Array 1 18865-18621 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026683.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM10, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 18864 31 100.0 40 ............................... ATTAGTTAATTTAATTTGGGTTTTTGTAACCTGGGTTTCA 18793 31 96.8 39 ................A.............. TAAAGCTGTATACAAGTTTAGTCAATACCTGTAGTTTCA 18723 31 100.0 41 ............................... CTATCACAAGCAGCAGCACCCTGGTTAAATGCTGAGTTTCA 18651 31 96.8 0 .........C..................... | ========== ====== ====== ====== =============================== ========================================= ================== 4 31 98.4 40 ATCCCTAATAGGGATTTAGGTTAATTGCAAT # Left flank : TGAATGCTGTACCCTGCTGACTCAAGATATTTACACGCCCAAGGGTAACGTTAGACCCAGGCTGATTATCAGAAAATCAAACACCAAGGGGAAACTAGCTACTAGGTCAATTCCAGTGATTGAAGACTTACGGCGGTTATTGGTTGAATACTACCCACTGGCAGGAGATGATTATCTGTTTCCCGGTCGCAGTGATGGACACATCAGCGAAGACTCAGCCGCTAGGATTTTGAGAGAAGCTTGTCAGCAAGTAGATATTTTTGGAGTGAGTAGCCATAGCTTCAGGCGTACAGCTTTAACTCAGATGAGTAACGCTGGTATACCACTGAGAGTTATTCAGGAAATCTCAGGGCATCGGAATTTAGAACAGTTACAGAGATATTTAGAAGTGAGCGACGAGCAGGTGTTAGGGGCGGCTGCAAGCTTGGCTATGCTGTCGCCTGTGGGTAGAAGTGGTTTAGAGCTAGACACAAATAAAAAACTTGAAATTGACGCACATT # Right flank : ATGTAAGTCCCATTGGGCGAAAAGTATTCTGTCAAAATTGTTGAATCAAGTCCCATGTTGTATAGGTATATAACCTGTTGACATTATTTTCAAGGAGGTTATTTGCTGAAAAATCAAAAAACTAAAACACCGACTATGTTCCGGTTAAATAGCGTCATGACACATTAAAGCTAGTCTGGCGGACACCAAACTAGCACCAAACAATAAACTTAATGGAGTTACTTCAATGGTTAATAAAAACAACCCCATACAGTCCAATAATACTCTCGTTGGCTCAGTGATGAATGTTGCCCTTTCACTAGGGGTTATGCTTGGTTCAGGTCTAGCGTATGGTTTTGTTCAAACTGCTTTTAATTCTCAGCAGCATGAACAATCTGCCCAAACTGAACTCGGTCGCTTCGGTCGTGCAGAGTACGAACAGTTAAAAACAGGGATGTCCTTAACAGAGGTGCGGTCAATCTTATACCGAGGTATTGAGGTTAGCCGCTCTGTAACAACAG # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCCTAATAGGGATTTAGGTTAATTGCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 161114-160716 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026682.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 161113 36 100.0 34 .................................... TGCTAGGCATTGGCATTGTGCTAGAAGAGTCAGC 161043 36 100.0 38 .................................... AATTTTACCTACGCTCTCCCGAACTCCCTAAAAATAAA 160969 36 100.0 37 .................................... CCCTCATCCGTCAACGCATCCGCTTTTTTCTGATTAT 160896 36 100.0 36 .................................... ATTTGTCAGCTGTGGCAGTTTTTCTATTTAAAAAAG 160824 36 100.0 37 .................................... CTTGGTGGAAAAGCCATTATTATCTCCTTGTAATGAT 160751 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 100.0 37 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : GCTGATTTTACTGGCATGACTGCCCAAGGTAGTGTAGGAGTGGTACTTGCTTCGTTGTCTGTACAAAGTCCCTTACAATATACCCCAGCAGAATCTTTTGATGGACAACCTAGTGGTTATTCTCTCAATCCCATTGAAATTACTCTCAAGCAGCAGTTTCGCAGAGGAACAAACTAAGTAATTTTTTCTCCAAGTCTATATTTATACTTGCTATTTAAGTTTACAGATAATGCGATCGGTGAATATTTTACTCAATTTCAGCAAAAGTATTGTTATATCTAGGTTTGAGGCAATTTGTATGAGTTTTGTATCAGCTTCATCGACACCACTCCCCGAATCGCTGAAAGCCTATCTTTTTCGTTGAGTGGTGTCGATTGCTCACAGGGAGAGGGTTTGAGATATGTGTTTGGCTCAATTTCGAGGGACGTGTATAATGATTTTTAGACTGGTGTCGATTTGGCGGCTGAAACCCTTACTGGGTAAAGGCTCCTAGACGAACT # Right flank : AATTAAAACCTCCTGTATCCGTAACTTGGAGCAGGAGGTTATTTTTAATGAGAACAAATATTTAACAAAATGATGATTGTTAATTTTTTCCTGATTTAAGGATTTTTATTAACTTCTTCCTCTTTACCATAGCGATATAGGATTAATTTCCCTTGAGAAGAACGACAGCTAACCCGCACTCCTTGAGTCACGCGAAAGTGGTCAATATTTCCCATGTTAGTATACTTGTCATACTGCAATCCCCCATGCTTTTTGAGAATAGCAGTATCACCATCAGAATCTTCTAAGAGATAGGAAATTTTAGCTAAAGTCTCTTGTAACTTTACCCTTGGTTGCTTCTCCTTTACCTTTTTGTAGTCAGCTTCAAATGAATCTTGATATTCTAAATTGAAGAAAGAAAGTAAATCTTCTGAAAGCAGATCATCTTTACACTGATTCCAAATTAACTGTCCCCAAGTCGAAAGTGTCATTTTCTCATCAATTTCTGCAAGCATAGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 171418-169359 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026682.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 171417 36 100.0 36 .................................... ACCTAAAGACTGACCATCGCTACCCACCAGCCCCTA 171345 36 100.0 33 .................................... CATACATGAGAATTACAAAACTATTAATCCTAA 171276 36 100.0 43 .................................... AAGCTTACTTCAGATGCCGAAACCTCCACAAATCTATGATTAA 171197 36 100.0 36 .................................... TTGGGATGGAGGCATATTACCTCCGTCCATTGGGAG 171125 36 100.0 33 .................................... TTCAAGTCTGTGAATATATTGACTCTAATTCTG 171056 36 100.0 39 .................................... AATAAACTCCATTGTGAATTTGACACAACTCAGATGATT 170981 36 100.0 38 .................................... TATTAATGTAGGCTTGGTGACTTTCCTGTTCAAGAATA 170907 36 100.0 32 .................................... TAAAAGATACGGACTGTTTAATTAAAAACTGG 170839 36 100.0 37 .................................... CAAACTCATTGGTACTCGAGGTCTCTGTTGAGATTGT 170766 36 100.0 34 .................................... GTCAAAGTCTCAGCGTTTTCAAAATATGATAAAA 170696 36 100.0 36 .................................... AATATTATCTCCAGATGGAATTACACAAAAATAGGT 170624 36 100.0 35 .................................... TTTGCTATCCTCAATAGTTTTGGATATTAGTTTTT 170553 36 100.0 36 .................................... AAAATTTCTTTTCTCGCTCGCTGGCGAGAAAACCTA 170481 36 100.0 37 .................................... ACTAAGCAGCAACTAACTGAGTCTGGCGTATCTCCAA 170408 36 100.0 36 .................................... TTTATAGTTTTCCATTGGATGCAATGCGCACAAGAA 170336 36 100.0 35 .................................... TTAAAGTTGATAGTTGGATTGCACTTCACCGTTTG 170265 36 100.0 37 .................................... CAAGAATCTATTAAAAAACTCTAACGGAAACGATTAA 170192 36 100.0 37 .................................... TTTTGAAGCAGAAGTAACACCGACTGTAAATTTAGGA 170119 36 100.0 32 .................................... CTTTCTTGCGAATATTCTGGAAGGCGTTGCGT 170051 36 100.0 39 .................................... AATTAATCAGTGATTGCATTAATCAAAACATCCACCAGA 169976 36 100.0 35 .................................... GTTAAACTGTGAAAAGTTTGTCACACCCGCAGTAA 169905 36 100.0 36 .................................... ACTTCAACAACTTGGACTTGAGCAACAGGAGCTGTT 169833 36 100.0 33 .................................... GTAGGTCTTGGCAGTAGCACTATCGACATTTGA 169764 36 100.0 38 .................................... CTCCAGTTTCTATGCCTTCGAGTAGCTCTAATTTCAAT 169690 36 100.0 40 .................................... CTGCATTACCTGGCATTGTTACAGTCGAATTGACAGTTGA 169614 36 100.0 40 .................................... TCTAAACTTTTACCTCAAAGAAAAATCTTTGACTTCCTAA 169538 36 100.0 34 .................................... AAATTGTTCCGAAAATTGTCAAAAGGGCTAGAGA 169468 36 100.0 38 .................................... TTTCTAAGCGTAATCAGTATACTTGCTGACGCTATTTC 169394 36 91.7 0 .................................GTT | ========== ====== ====== ====== ==================================== =========================================== ================== 29 36 99.7 36 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : TGCTTAAATGTTAGTAGTTGTTGTGTATGATATTCCTGACGACAAAAGACGTTCAAAACTATCCAATTTTTTGGAAGGCTATGGGCAAAGAATCCAGCTTTCGGTTTTTGAATGTTTTTTGGATTTGTCAGAAATGCAGCAACTTTACGATGATGTCAAAAAGCGGGTTAAGGCATCTGAAGATAATGTGCGGTTCTACTGGATTTCTCAGGAGGCTGTTAATAGAGTGTTAACGATTGGTGGTGAATCTCCCCAACCACCGCCAAAGTATTATGTAATCTAGGTTTGGGGAATTTTAAGGTAATTTTTCAGAGGTTCATCGACACCACTCCCCGAATCGCTGAAAGCCTATCTTTTTCGTTGAGTGGTGTCGATTGCTCACAGGGAGAGGGTTTGAGATATGTGTTTGGCTCAATTTCGAGGGACGTGTATAATGATTTTTAGACTGGTGTCGATTTGGCGGCTGAAACCCTTACTGGGTAGAGGCTCCTAGACGAACT # Right flank : AAAACCCAAAAAAAAGCCCTCTAAATGGAGGGCTTTTATCTGCTTAATAACATCGCCACAGCTTATCTAAGCTGCATCAAATTTTCTATACTTAGCGAGTTTGTATTGAATATCATCCAAATAAATAACTTCATCAGCTACTTGAGAAAGTTGCTCACTCAACATACTCTTTTTGGCAACAACAGTAACCTTTACACCGCGACGCTGCACTTCTTCAACAACTGGAATAAAATCTCCATCTCCACTGACAAGAATCACATCATCTCCTTTTTTAACTTCGCCAATAATATCAACAGCGATTTTCACATCGTCACCGACAGTTTTAAAACTTTTGCTATCAGGTCGCGCTAAGATAGGAAGCCCGATAACTTCATAACGCTGATATTTTAAATAATCAATAAACCGCCTTTGTCCATCATTCATAGGTGAATGAATACCAGTATAATATTTAAAATTAGTCCGGCTAGCATTTTGAGAAAGTTCTATCCGTAAAGCATCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 101565-102198 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 101565 35 100.0 44 ................................... TTAGTTGGAGTACGTGCATACTTGATTTCTATCGGCTATTGGAG 101644 35 100.0 36 ................................... TAATGACAACATTCGGCCTTATACAGGTGCTATTAA 101715 35 100.0 40 ................................... AGAACTGCCAGCCAGTTGACGGATTGTGCAAAACACCAGA 101790 35 100.0 44 ................................... CAATATTCCTTGTAGCTTCTACATGTTATATGATAGGCCACGCA 101869 35 100.0 36 ................................... CAAAAGCTTCCAGTTTATTGGAAAATGGTGACTATC 101940 35 100.0 41 ................................... GTCTATGCTTTAGATAATCTGTCAGGGACTGTAAACATTAA 102016 35 100.0 39 ................................... CTGTTCCATCGCTAAAAGCTTTCCTTCAAACCTACGGCA 102090 35 100.0 39 ................................... TTTCAAATGGAAAAAAGCTAGAGATAATTTTAACATGTA 102164 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================ ================== 9 35 100.0 40 GTTTCCATCCCCGTGAGGGGTAATGATTTGAAAAC # Left flank : AAGGTAACTTACGTGATGTTTGGTTAATTAGCAGTAAAAGTTACGATTTGGTTAAAGGCTCTGAGATTACTGCCAAAATTTTGTCACAGTATTTAACTTTTGAATATGGGCAACGTCTAGAAGTCCACACTCAAGGTTATTGTGTGGAGGATTGGAATTATAAAAGGCTTTGGGAGATAGGAGATCAAATTTTCCGCGAATCAGATTACAAAGACGAGGCTTTAGTTGCTGACATTACTGGTGGAACCAAGATGATGACTATGGCGCTAGCGATGTCTTGTGTCTCACCAAAGCGACGGATGCAATATATGGATGCACAACGTGACTGGCAAGGAAATCCTTTGCCGATTGGTGAAATCAAACCTGTGGGTATTGATGTTGCTCCAATTATCCACGGTAACGGTAATTAGATACAGCAGTTTATTAGCAGAATTATGTAGCGCAGTCCTTGAATATAGCAGGGCTGCGTTTTTTTGTTCAAATTTATCGCTTGGGGAATC # Right flank : CCCTACCCTTCTAGAACACTTGCTACGACTGGGTTTGAAAGTGCCATTTTCGCGGGGGGTCTGATTTTACTGTCAATAAGCATACTTTAATGACACTAGCCCACCACTATAGGCATCTCAAAGTCTTACTCAGTAAGCGATTCGCGGGGGTCAACGAAATCATAAGGGTTTCAAGCATTGGCATACCCCCGCGAAAAATTTGCGTGTGTAGGGTAAAAACCAACACTTTAACTTTCACCAAGAAACGCAATATTAATTTTTCAAGGTTCCGTTTGATTAAACAAGAGTATACCAAACTACTCCTCACTCTTCAAAGCGCGTCGTGCCAACTTGACATAAGTCTTCACTGTTTCATAAGGCATCTCTAAATCTTCTGCCACCACATGCAATGACTCGCCCATTTCCCGCCGTGCTAAGATTGTCGCCCATTTTGAGGCTATTTCATCTGCGCGATCGCCACCCGTCCGCTTGCGTCGTGCTTTAAAAATCTGTGTTAAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTGAGGGGTAATGATTTGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 108496-106920 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 108495 35 100.0 37 ................................... TATCAGGAGAGCATTGTGACATTACGAGGATATAAAA 108423 35 100.0 36 ................................... TATACCTTCCATCGATCTCCGAAACTTTGTGAAATA 108352 35 100.0 40 ................................... AGTAAAGATGAAACGCCTATGATATTATCAATTCCCATCA 108277 35 100.0 35 ................................... CAGGTGCTCTTTAGAGTTTCTACATCTCCAATAAA 108207 35 100.0 39 ................................... AAAACCGAACTACTATTATTTAGTAGTAGGAGTTGTACC 108133 35 100.0 40 ................................... AGTTGCTTTTTGGCATCTTCAGCATGGGTCATGCCGAACT 108058 35 100.0 35 ................................... AATGAAAAAGTCACTAATCCAAAAAGAGATTTCCA 107988 35 100.0 36 ................................... AATTGAGCCAATCCTTGCAAGGTTGCCTATGATTGG 107917 35 100.0 37 ................................... TTTTCCTGTAAAAACTCCCTTGCCCGTGTAATTATGG 107845 35 100.0 39 ................................... TACTTTGGTCAATCCTAGCAGAAGCTGGATGCTTGATTG 107771 35 100.0 37 ................................... CTTTACCATTTATTAGAATGGCGGAAGGAAGCTTTGC 107699 35 100.0 40 ................................... TATGCAAACTCGATACTTTTCCAAAATTGATGTTGTATTT 107624 35 100.0 42 ................................... ACAGATTTGCCTATAACCACCATAGCTATTATGACTATGGCT 107547 35 100.0 37 ................................... AAGTTTCAGGATTGATTCCTGTCGCTTCAAAAACTCG 107475 35 100.0 42 ................................... ACTCGTATTGGTACTGAAACTGCTAGAACTCGAAGGTATTGC 107398 35 100.0 44 ................................... AATTAAGCGTTATATTGCTACTCAAGCTTTATAACAAAAACCGT 107319 35 100.0 37 ................................... GCTGCAACCTTTTTCTTGGCGGTAGGTTTAATAACTG 107247 35 100.0 38 ................................... TTCATCAAGGGAAGAAGCAGCAGCACAATAAATTTGCG 107174 35 100.0 42 ................................... GGTATATTAGAATCGAGTTTAGCATGAATAAAAGTAGAATTT 107097 35 100.0 36 ................................... ATATTTCACCTTTCGATGATGCTATAATACATTCGC 107026 35 100.0 37 ................................... TGCTACTAATTTATAATGATAATCTTTCTCTCCCTTT 106954 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== ============================================ ================== 22 35 99.9 38 GTTTTAAATCTCTTACCCCTCACGGGGATGGAAAC # Left flank : TTGAAAAAGTTTCTTAAGCACTGGGAAGAAAAGCTGCAATCTGAGTTAACACACCCAAATACTGGATATAAAGTTAGCTTTCGTAGGTGCTTAGAGTTACAAGTGCGGGAGTATGTAGCTTGTCTCATGGGAGAGGTTAAGATTTATCGACCAATGATTTGGAAACCTTAATAGAGAGATTGCATTTAGTCGGTCGCTATGGTATTGTTTATACCAACACATGCACCTTGAAAATTTAATAAGTACATATTTTTTACGTATAACTTAATGGTTAGTTTCCTGAAGCCATTTTGTTAAGAAATGTAAACTGAGGGGGTCGAACAAAGTCTCAAAGCCTGATTGTTTCGTAGACCCCCTCAGATGACTTACTGTATAAGGGTTTCAGTTACCTGGAGACTGTAGTTATTCTCAATAACTATGCTCTGTTGACAGGTAAAATAGACCCCCCTCAGTTTTGCAGTTCTGTAAGCCTTATTTGGTAAGCTTTCTGTAACAGTAGG # Right flank : GTTGAAAGGACGTTGCGATCGCATTAGTGATTTGTCATGCTGCAATGACTGAAGAAAAAGTGCGATCGCATTAATATATGTAAGGTGCGTTATGCCGAAGGCTAACGCACCGCAATAGATCATAAAAACGGTGCGTTAACCTTCGGCATAACACACCCTACCACTAAGTCGGGGATAGTACCTCCGACTTTTTTTATGCCTTTTTAGTAACTCATATAACCCATATACGAAGTCATATAAAAATAGCATTTACGCAAATACGAACTCATATATCAACCTGAGAAAATTGAAATATAGGTAAGGAAAGAAAACTTTCTTACCTACAACTCAACCTAGTTGGCTTCAATTTATGTCTACGATTTACATCACCGAACAGGACGTAACATTCCAAATTCAACACCATTATTTAAAGGTGTTTCATCAACAAAATCAACGTATCTGCATTCCAATTCGTAATCTCAGTCAATTCATAATCTTTGGTAATATCACTTTACCAAAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAATCTCTTACCCCTCACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 112963-112637 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 112962 35 100.0 36 ................................... TGCGGTAGACCAAACTGGAGCCCAAGCTCCAACCAC 112891 35 100.0 37 ................................... AAAATGAAAACTTTTACGTAACGACTTTTGTAAAGAC 112819 35 100.0 38 ................................... GGAGAGCCTATAGAGTTTCAATGTAAATTCTCTGAAAT 112746 35 100.0 40 ................................... CGTACATCAAAGACTGCTTTACAAATTTCCGTTATTCTTG 112671 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 5 35 100.0 38 GTTTCCATCCCCGTGAGGGGTAAAGGAATTAAAAC # Left flank : GAAAATGTTCTGCTCCAAAAATCCTTTTCCAAAGCTCTAAGGATTCTAAAAAATATTTTTCGGCTTGTGAGTAATTCCCTTGTGAATGGTATAGTGCTGCCAGATTATTTAAAGATTGTGCAACATCAGGATGTTCTGAACCTAAGAGACTTTTTCTAATAGTTAACGCTTGTAAATACAAGGGATTGGCTTCTAAATAACATCCTTGTATTCGATATAATTCTGCTAAGTTATTCAAGCTATCACAATATTCTGAATGCTCAGTTAGCTTCTGGCTTGACCCTAAGTTGACAGCTTGTTGGGCAATAATTATTGCTTGCTTTAAGTTTCCTTGTCCAGCAAGTTGCACAACCTGTAAGTTAAGTTGATTTAATTTTTTTATCAGTTTTTTCATCTGCTGGTTCCAGACGCTTGTATATCTTTTAGTTTTGACTTTTCAATCAATCAATCAATCAATCAATCAATCAATTACTTATTTTACCTAAAATTGTTCATCATCA # Right flank : CCTACCTTTTTAGAAGCCTTATCCAGAGAGGGTTACAGATACCCATTTTCGCGGGGGGTCTAATTTACCTGTCAATAAGTATAGTCTATTGACAATTAGGTACAGGTTTAGGGATCTCAAACTCATACCCAGCAAGCTTTTCGCGGGGGGCAACGAAAGAATAAGGGTTACAGGGATTGGCTTACCCCCGCGAAAAACTTACGTATGCAAAGTAATACTAAGCACTTTGACTTCCATTTTGAAACCTGATATTAAGTTTTCAAGGTTCTGTGGCTATGAGCAGTAGTATAACAAACTACTTCAAGTTTTGAAAGCCTGAAGTATTAACTTTTCTATTGTGCAGTAACCATGTAATCTGTATACCAAAGTTGATAGTCTCCGCGTTCAGTCACGTATTTTAGTAACTCTATAAGATGACTTGCTTCTAGTGACAAAACCTCATCATTCTCTTGCCGTAACCAGTCTAATGCAGGTACTTCCTTGGTAACGACTGCGATAAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTGAGGGGTAAAGGAATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 4 445292-443372 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 445291 37 100.0 35 ..................................... GAGAATTTTAGAAGTCAACGATTTAGGATACTCCG 445219 37 100.0 34 ..................................... AGTTGCCAAGTCGCCAACGTTATCAGTTCTAATG 445148 37 100.0 35 ..................................... AAATGATGCTAAGGCTTACTTCGATATCATTTCAA 445076 37 100.0 31 ..................................... AGATAAACCACAAGCAAAAGTATTCCGTAAA 445008 37 100.0 34 ..................................... GGGCAGGATTATTATCATTTCGCTCAATAATTTT 444937 37 100.0 34 ..................................... CTCTACTTCTATATCACCTGCATTACCCCAATAG 444866 37 100.0 37 ..................................... ACTTTAAATGACACTTTAAGTGACAGTTTTCCAGAAG 444792 37 100.0 33 ..................................... GTCATGGTAACAGGTAACGATAGCCACTGATTA 444722 37 100.0 33 ..................................... CAATGAGCCATTCCCTGTCGACCTTGATGTTGC 444652 37 100.0 39 ..................................... TCAAAAGCAACCTTCTACCGAGCGATCGCAAAACTACAA 444576 37 100.0 35 ..................................... CGCAGCTTCTCGACTGGTATCGACAAGTGCATTGC 444504 37 100.0 36 ..................................... TAAATCAACACTCAACACGCTTTCTACAATTTTTGG 444431 37 100.0 34 ..................................... TCACTTTATACATCAACTACCTAAGTAGAACTGC 444360 37 100.0 34 ..................................... AAGCAACACAAACAACCGAGTGATAAAGGTTTGA 444289 37 100.0 36 ..................................... TTAGCGATGTCTGTTCTACCTTGGGTAGAAGTAGAG 444216 37 100.0 35 ..................................... ACGAAAAAATGATTGCAACTTTCAGATAGGTGATT 444144 37 100.0 36 ..................................... TCTTCGTAGGACATTGTTAACGATGTAAAAGTACCA 444071 37 100.0 36 ..................................... TTTCTGGCTATTAGATTTTAAGCTACCGATATCATA 443998 37 100.0 37 ..................................... AAACTTGCTGTAGGTACTACACTAAGGCGACATTCAG 443924 37 100.0 33 ..................................... AGCGAGTTACTTGATAGAAGATTTTAATCTGCA 443854 37 100.0 46 ..................................... TTTTTCTTAGTACTAATTCTTGGATATTCTCGTATTTGTGAGCATA 443771 37 100.0 36 ..................................... TTTTTCTTAGACAAAAATACGCGATCGCATAGCTTA 443698 37 100.0 37 ..................................... TGCCTCCTTGAGTTGCGCTTTTAATTCTTTCCATTGA 443624 37 100.0 35 ..................................... TCATGACTCCCCGCAAACTGCCAATTTTCGGGATA 443552 37 100.0 35 ..................................... CAATTTCTTGGGCAAACATCTGACGATTAACTGGA 443480 37 100.0 35 ..................................... TGGAACCACGCCCAGCCTGGTTTAAATTTGTACAA 443408 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 27 37 100.0 35 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : TGTTCTCTCTGTTATTCATAGAATTAACAGACCTGATACGCAATTCTTCGCTGGAAAGGGGAACGAAAGAGGTTTTGATTAAAACAGCTTTTAGAGAGTTTGCTTGTGCAATAACAGACTTTGAAGACGTTGCCAAATAAAGTTGATCGTGGGGGTGCTGGTATTGGGTAGGCGTAGCCCAACCCAGGCATCGCCCTAGAGTCAGCTAAACTAATCGAGTAGGATATTTATATGAGTAATCAGCTTTTCAATGAGATTAGTTTTTTCGCTAAATGCGCGGCTGGGTAGGTGTTGGAAAAAGGGTAACTAGAAAAATGGCTGAATTGCCCTATATGCAACAACTTCAGAGCGATCGCATTTATAAACTATCCGCGCACCTTATGGGGACTAGCTTTCAGCCATTTGCCTCTAGCCAAATTCCGACTCCTCGTGTTATGATTTCTCTATTCGCGCAACCGAACCTTGAAAACCAAATAAGACAAGGCTTTCAGAAGCCAGCG # Right flank : CAGTCGATTTTAATTGACTAAAACCTGTGTAATATATACTTTCCGTTGTCTTCACCGACTGAGAATCAGTGATGTCTACGATGGGCTACGCCTACGCACACTCGATTTAGCTTATAACCTGAGTTCAAGCCAGATTCAGTTCTCTTTAGATTTATATTTACGAATTAGCTTTTAAGTCGTCAATTGTATTGCGGGCGAATGCTTGACAATATTAGCTAACTCTTGCAATTGTTTTACTGCTTCAGCACCCTCCAACTTCATTAATTCGCGATCGTCCCACAATTCCATCCAAGTAATCCCGTAATCAGACACTACAAAACGAATCAGATGCTTTTCTCGCAGGCTAACCATGAATGAAGCACTCTTCATTTGGTCGCCGCACGTATAACACGAGGCAGAATATCCATGCTGCTCAAGTACAATTGTCAAGGCTTGCAGGTTCATTACCAAGTCTTGAACGAATTCTTGATGTTGTCGCGCTAATCTTAGAAACACTAGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 5 4391416-4390319 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 4391415 37 100.0 36 ..................................... TTTGTTTAAATGCTTTAAACGCTTCTCCAACTGTTA 4391342 37 100.0 34 ..................................... TTAGCAGCGCTGTGATGACAATTATGGACTAAAA 4391271 37 100.0 35 ..................................... AAAAGAAAAGTTATTCATTATAAAATGTCTGACAT 4391199 37 100.0 34 ..................................... AGCAAAAGGAGACAGAATACCCGATATCGTTGTG 4391128 37 100.0 36 ..................................... TCTCCCCTCGCCATCTCCGGCACTTGCAAGCCCAAT 4391055 37 100.0 30 ..................................... AGATGCCAGCATCAGATAAGTTGCTCACGG 4390988 37 100.0 32 ..................................... CTTTAGCAGCGATCGCTCGCGCTTGCTGTCCA 4390919 37 100.0 35 ..................................... TAATTCTGGCTAACTCTTCTAACTCAATAGCACTT 4390847 37 100.0 34 ..................................... TTTAGATGAGGGGTATATGCAAGGAGAGGATTTC 4390776 37 100.0 32 ..................................... TACAAAATATCTCGTGCAAGTGGTTTTCATGC 4390707 37 100.0 34 ..................................... TGAGGGTTGCTCATGTCCACCAGGTGGACATGAG 4390636 37 100.0 32 ..................................... ATTACACGGGACGGTTATGGTTCGACGTTTGG 4390567 37 100.0 33 ..................................... GTACCCACTCACTTGCTACTGAATACATGACAA 4390497 37 100.0 34 ..................................... AAAACCCACAACTTATTGCCGGAAGATATCATCG 4390426 37 97.3 34 .............................G....... CAGGATTATCCACAGGATGATACCTGAACATCTC 4390355 37 97.3 0 .............................G....... | ========== ====== ====== ====== ===================================== ==================================== ================== 16 37 99.7 34 GTTGCAATGACCCTTCCCGTGTTGAGCGGATTGAAAG # Left flank : CGAGATTTAGCGATCGCTGCTTACCATTTTCGTCAAAATAAATCTTAATCTTCAGATTGAGCAAATATACTGAACCTTGACAATAAAATAAGTAATAGCGCCGCAGTTCATGTTCTTTGTAACCGCTGAACTGTGAAAAATATGGGGTAGTTTGACTATTGGAAGATAGTCTTGCTTTCTGACCCTAGTAGCTGCTCACCCTGATGCTGCTGTCTCCGGACAGGAATAAGGTGCGCTCCCAGCAATAAGGGCGCGGATATACTGCTGTAGTGGCTACTAAATCACCTCCGACCAAGGGGGAACCCATACCAATCCTTGTTTTCAGGCATTAGAAGAGATTAAAAATTTTCAGTCGATTCGCGCTTGCTTGCGGTGAAAGGGTTTTAGCGTTTAATGGCACACAAATTGCCCATTCAAACGGTAGTTGAAGAAGCATGGAATATACATCCGCGCTATCAACTCTGGAATCCTTCACAAAACAAGGATTCTATAGAGGAAGG # Right flank : ACCAGAGATTCTAAAGGTTACAATTACTATTCCTGCAAAAATGGATTAAAATTTAATACTTAATCATGAGCAAGAAAGGAAAAGTTATGTAAATTCTTCCAGTACAAGGCTAGTGAAAATATAAAGATTAGGAAATATTGGGTATGGGTTGAAAGGGTTCAACTCCGTCCTGCTTAACTATAAAGAACAAAATTTCTCTGTTTAAGCAAGGTAGAGTAAAAGTTTTTAGAGCTTGAGTTAAACTTAAGCTTATGGTTTTCTATTAGGGATGTCTGATGTTGACCAGTCACTGTACACGCTCGATAAATATCTAAGTATTACGACATTAGTTTGTGAACGGTTTTCTCCAATGAGCTACGACACCAATTAGTGAAAGAGCGACATTAATGTGTGAAAAACGACATTAATTTGTGAACGGCGACATCTAATTTGTGAATGTACAGGTGTACCGCCTACTTATACGATCGTTATTCTTCTTAAAGTGGCTCAGGTCGGAGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATGACCCTTCCCGTGTTGAGCGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : NA // Array 6 4634403-4632487 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 4634402 37 100.0 34 ..................................... CAGCATTGACACTGCTGAATACGGGGAAATTTTA 4634331 37 100.0 35 ..................................... AACTACATAGACATTAAAGATGATGATGTTTTTGA 4634259 37 100.0 34 ..................................... GTGAAAGTTGCTAATGTTCCAAGGCTGACAATAA 4634188 37 100.0 33 ..................................... ATAGATTGGCACAACATCGAGATTATTACAAAC 4634118 37 100.0 35 ..................................... TCCTAACATATTAATCCCAAATTTCATATCTATGC 4634046 37 100.0 35 ..................................... AGCATAGTATGAGTAGTAAGCTTGAATTATATCGA 4633974 37 100.0 37 ..................................... GTTTGTGACTGTGACGGAACCCGTTTAGATTGCAGTA 4633900 37 100.0 35 ..................................... AAACCGATTATTGGCATAATGACTCCACCTTTTTA 4633828 37 100.0 38 ..................................... ATCTCACGCCTCCTTTGCATTTTGGAAACGCAATGCAA 4633753 37 100.0 40 ..................................... GAGCGATTGCAGGATATTAGTGAAGAGGACGCGATCGCTG 4633676 37 100.0 33 ..................................... GAATGATCGGCTCTTCTACCTCAATCGGTTCTG 4633606 37 100.0 33 ..................................... GGCAAAACTTGGCTTAATTGTTGATGTCTTCAG 4633536 37 100.0 39 ..................................... CAATTACCCGAATTTCTCGCAATCGAGCTTGCGGCGAGG 4633460 37 100.0 36 ..................................... TCATCCGGTACCGGGATTTCCCGTTTCTCGACCCAA 4633387 37 100.0 35 ..................................... AACAGCGATACCACTCGTGCGACTCGACCGGAAAA 4633315 37 100.0 32 ..................................... GACCCGGCAACACGACCAAATAATGTAACGAC 4633246 37 100.0 34 ..................................... TGGGCGCTGGCAATGCGCTCGTTACTGAGTCCGA 4633175 37 100.0 36 ..................................... TGAAAGGGCGATCGCAATTACTCCCAGACAAAGATA 4633102 37 100.0 38 ..................................... TTCTCCCGGCTTGAGATCGAGTTTGGGCATTTGGTTAA 4633027 37 100.0 35 ..................................... TTTTCACTACCATTCTGAGCAGTAAAAATATCATA 4632955 37 100.0 34 ..................................... ATCTAAATTGGAGGAATTTAAAAAGGGATGGAGG 4632884 37 100.0 35 ..................................... GAGGCTAGTTCTGGGCTTACTTCGATTGATTGCTT 4632812 37 100.0 35 ..................................... TGATGAATTCCCGCTAAAAAGCCCTCTCTGTGTCT 4632740 37 100.0 35 ..................................... TAAGCAATCGTTGCGGAGATTTTCTTTCTTCTAAA 4632668 37 100.0 35 ..................................... GGTAGAACCGATTCTTTCCAAAAGTCGGAATCTGA 4632596 37 100.0 36 ..................................... AAATCCAAAGTGGCGATATCTTGGCATCTAAACTCC 4632523 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 27 37 100.0 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCCATTCTCAAGTCTTACGGACAATGGATGCAACTGAGTGTGTTTGAGTGCGATATCACTCTCACTCAGTATGCTAAACTGCGATCGCGTTTGGCCAAATTGATTAAACCCGACACCGATAGCGTGCGCTTTTATTTTCTCTGTGGCTGCTGTCAGGGAAAAATCGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCTCTTTCTAGCTAGGTTCTTGCATCTCAAATGCGCGGAGGGGTAGGTGTACAAATTTCACAGCCCCAAAAAAGTGCTTCTATCCCAAGTACAGCAAGGCTTTCAACCCATTATTTGCCTAATCCTCATCCGCGCAATCTCTGAAATGCTTATCAAAAAACGATTTCAGCCTTTAAATTTTCCTGACGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCCCTTGAACCGCGAAACTGCACCTTGAAAACTAAATACAGCTTGGGTTTCAGCCTCCTGCC # Right flank : AATAATTGGGAAAAGGGTGGGCTTAGTGCCCACCCTAGACCATTATTTAATTGATACTATACAGGTGCTTCAGTAGCAGTCTTACCAATCAGCATTGCAGCATTTTCCTCGCTTTCGAGGATACCGAATTCAATCAACAAATCTTCTAACTCTTCCATCTCAATAGGTGTGGGGACAGTCAGATTCTTGTTGTTGATGATCTTTGTACCTAATGTCCGATATTCATTAGCTTGGTTACTGTCAGGCGCATACTCGTTAACAGTCATGCGACGCAATTCTGCGTGTTGCACAATATTGTCACGAGGTACGTAGTGAATCATTTGGGTGTTCAAGCGTTTTGCCAGGGTTTCGATAAGATCGATTTCCCGGTCAACGTTACGGCTGTTACAAATCAAACCACCCAAGCGCACACCGCCAGTGTGAGCATATTTGAGAACACCACGAGCAATGTTGTTAGCAGCATACATCGCCATCATTTCACCAGAGGTAACGATGTAGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 7 5862554-5863535 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 5862554 36 100.0 37 .................................... TTTGAGTTGTCCACCTAACAACGTGCTTACTATTTTG 5862627 36 100.0 39 .................................... AGACATCATGTACCCTTTGTACATTTCAAGTTTACTATT 5862702 36 100.0 38 .................................... TTTACCTGATATAGATTTAAATAAGTTAGATGAATACG 5862776 36 100.0 35 .................................... GACTCAACCACGGGGTTGAAAACCTTACCAGTTAA 5862847 36 100.0 37 .................................... ACATTTGGTATTCATGGTAAATCACGGCAAGATGCAT 5862920 36 100.0 36 .................................... AAAGTGTGAACCTCACCACTAATTAAATATTTTTTA 5862992 36 100.0 42 .................................... TTGACATTTTTGATTACCTTGAAACTTTACGAAACATCTAAA 5863070 36 100.0 43 .................................... ATCAACTGGTGAAATCAACCGTGTTGACCCTCGTACTGGCTTA 5863149 36 100.0 41 .................................... TCTAAGTCTTTGCAATCGTATACTGGCTCATTACTTGAAGA 5863226 36 100.0 37 .................................... AAAATGCTTCTTGCAGAAGCGTCATCTTGTGATGGCA 5863299 36 100.0 39 .................................... GCAGAAGCTATTTTTACTGTAGACAATAGGACTGATGTT 5863374 36 100.0 37 .................................... GGAATAGCTAAACTCAACTCAGCTTTGACTAAGCCAG 5863447 36 100.0 17 .................................... CGATCGAGCTACCTAAT Deletion [5863500] 5863500 36 86.1 0 .....T........A.....T..GG........... | ========== ====== ====== ====== ==================================== =========================================== ================== 14 36 99.0 37 ATTCCCACTCGCTGGGGATACTAATTGAATGGAAAC # Left flank : TCAGCCTTATCGTATTGATTGAGGCTGAATTATGTTTTTATATGTGATTGCTTATGACATTCCTTGTGATAAACGACGTAAAAAAGTAGCTGATTTACTTGAAGGCTATGGACAACGGGTTCAATATTCTGTCTTTGAGTGTCAGTTGACTACCGATAAATATCAAGATTTACGTCGTCGGTTAAGAAAAAAGTTGAAGTTAACTGAAGATAGTCTACGATTTTACCCTTTGTCACGACATACCCTTTCTCAAGTAGAATCTTGGGGTGTGGGGCCATCTGTGATTGAACCGCCTAGTTCGATAATCATTTAACTGATCTTGCCGAAGTTCAGGTAAAATGGCTGAAGTACTTGTTTGAGCGTTGTGAGCTTCGGTTGCTTACAGGGTAAGGGTTTAGGGAATGTTGGTGATTGGTGGAATGGCAGTTTGGCGATTAATTTTTGTGACCTTCGGAAACTGCTTCTGGATTCCTTACTGGGTAAGGGTCTAAAATTGAGGG # Right flank : CTGCACAACTAATACAATTTGTCAAAAAATAAAAAATATTTAGCTAAAATCCAACCAATTAGCTCAAAGCCTTGCCATGAAGGGATTTAAGAGATTGAGCAATCTTAAAAATGAATATTGACTATTATTGGACATTCCCAATATAAATTTATACAATCAAACCGGACACCATAGAAAGGGATTCACCCATGTCAGAAGCATACTGGCAAGCAAAAATATGGGGATTACTCCATGAACCGGTGCTAAAAGCGTTACACAATAACACTGGGCACGGTGACAATAACTTTTGGCAACAATTAGAAGTAATGCAACCTTGGGTGCAGAACAATTATAATCCTAATCCTGAAGAGTCCGAGCATGAAATCTTAAAACACATACATTTGGCTGTTGACATTGCCTTGGCGAGTGATAAAGCTGGTATTAGCAGCGTTGCCCAAAGCATAAATTATGCATCTGGAGAGGATTCTCCTCAAAAAGGCTTAGAAATTTTTCATTTGCTG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCCACTCGCTGGGGATACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 8 6010033-6007943 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================================ ================== 6010032 37 100.0 36 ..................................... TAGATAAATACATTATATTCCTACCTCAATTACTTC 6009959 37 100.0 37 ..................................... TACTTTTCCTTTTGATGTATTCTTTTTATTAGTGCGG 6009885 37 100.0 33 ..................................... ACTAGCATCAAAAGCGAATACTTTAGTGTTATC 6009815 37 100.0 32 ..................................... GGATGACGATAGTGATTCTATGCGTAAAATGA 6009746 37 100.0 34 ..................................... GCTAGCAGTGAAGGGGAGGGGTGATTGTCATCGA 6009675 37 100.0 34 ..................................... CGGCTACATTGCTTGTGGCATCCTGCCCGGTATG 6009604 37 100.0 42 ..................................... TTCTTCATTTACTTGTTCCCAAGATTCATCCGAGGGTGTATA 6009525 37 100.0 32 ..................................... CAGACCTTTGGGTAGTATCAACCCTAAAACTG 6009456 37 100.0 35 ..................................... AATGCGATAAGTATCGAGTTTACTTACCATGCCAA 6009384 37 100.0 34 ..................................... AAGCACTCTATTAAATGTAGTGAGATACTTGCTG 6009313 37 100.0 32 ..................................... GAGTCGCACAACAATTTCGCGCGTTTCATTGA 6009244 37 100.0 37 ..................................... TTTCCCAAACATCGGCTAAACACAGTACTCTTGAGCC 6009170 37 78.4 34 GCCA.G.AAA........................... TTTCCCAAACCCATTTTACCGAAAATCAGAGATG G [6009165] 6009098 37 100.0 35 ..................................... GATATCCACAGTACTTTAGACTTTGGTACTGTTAA 6009026 37 100.0 37 ..................................... AAGCAACCAAAGCTAATTTGAGTTTTAGAGTGATTAA 6008952 37 100.0 34 ..................................... TGATTAACGTAAGACAACCTATCTTATCACCCAT 6008881 37 100.0 36 ..................................... TGAGAAGCTGTGGCAGGGTGGGAGGCAAGCAGAGGA 6008808 37 100.0 34 ..................................... GAGTGATTTCAGATACTAAGTTCATAATGATCCT 6008737 37 100.0 34 ..................................... TTATACTCTCTACCCATACCATTACCCACATATA 6008666 37 100.0 35 ..................................... TGGATACCAACATCACTTAGTGAAAGCGTTTTGGA 6008594 37 100.0 36 ..................................... GCGTTTGAGTTTGCGATCGCTGCATTTCTCACATCG 6008521 37 100.0 37 ..................................... TGACGGTGGGTATATTATCGATTTCATTTATAACGAA 6008447 37 100.0 33 ..................................... ACCAAGATTTGCTGACTGTAGATTGGTTGCCGA 6008377 37 100.0 39 ..................................... AAAGCTGCTACTGCTACAAGAGACGCGCTTGATGCTCAG 6008301 37 100.0 34 ..................................... CACAGCGCGAAGCGGAGAAACTTCGGCTCTAGTA 6008230 37 100.0 37 ..................................... AAATCCACCTCAACAAGCTCACCCTGTTCTTTCTCAA 6008156 37 100.0 140 ..................................... ATTTCTTATGCATATATCCCCTTATAGCGTTTCTCGTTCACGTGAGGTACACCCGTAGGGGCACGGCACTGCCGTGCCCTTACACTTCGCGATTTAATCTTGTACCGCATGTGAATGGGAACCGCTATAAAGCCTTTTAT 6007979 37 91.9 0 .........T.........................TA | ========== ====== ====== ====== ===================================== ============================================================================================================================================ ================== 28 37 98.9 39 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CGTCGCCAAGGTGGTTGTTGCGATAAATTTGCGGCGTGTTATTTCTTTCATCATCTCTACCTTAAATTGGCAAAAACTTTATTGTTAATTAGTCAGTACAGTAGTACGACAACTAGATATTACAATTTATGAACCAGTGTACCGTAATATTAGCTTCGTTTGCTGTCCAAGCTTTCTTTGCTCTGTGACTGTTGTCAGGCGAAAGCCGATGTATTGGAAAATATAGTTAGGTTTCTATCCGAATCAAATGCGCGAAAGGGTAGGTGTACAAATTTCACAGCCCCAAAAAAGTGCTTCTATCCCAATTACAGTAGGGCTTTCAACCCACTTGTCGCTTAATCCTCATCCGCGCAATCTCTGAAATGCTTATCAAAACACGATTTCAGCTTTTAAATTTTCCTGGCACTCTTTCCAAACGAATTCTCTAATGCTATGATTACTCAAGAATCGCGCAACTGCACCTTGAAAACTAAATACAGCCGGAGTTTCAGGCTCTTGCT # Right flank : TAACAATTACCCATCATTAGATTGATATAGGAATCATATTTGATTTTTGAACAAAATTAGGTATTGTAGGGTGTGTTAGAACGCAGTTCGTAACGCACCATTATCGAGGGTTTGGTGCGTTATGCTGTCGCTAACACAACGCCAGTGACGCTACGCACAGTCGCTAACGCCCAAGTCGGTAAACCCACCCACACGACAGGCTCCCCTACATAATCTTTTCTCCAAATCAAACCGGATTCCTAGCAGATTAAGATACCTACTATTATTTAGGCGTTATGCTTGACTTCTTCGCCTGTATCACTTGCAAACTGCCGCCAGAATATAAAATTGGCTCACTCTCATCAAATCCAACCTCAGTTAATAATCTAGCCAAATCAGTTTTCAACAATTGCCAAGCTGTTTCCGTCTCAAACAACAACAAAAACAGTGATATCCCAGGCCAAAATATCGGATTTGTAGGAGCGTGAAAATCTATCAGCGTAAATACCCCTCCTGGCTTC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.34, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 9 6065562-6064649 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 6065561 36 100.0 36 .................................... ATTATTATCAACCGCTGTTCTCTCAAGAAATGTTTT 6065489 36 100.0 40 .................................... TTTGAATCTTCAAACACATCATAGACAGTATGCCCATATA 6065413 36 100.0 35 .................................... ACTAAATTTCACTTTTTCAGACAGCAGTCTTTAAG 6065342 36 100.0 41 .................................... GCAAAAGCTAAAGATGATAGTCTCATGTTTTTTACCTGAAA 6065265 36 100.0 34 .................................... GACTTCCTTTTGTGCTTTGTCGCTTGCAATTTCG 6065195 36 100.0 38 .................................... ACTGGATCAGGTGTAACTGGTGGGGTCACAACAGAACC 6065121 36 100.0 37 .................................... TTTAATATCACCTCTTGGTGAATTGGTGAATACTCCT 6065048 36 100.0 32 .................................... CTTTTGTCTTTGCTCTGCACTTAATGGCAGAG 6064980 36 100.0 42 .................................... CTAATTTAGCTTCTGCTTGAAAATCTTCAGATTGAACTTCAA 6064902 36 100.0 40 .................................... TGTAACAGCACAACTTGCATCTACAGTGTATAAACTATTA 6064826 36 97.2 34 ...........A........................ ACACAACCTCCCCAGCCAATTGCTTTTAAAAAAA 6064756 36 100.0 36 .................................... ACAGTATTGAGCTAGTTTTGGCTGCGCGTTCTGAAA 6064684 36 86.1 0 ...........T..................ATC.T. | ========== ====== ====== ====== ==================================== ========================================== ================== 13 36 98.7 37 CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Left flank : AAGTGATTATCAAAGTGCGCGAAATTGATAACAAAGGTCGGATTAATCTCACCCGCTTGGGTATCCACCCAGATCAAGCAGCAGCAGCACGAGAAGCGGCGGCGGTGAATCGGTAACTCGATTTGGGATTTTAGATTTGATCTAAAATCCGCGATGCCTACTGTGAAGGCATCGCTGTTTGCTTCTCTAATTAGCTTCCAAACTGTTATAGATAAATTTACCCCGCTCACAATTGTTAATTTATTTATTAAATACTTGACAGGTTTAAGGTAATATATTTTACTGTTTATTCAGTGTGTTGAAGTTCATCGACACCACTCCTCAGAACCTTGAAAACCGCATAACTTCGTTGACTGGTGTCGATTACTTGTACAGTAAGGGTTTCCGGCTAAAAAATCCATCTCTTATTGACAATTTTATCGTATTTATTGACATTATTAAAAGTGGTGTCGAATAGGGGGTCTGAAACCCTATCCTAGTAAGGCTTCCAGAAGTGAACT # Right flank : TGAAACTCAGTGAAGACAACCAATTCAACGCTAATTAATTATTGATATTATTCTGGCAACCCGTAGTTGAAGTATTTAAAAATACATTCTTTGTCTATTTACAAATTGAGCAAATTACCCGATCGCAGCGACACAAAAAAAATGTGATTAAAAACACTTTTTCTTGTAATCAGTCATAATTTATGTAATTTGTGCAATTAATCTCCCGTCAAAAATATCATGGCTTTAGTTTCAACGATAAACAAACTGACATCAACACAAGTCCCCACACTCAATGATTGCAGTTCACAAAGCCTGCTCAACTACTTCCACAATTCTTGGGAACTTGAAGAAACACTCATGAAAAGTTTGATTGGGGAAGAAACTTTTTATCTGAACCCCGATCCTTTAAGAAACCCTCTAATCTTTTATCTTGGTCACTCAGCCGTTTTTTTCATCAACAAGTTAATTGGCGTTGGTTTAATCAAAGCTGGAATTAATTCCCAATACGAAACCCTATT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 10 6578349-6578526 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================= ================== 6578349 33 100.0 38 ................................. ACATGAGCAACATAGGACACATCCGCTACTACTTACAG 6578420 33 100.0 41 ................................. ACACGTGGCTAGCACACAACGCTGGTAGTGAGAAGCATCCT 6578494 33 97.0 0 ..........................G...... | ========== ====== ====== ====== ================================= ========================================= ================== 3 33 99.0 40 TTTCCATCCCCGTGAGGGGTAAGTGATTGAAAA # Left flank : GAAATATCTGGCTCAAACTGATAAATAGCAGCAAAAATTTGACCTCGTTGTGCTGGCATTTCCACAGCAATAGTTTTTGGATTTTGATTTTTGCCTGCTTCTGACCAAGCTACCGCAGCCAAAGTTGAAATTGCAAATACAGGAATATCTAACTGTTGCCCTAAAGTCCGAGCAGTGACAACACCAATTCGAGTTCCGGTAAAACCACCGGGGCCTTTTGCAACTGCGATAAATGACAAATCTGCCCAAGTTTGCGGTTTGATAAATTCAATTAAATATTGATGTACTAAGCTAGATAAATCACGCCCCAAATTCCAAATTTGAGAGCGAGTATCGCCAGCAAAATTACTAATTGCTAGTCCTAATTCAGGTGTGGTGGTGTGCAGTGCTAACGCGTATTTTTTGGTGGTGAGGTGTTTGAGTTCTGTGGTCAAAGTTAATTAAAATATTGATTTTTTAGAGTTGACTTGATTTATCTATTCAACCACATCATAGTCAGG # Right flank : AACCCTACCCTTGTACAACCCTTACTGTAACTGGTTTTGAAGGCTCATTTTCGAGGGGGTCTAATTTTTTTTCAATCAGCCAAAATTATTGACAAAAATCCAACAGTACATCTCCTCAAACGCTTACACAGCAGCTTGTCGAGGGGGTCAACGAAAGAATAAGGGTTTGAGCGATCGCCATACCCCCTCGCAAAACTTACCTGTGCAAAATCAAAATAAATACTTTTGCTTTGACTAAGAAACTTAGGATTGAATTGTCAAGGTTCTGTTATTAATGGGTGCAAACATAACATATTACTGTTTAATTGTCAAGTCGGCACTAACTCACCAGGACGCAATTTCGACCACTTACCCGTTTCCCGTTTAAAACTGAGACAACCAACAACATCCCATTCCATCTCAATCACATCATCTGTAGTCCTAATGTTGACATTGATAGAAGGTTCATTCGGGTCAAAGTTTGGTGTTTCAGTCAAGTGAGGCTGTTGGTGCTGCCCTTC # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCCATCCCCGTGAGGGGTAAGTGATTGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 11 6690622-6691479 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 6690622 37 97.3 40 T.................................... TAAATACTTTAAGTTCTGAAAAACTTTGGGTGTGGTCTTG 6690699 37 100.0 36 ..................................... AGCAGTTACAGAGTTATCAATGTATAATATCTTTTG 6690772 37 100.0 36 ..................................... CATTGTAAGTAACTAATTTCTCCCATTATTGAGTAA 6690845 37 100.0 37 ..................................... CATAAGAACTGGCACTGGTACCATAACTATTTGAAAA 6690919 37 100.0 34 ..................................... TCTCCAGTGACTTGATCTTGCAAGGCAAAGTCTG 6690990 37 97.3 37 C.................................... TTTGATCGCTGACGGTGGTGAAGTTCCTGGTATGACG 6691064 37 100.0 35 ..................................... ACTACACCATTTGGCGTAGACCCTTTCCAGAGGAA 6691136 37 100.0 42 ..................................... AGAATAGATCATATCCTGATCTTTATATCGAAGAACCGTGAA 6691215 37 100.0 35 ..................................... TTTCCAAATCACCAGATGGGTTTTTTTGGTCAAGA 6691287 37 100.0 42 ..................................... ACTTGAAAGATGCCGTCTATTTTAACAGATGCAGCATTGCTG 6691366 37 97.3 40 G.................................... CCAATCTCGTGTAGAATTCTCCACCATTTTTGATAACGAG 6691443 37 89.2 0 G......G......................T.....T | ========== ====== ====== ====== ===================================== ========================================== ================== 12 37 98.4 38 ACTTTACATAACCACTTCCCCTAACGGGGACGGAAAC # Left flank : GGTAAAAGCTGCTGTGAACAAACAAAAGAATCTAATTCCTACCCCAGTACCAACCAAACAGGCGATGTCCAATGACAAGTCGCTACCTGTCTACACAGTTAATCCTTCACCTGCTAATTTTGAAAGTGCTGAAATCACCCTTGAACCAACCCCCAGTCCGTCTATCCCTAACTCATCTCAAGAAGTTCTGTTGAAACAGCTGCGGGAGTATGGTAAGCAACGGGAGCAACTAGAGACAGGAAAATAAGCAATACAGCTTGACAATTTTAAGTAACATATTTTACTGTTTATACAGTGTGTTGCAACTCATCGACACCACTCATCAGAACCTTGAAAACTGCATAATTCCGTTGACTGGTGTCGATTGTTTGCACAGTAAGGGTTTCAGGCTGTAAAATTAGTCGCTTATTGATAATTAATTAATAGTTATTGAGAATTCAAAAAGTGGTGTCGATTTGGGGGTCTCAAACCCTTGCTCTGTAAGGTTTCCAAAAGGTAAC # Right flank : TATTTTCGAGACCTTTCTTGTCTTTGCTTCATTTAGGCGCATCTTCTGATTGGTATTGAGTACTCAAAACTGCTGAACCACTACAAGACCAGCAAGTACCAAGCGCCATACTTGGGCAAAGTCCCTATCGATATCTGGATCGCTCCATTCGGATGCGTGGGCTGGATGGTGAAAGCGAACTGTCGCTTGAAGGACTGCTTTAGCTGCTACTTGCGGATCGGTTACTCTAAACTCGTTAGTGGAAATACCGCTCTCTATGATTTGAGCAATCTGCCTAAGCAGTTCAGTAACGTGAGCTTCAACTACCCCTCGCGCCTCTTGGGTAATCGCTGAATAGGTTGCAAATAACTCTGGCTCTTTTAAGACTTTTTGACGTTTCAGAGTCATGAGTTGTTCAAACCATCGGTGCAACCGTTCTCTGGCGGAACCTGGCTCTTGGGCGATCGCTGCTAGCGGTGTGGAAACCCGATGCAGCCACCGTTCTGCCACTGCATCTCGCA # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTACATAACCACTTCCCCTAACGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 12 6864168-6865504 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 6864168 37 100.0 35 ..................................... TAATTATGTTTTTCAACCTGATGCAAATCTAGAAT 6864240 37 100.0 32 ..................................... TTAATACACCAGGAGCATTAACAGGTATTGAA 6864309 37 100.0 36 ..................................... TAGAAAGACTGTGCCATCTTTAGGAGAGGCGACATA 6864382 37 100.0 36 ..................................... TGTGATGGAATCTTCACGACTACGACGACGAAGAAT 6864455 37 100.0 33 ..................................... GCAAAAATTATCAATGGATCTGGAGATCCGGCG 6864525 37 97.3 35 G.................................... CTAACTCTTTAGAAGACAGAAACGACAAGAATCCT 6864597 37 100.0 39 ..................................... GAATCAGTCCAGCCGCAATCCACAACACAAGCGCTGCAA 6864673 37 100.0 35 ..................................... CAAGGCCCCTTTGCACGAGGTAGAAGCGATCGCTA 6864745 37 100.0 37 ..................................... GGAAAGACTCAAGTAGGGTTTGATACTTTAGCTCCCG 6864819 37 100.0 33 ..................................... TTCTACAACCGTGCCAACTGTAAGTGAGTTGGC 6864889 37 100.0 33 ..................................... ATCCACATCAAAACTTTGTGGTTCTGGTTTAGG 6864959 37 100.0 35 ..................................... GGAAAATCCCCGATCGCCACCAGCTGAATAATTAC 6865031 37 100.0 38 ..................................... AGCCATTTTTTAAAGCGCTTTGCCTGTTCTTTGCGAGA 6865106 37 100.0 33 ..................................... AGATTCAGACGCCGGAACTTTGATTGATGAATC 6865176 37 100.0 36 ..................................... ACCGCATACAAAGGATTTATTCACTTCAAAATAAAT 6865249 37 100.0 32 ..................................... TTTGAAGTAATAGAATTCGCGGCCGCTCTAAC 6865318 37 100.0 41 ..................................... CCATGACTCTATTTGCAGATCAGATGCGTTGGCGATCGCGT 6865396 37 100.0 33 ..................................... CCATTTTTGAACTTTAGTACTATCATCCGCCTA 6865466 37 89.2 0 ..........................C.A...T...T | A,C [6865491,6865498] ========== ====== ====== ====== ===================================== ========================================= ================== 19 37 99.3 35 ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : GAAGTTTGAGAGGTAGCAATTGTTTTCGCTAGAAATAAAAGAAAGTCTCTAGTGGGAGCATCCCAAATATGCAGGGTTAATTTACATACGGAATTTTGACTTACCTCGGAGGATAAAAAACTAACCGCAAAGGACGCAAAGGACACAAAGGGAAGAGGATTTAAAAGGGTTTTTGCGTCAGTTCCGTATATTTTTGCCAAATTGGGATGCTCCCGTCTGTAGTAAGCTCATAGATCGTAAACTGCTTTGCAATCAGACCAGTTTTTTTGCCAAGTGCGCGAATGGGTAGGTGTTGGTGAAGAGGTTACTATAAAAATGGCTGAATTGCCGTGTATGTAAGAACTTGACGGCTGTAGAATCTTAAAGCCATCCGCGCACTTTATCTGGACTGGCTTTCAGCTATTTTCGGCTGGCACAATTGCCACTCCTCATGTTATGATTTTCCTATTCGCGCTATTGAACCTTGAAAACCAAATAACAAAAGGCTTTCAGATGCCAGC # Right flank : TGCTAACTTTATGGCGATTTGGTTAAAGAATAAAATCTGTCAGAACGCATCTGAGTGCCATTTCGCCAAACTTCTACTTTTTCAGGGCTGACTAGATAATAGAAACTACCATTATCTGCTCGATATTTGCCTTGACCAATATTTAAAGCTGCAATTTTTATCGGCTTGCTTGGGTCTTGCTTCGACTGTCCAATATAAAATAACTGACCATTTTCTTCACAGACTTTTACACGAATATTTGCAGTCTCACCCTCAATGATGATAACTCCATTACACTGAATATTATTAATAGGTGCAAAAGCTATTGGAATTAGCTGTGAAGGTGAAGCTTGCTTTGCTATTGGGGGTGTCGAGACTGGGTGGTTAGGGTTATCAACTTGTTGAACTTTAGAAGCAGGAGAAACACTTGCAGTTAAGGATGTCAACAGACGAAGGGGATCAACTGCTATTTGACCATTTGGATGAACTTCAAAGTGGAGATGAGGGGCTGTACTATTGCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 13 7182541-7184501 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 7182541 37 100.0 34 ..................................... TTGGCTGCTTGCCTTATACCAATTCAATAAACCA 7182612 37 100.0 37 ..................................... CTTCTGCTGGTATTCATTGGAGTTGGGACAAATATTA 7182686 37 100.0 35 ..................................... GATACTCGAATCACCAGGATATATCAATCTCACAA 7182758 37 100.0 39 ..................................... AAAAAAGTTCAAGACATTCAAGGACACCCATTTAATGAT 7182834 37 100.0 39 ..................................... CTTGAAATCGCCACCTATTCAGGTGATAATTTGGCTGCG 7182910 37 100.0 45 ..................................... AGATCGGCTCCTAACAGGGCGATGTCCGCGTTGAGCGCGAGTAAA 7182992 37 100.0 40 ..................................... AGATCGGCTCTAACAATTGGCGCAGCGCCAAGAGAAGCGA 7183069 37 100.0 33 ..................................... AACGGTGATGTTGTGCAGCGCTGGTTTTGCCAA 7183139 37 100.0 35 ..................................... GAGAGTGTTGGGCAGACTCCAAACAGCCTTCTAAC 7183211 37 100.0 35 ..................................... CTATGACATTGTTAGCCCATCGCTGACTAAAAAAT 7183283 37 100.0 38 ..................................... AAGTGGACAGAAATGATGGGACGCGAACCAAGCAGCAA 7183358 37 100.0 37 ..................................... TTGCTGGCTGGTGGCTCTATTTGAGCTTCTTGAAAGG 7183432 37 100.0 38 ..................................... CAATCCCAAATTCTTAAATGGAGATGTCAAACTCCAAA 7183507 37 100.0 37 ..................................... ATAGACGATGACTCGACCACCGATTTTGGAAGATAGA 7183581 37 100.0 36 ..................................... CTCCCAATCTTCCCTTTTCAAAAGAAAAATTTATTC 7183654 37 100.0 36 ..................................... GAACTCTAACGCTTCTTCTGCAAGTTCAAGTTTAGA 7183727 37 100.0 35 ..................................... GCTAGACGACGCGACACGAGCGAGGGGCTGGATGG 7183799 37 100.0 38 ..................................... TCAGCAGTAGTTGCACTAATAGAAACAGCAGTTGTAAA 7183874 37 100.0 40 ..................................... CTGAACTCCAAGGCAAGGCTTTTAGACTAACGCTGCTGGA 7183951 37 100.0 35 ..................................... CAAAGCCTGAATGCCCAGTCAGGAAACAATAACGA 7184023 37 100.0 37 ..................................... AGCGCCAGAGGTGGTTCCAATTCCACCACCGCCACCG 7184097 37 100.0 33 ..................................... GTAGCCGTTTGAGTTGAGCTACAAAATGAGTAT 7184167 37 100.0 37 ..................................... AGACTCGCATATCAGATGACGACTGATAACTGGATTC 7184241 37 100.0 42 ..................................... TGAACTGAAACTTTCTCCTGGGTTTCTTTCCTAGTACCGTTT 7184320 37 100.0 34 ..................................... TTAATTCCAGCATAGACAGCTTCGGTACTAACTT 7184391 37 100.0 37 ..................................... TGCACGGCGCTGGTTTTTTGAATGCCGGGAATTAGAG 7184465 37 91.9 0 ...................T............A...G | ========== ====== ====== ====== ===================================== ============================================= ================== 27 37 99.7 37 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CTTTCATTCCCCTTCTTTTTCGATCCCAATTTCGATGTAGAAGTGAAGCCGATTCAATTAGATAATATAGTGGCGAATAATGGCGATCGCTGGGATAAAGCTAACATTCATGATTTTCGCGGAACTTATGGCGATTATGTGTTGAATAAGGTGTCTAAGGTTTTTCCAGAATTGCGGCGAACAGTATTATAGAGTTTGAAGCCATTTTTTTTGCTGAGTCCCCTTTTGGTTAGGTTCCTGTATTTCCAATGCGCGGAAGGGTAGGTGTACAAATTTCACAAGCCCAAAAAAGTGCTTCTATCTCAACACCAGCAAGCATTTCACCCAATCATCGCCCAATTATCATCCGCGCAATCTCTGAAATGCTTACAAAAAGTGGGTTTCAGCCTTTAAACTTTCCTGGCACTCTTTCCAAACGAATTCTCTAATGCTATGATTGCTCAAGAATCGCGCAACTGCACCTTGAAAACTAAATACAGCCTGGCTTTGCGGCTTCCGCT # Right flank : GCCTTTACAGTCTATTGAACCTCTAGATGAAGTATCGGTAGAGTGAAGCGATCTAAAATTTAACCAGTGACCTATAAAAGGCAAATCCCTCTCTACAGGAGTGTAGAAAGGGATTTATGGGGTATTAATACCCTTTTTTTTTGACTCCTAGTTTAAATTATTTGCTTTATCAACTGCTTGCTTTAATTCTTCAAAAGTAATACTACCGTCTTTGTCTGAATCATAATTTACTAGTAATTCCTGGGGACTAGTGGTATTTGTTTCTGATGAGATGATTGCACTTAAGCCAGGACTTAAAAAAAGATCGTTAATGGAGACTTTGCCATCTCGATCGCTATCTAAGATATTAAAAAGAGATTGAAGCTCTTGCTCGGTTGTCATAAGTTTCTATCTGAATTACTTTTTCAATTTAAATTTAATATCTCAAAATCTTGACAAAGATGCAAGGATAGTGAAGACAGTCAAGTGTGCAAATGTAGTAAATTTAACGCTACCTAGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 14 7500067-7502419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026681.1 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 7500067 37 100.0 35 ..................................... TGTGCATATTCCAGGGTGGTGATAAATTTTAAAAT 7500139 37 100.0 35 ..................................... AACAAATCTATAACATTAGAAAAATTCTAGACTTT 7500211 37 100.0 33 ..................................... TTAAATTTTGATTGATAACAACGTCAATAGACT 7500281 37 100.0 36 ..................................... AGATATGCAAATACATAGCAATGAGTTAGCTTACAA 7500354 37 100.0 36 ..................................... ATATTCATTGTTTGAAGCACCGCATAAGCGCAATTA 7500427 37 100.0 39 ..................................... TAGGGGGGCATCTGCACCGGGGGGATACTGCGATCGCTC 7500503 37 100.0 34 ..................................... GTTGACAAAGACCGTCAAGCACCCATGCACATTA 7500574 37 100.0 35 ..................................... CAGCATCACCGCCACTTAAAGTAGAGCCAAAACAG 7500646 37 100.0 35 ..................................... ATCGTTACTTGCCTGATTGTCAAATACCTCAAAGA 7500718 37 100.0 32 ..................................... CATCCGGGAATTCCAGATGCGATCGCAGATTT 7500787 37 100.0 33 ..................................... CTAACGTCTGTAGGGATTATAATTCCCGATTGC 7500857 37 100.0 42 ..................................... TTGTCGTATACTGCTGCTATTTCTTCTGTACCTCTTATCCAG 7500936 37 100.0 34 ..................................... AACTATGCGCTCATCTGGATTAGCACCAATAGCA 7501007 37 100.0 34 ..................................... AAAAGCTTGAAAGTAACCTCATTACATTGATTAG 7501078 37 100.0 33 ..................................... ATGAGACGACGACGCACTGATGATGATGATTTT 7501148 37 100.0 36 ..................................... AAAGGATTCTGCTCAACAGAACAAGGACGTTGTAAT 7501221 37 100.0 39 ..................................... AAAAGTCTTTTTGATCGTGGTGAGATTTTTCAATCCCAA 7501297 37 100.0 33 ..................................... GGGGCATTTTGCCCCATTCTTCATATTATCAAA 7501367 37 100.0 36 ..................................... CCAAGACTTTGCTTTGCTTAATCTGCGTAAAAATGG 7501440 37 100.0 34 ..................................... AAAAATTGACTACGCAGGTGCAGCCACCTCAGCA 7501511 37 100.0 35 ..................................... CCTAGCACTGTGGCGATACCTGTGATCGCTCCGAA 7501583 37 100.0 35 ..................................... CCTTAATAGGTGCAACCTCATTTTCTAAAGCAAGG 7501655 37 100.0 35 ..................................... TGGCTTCAAGCTTGGGGAATACAAGAGCCGCTTAA 7501727 37 100.0 37 ..................................... GGGTATCTGCGGACGAAGAATAAAATGGGAAATTCTG 7501801 37 100.0 42 ..................................... TTTTAGGAAAATCTTCTTCACGAATCAGATACCTTGATACCT 7501880 37 100.0 38 ..................................... TTGTGGATCGGGGTTGGCGGGAAGAAATACACGATTAT 7501955 37 100.0 35 ..................................... GTATACAAGTTTAGTATAGGAGTAACTAACCTGTA 7502027 37 100.0 32 ..................................... ACATAAGATGCTTTGATAGCCTTGACCGCTTT 7502096 37 100.0 32 ..................................... GTTGATAGAAACACAAATCACACAGGTTAAAA 7502165 37 100.0 35 ..................................... ATCTTGCAAATCTTTTTTATCAGTGTTTTCGTAGC 7502237 37 100.0 36 ..................................... CAAATCAATACATGTCCCACGGCATAAGAATAAAAA 7502310 37 100.0 36 ..................................... CTCATTTTGAAATTTATAAGAACCGTCTCCCCCGCA 7502383 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 33 37 100.0 35 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : AATATGCCAGGAGCAGTCCCTTGGACAGCAACTCAAGCACTGAATAACAGTACATTACCTTATATTGTCCAGTTGGCGAATTTGGGAATTATGGCCCTGGAAGTTAACCCAGCTTTAGCTAAGGGTGTGAATGTGCAGAATCATCGCTTAGTGCATCCGGCTGTACAAGAGGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGTATTAGGTAGGCGATCGCTTATTTTAATAGAGGTAGCGATCGCTAACTAGACTAATTTTCTTGTCTTATGCGCGGATGGGTAGGTGTACAAAATCAGAAAGGGCAAAAAATGCCCGATGCTGCATCTATACAAGGTTTTCAGGGCACTAGTATTTTAAAACTATCCGCGCACCTTATGGGGATTAGCTTTCAGCGATTTGTATCTTGTGCTATGACTATTTGCTGTGTTATGATTCACTCATTCGCGCAACTGCACCTTGAAAACCAAATACAACAGGGCTTCCAGACCCCAGCG # Right flank : CGCTGTTGCGCCAAGGCACTGTCACTCTTCTCGTTTCGTAGATTGCAATAGGGTAAAATGTGAAGAATCATTTCTATAACTGCTTATTTGACAATTGACAGAGATAATTTTTTTACTTTGATATTTGTGGATGCCTAAAGATTTGAATATGTTTGTTAATACTAAAGTAAATCTCTCATGTTTACCTGCTTTTACTAAGTCGAAGATATATAGAAATCTTGCGCCTGTAATATTCGGTTTGATATTACCAGCATTCATGCCTGGTGTTGCAGGGGCAGAGACAGTGATGCAAAAAGTAGCACGGACAGGAGTATTAACGGCTGGTACAAGTAGAGATGCTTTACCTTTTGCATACTCTGACAGTCAAGGAAAATTGATTGGTTATTCTGTGGATATGCTGACTTTGATCCAGAAGCAGTTAGAGAAAGAATTAGGCAAAAAAATTAAACTTGAATTAGTTGGAGTTACCCCAGCAGAAAGGATTCCTAAGATAATTAACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //