATTTATCTGCCTTAATAAACTTATCAC 33365 32 100.0 33 ................................ AGGACAGCAGCAACCGCAGCGTGACCGATATTT 33430 32 100.0 35 ................................ ACCACTATAAACAAAACAACTTATCGACTTGCGTT 33497 32 100.0 35 ................................ AAAACTAAAAAGCAAGCCATTGCTGCATTATGGCA 33564 32 100.0 35 ................................ CACTTAAAAAAGTAGTAGTGAACTTTAGCAGTGTT 33631 32 100.0 34 ................................ CAACTGGAATTTGACGGCGAAATGCTCACGTTAG 33697 32 100.0 33 ................................ TACGTAATCGGCTGGGGCGTTGTGGCCCATAAA 33762 32 100.0 35 ................................ AGCCACAAAGCCACAATAATTCTTTATCTTTTATA 33829 32 100.0 35 ................................ GCGGCTATGTACTGGTTAAAGTGCCTGATCACGTT 33896 32 100.0 35 ................................ TAGCTTTGAATAATGACGGTGATTCAGGACAGAAA 33963 32 100.0 33 ................................ TGCGAAACGGCTTAATCGTTGTCGATGTGTTCA 34028 32 100.0 34 ................................ ACGCCGTTGCCGTCAGGTCAAGCCGTGGTCGTAG 34094 32 100.0 35 ................................ CGGCACTGAGGAACTCACGCAGGTAACTGCCGAGC 34161 32 100.0 34 ................................ CACGATGTCACTGTGGATGCGCTAACAACGGGTA 34227 32 100.0 35 ................................ TGGATGCTCAACAAGTTGTTGACGTCATAACGGGC 34294 32 100.0 33 ................................ TATTGACGGGTGAAATTGAGGGTTATTAAATGG 34359 32 100.0 35 ................................ CTAGAAGAAATGCACATTATGCCTAATGATTGGAC 34426 32 100.0 34 ................................ CCATGTCAATCTAAACAACGCTTCTGCTGTACCG 34492 32 100.0 34 ................................ ACCATTGGCATTCGCTGCCATTCTTGCCTATAAG 34558 32 100.0 35 ................................ GCGTCATTTGACTTACGTTGAGCGGTGCCTAAATT 34625 32 100.0 35 ................................ TCTGACGGCGGTGCCCATCTGTTAATGATGCCGCG 34692 32 100.0 34 ................................ GCGCACGCACTGATGCCTATTTTATGCGTCAATG 34758 32 100.0 35 ................................ CTCGGCATGGCTGGCTTAGCTGATGGCGGCTTGAC 34825 32 100.0 33 ................................ CCGTAACCGCTGATTGGCAAATCTAACTCTGGC 34890 32 100.0 35 ................................ CTCAATCCATAGGTGGGTAATGCCAAAAATCGACT 34957 32 100.0 34 ................................ GTAAGCACGCGCTTTACTGATAACGGGTAATCTG 35023 32 100.0 35 ................................ GCAAGCTCGGAATAACGATTGACCAAGGCGTTGTA 35090 32 100.0 33 ................................ CAGAAAAGAAATGATTATTTGTTTAAAGGGGGC 35155 32 100.0 35 ................................ AAGCCGTTAGGTTTAGACGAGCCAAACTATAGCTG 35222 32 100.0 34 ................................ GGCTGCTCAACAGTTCACGCCAGCCGGTGCAACT 35288 32 100.0 34 ................................ TTTTTATCATCGGTGTACGTTGCGCCGTTGCACC 35354 32 100.0 33 ................................ GGGCCATGCCTGGCGTTGAGGAGGATTTGCAGA 35419 32 100.0 36 ................................ TCATACAACCCCTTTAATGGTTAACTGTATGCTAGT 35487 32 100.0 35 ................................ GGCGTAACGGCTTAATTGTTGTCGATGTGTTTACG 35554 32 100.0 35 ................................ GCACGTCGCGAACAAGAAGCGCAGATTCAATTAAA 35621 32 100.0 34 ................................ TGTTAAGTGGCGTTTGCCTGCTTTGATGTGACTT 35687 32 100.0 35 ................................ TTACAGGGTAAAGAAAATGAAAAGCAGAAGAAGCA 35754 32 100.0 34 ................................ ATGCTGACTAACTGCATAGCTAAAGAAACGGAAG 35820 32 100.0 33 ................................ AAGACGAGACTAATCGCGCTGGGGCTGATGCTG 35885 32 100.0 35 ................................ ATCAGAAAATAACCAAAGCACTGAAAATTTAAGTG 35952 32 100.0 35 ................................ ATCAATGTTAATGATGCTGCGAATGTTGTAATAGT 36019 32 100.0 34 ................................ GTGATGATGTTGAAGCAATAGCCAGAGGGATATT 36085 32 100.0 35 ................................ AAACGTGGTGGCTGCGTTGTACTCGCCGGTATTGC 36152 32 100.0 34 ................................ ATCCTCTGGTTCAGGCTGGCTCGCATAGCCGCTT 36218 32 100.0 35 ................................ AGGTAGTCGATAGACTTTGGCTCTGAGCTATCTGC 36285 32 100.0 33 ................................ AGGCTGTAGGAACGTCGAGCCAATAGCGGCCAT 36350 32 100.0 34 ................................ GCCTAAGAAGCCGGCGAAGTCATAAAGCACTTGT 36416 32 100.0 34 ................................ ACTCTTACCTTGCGGGATGCTAAAGCCGATGCTC 36482 32 100.0 34 ................................ TGAATTACAGCACAGCGAGCAGCACTAACGGTCG 36548 32 100.0 36 ................................ CTTGCGCCATCTTTATATAGGCAGCCACCCGTAAGC 36616 32 100.0 34 ................................ TGGCAGTGATAGGCTTTTAAGTGCCAAACTAATT 36682 32 100.0 34 ................................ TTTCAATATGCGGTAAAGCAGCTTTCTAGCGACA 36748 32 100.0 33 ................................ GATAAACTCTGCTCGCTGCTGCTTAACGATAAA 36813 32 100.0 35 ................................ CTGTCTTTGGTTGCTTTTGCAGCTCTGACTCGTTC 36880 32 100.0 33 ................................ AGTATCTCAACACTGAAGGCGGCGAAGGTATCC 36945 32 100.0 35 ................................ CGCCACTCGCTCATAACTATAAATGCAGCTTATAG 37012 32 100.0 35 ................................ ATAGCCGCTTGATAGCCCAACTATGGTTTTGCCGC 37079 32 100.0 33 ................................ CATTGCCGATGATAGCCTGGCAGCGCCGTCACG 37144 32 100.0 35 ................................ GCGACAACATGCCGAAACCAGACGAAGTTAAGCAG 37211 32 100.0 34 ................................ AGGTAGAGCTGGGGCAAAAGCCCCTAACTCTTCC 37277 32 100.0 34 ................................ TTTCTTTTCTGACGAGGTGGCGCTAAAAGTGGCG 37343 32 100.0 35 ................................ AAGTGATCGCAGTGTGACCGATATTTTTACCGAAA 37410 32 100.0 33 ................................ GTGTCAGTGTATGGAACACCCACAGCGGCAACA 37475 32 100.0 34 ................................ AGGCGTACAAGCCAATCAAAGTTATATTGTGTTG 37541 32 100.0 33 ................................ CAGCCGGCTATGCGAGAGCGCAAACCATGATGC 37606 32 100.0 34 ................................ TAGATCTCGTGCTACTGCATACTTGCTTGTTATA 37672 32 100.0 35 ................................ TCGCTGAACTGTGATTTTTGTTGCTGCTTTATATT 37739 32 100.0 34 ................................ GACTAGCGCGTTAAATTTATTAAAAGCTGCCATC 37805 32 100.0 35 ................................ GGCTTAGGCTTGAAGGGTTACACTTGGGATGAAGC 37872 32 100.0 35 ................................ TTCACGTATCACGCCATGCGTTTTACAGTGATCTA 37939 32 100.0 35 ................................ GCTCTATTGCTTCCCTGCGTGCCGCATAGAAGCCG 38006 32 100.0 35 ................................ GGTAATGTTATCACCGCGCCAAGCGTAGAACTCAA 38073 32 100.0 34 ................................ GGTAAAACCGCCAAGCTCATCGGCGGTCAGCGTC 38139 32 100.0 34 ................................ CTTAACTGTAATAGCTGGCAACAATAACGGATTC 38205 32 100.0 35 ................................ GCTTTGTGCGTCGCGCTAGATTGCGCTTTTAACGG 38272 32 93.8 0 .G...................A.......... | ========== ====== ====== ====== ================================ ==================================== ================== 92 32 99.9 34 GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Left flank : CCTTTTTTAGTAAGTAGCAGGTAGCTCTTTTATGATGGTACTAATTACCTACGACGTATCCTTTAGTTCAGAAGATGGCAAAGCCCGGTTAAGACGTATTGCCAAAATTTGTCAGGACTACGGCACCCGTGTGCAGTACTCGGTGTTTGAGTGTGATATCGACCCGGCGCAATGGGTCAGATTGAAGGCTGAGCTATTAGCAACTTACGATGAAGAAGTCGACAGCTTGCGTTTTTATATACTGGGTAAAAGTTGGCGCAGCAAAGTAGAACATCATGGCGCAAAAGCCTCGTTGGATTTATTTGCCGATACGCTGATTATCTAATCGCTAACCTGTAGTGCTCTTTAAAAAGCCGGATCCTTAGCGGCGGGCTTACTAACTGAATTTAAAAGTTAAATGTAAGCCCGTAGTATTTTTACGTTCGTTATTTGAATAATCTCTGTGGGTTAGCGCTAAATACATTTTAGCGTTAGACTACCCCCGCCTTTGCAAAAAGGCA # Right flank : CTGATTATGCTAGTTTAGATATATTTTATGTCGCGCCTTTTTGTGCTCACTTGACCCATGACTGCCGAACCGACTGCTGAATGATATCTATTAACTCTGGAACTTCCGGTTAGATGGATGTAAATGACATCAAAATGGCGTATCAAAATTATTTATCCTTCTGATATCTCTAAAAATTCACCAACATCACATTCTAAGTATTTGCACAGTATTTCCAACGTATCGTAGTCAATGCGCGTAGTGGTCTCGTGATACAGTCGCGTTAAGGTGCTTCTGTTGATCCCTGTATCCCGCATCACATCGGTAATCTTCAATTTTTTTGCGCCCATCAAAGTGGACAGGTTACATTTTATCACCCCAAAGCACCTAAATGTTTCTCTAAAGATACAAAATGTGCTTGACAGGTATCTTTTGAGTATATTATTGTATCTCTAGAGAAGCATAATGGCTTCTTGTAGAGGAGACTTATAGTATGGCACAAACTTATCTGACAACGGAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 56118-55831 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHOG010000017.1 Rheinheimera sp. UJ51 51.17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================ ================== 56117 23 100.0 42 ....................... CGATGTGCTCGTGAGCAAAGGGGTTAAGTAGCATGATGCAAA 56052 23 100.0 42 ....................... TGAAGTGCGCGTGAGCAAAGGGTTTTAGTGACGTGATGCAAT 55987 23 95.7 44 ..T.................... CTAGGTGCCCATGAATAAAGGTGTTTGTAGTGATGGAATGATAT T [55976] 55919 23 100.0 43 ....................... CGAGCTGCCAGTGTGTGAAGGCGGTTAGTAATACTGCTGCAAA 55853 23 69.6 0 .....AA.T...GC.......AG | ========== ====== ====== ====== ======================= ============================================ ================== 5 23 93.1 43 ATCCACGGCGATTTTTTACCTCT # Left flank : GCCGCTGAGATCTGTTCGTCAGTTAAAGACTGTTCGATATGCTTCACCATCCTCATTTCTGAACGAGTTTTATTCATCTCACAAACTAAAATATCTCCTACAGCAAAACCTAGCTCAGAACATAGCTCATCAGGTCAGGTAGAGGGAGAAGGTTATTCTGTTTTATCTCAACAGTGTAGCCCATCTTAAGCTCAGTTTTTGTTATGGGTAAATGCTCTTATGAGCCTAGTACAAATTGAACAATGTGTCACCAATCAATGTCTTTAACCTGACAAGATTACCCATCTAATATAAGGGTTCATTATCAGCAAGGAGGGCTTGAACAATACTGTTCTGTGCCAGCTAAAGTGGTCGCTTCTTTCTGACGTTTTTTTTCAAATTGTGATGATAAAAGGTTTGGCACTAGCAGTGCCAGTAATGGCGTTGTGAATTAACAATTAGTGGTAAAAAACGTTTTCAAATGAGTGGTCCTGTAAGTGCAATTAACCAACTGGATTCTT # Right flank : TCAAGTCTGGGGTGCCCATTTTAAGTGGCGTAATACTGATCAATGTTTATTACGAAAAATACAACCGATACTAGTGTGTATTCATTAAAAATGAGAATAGGTCTGTAAAATACCAAGTGCCTTGTTTTTACCGTTGAACAATCTAGTTTTATATTTTGTTTTGTAATTAACCGTTGCGAGGATACGAATTGACGCCGTTCAAGATAGGTTCTGCACCGGAGCAGGGTATTGAGCAACCAAAGGCGTGGCAGAGGCGTTTTTCCTCAATAAACCATCTTGCTGACTTTGTTGATCTTTCTCCTCTGTATCTTAAAAGGTCAGTGCACGTTAAGCAATCAAAAGTGCAAACGAGGTTAATCGAGATCCATGCACTATTACGTCGGGTGCGGCCCTGGTTTAATTCGGATCAGGCTGCATGGGCATGGTATATCGGTGAGCCTATTGTCGCTTTTGAACAATTAACGCCATCAGAAATTATTAAAAAATTTCATGGCTCAGGT # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCACGGCGATTTTTTACCTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //