Array 1 795-2744 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZWC01000024.1 Neisseria meningitidis strain Neisseria meningitidis isolate B276, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 795 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 861 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 927 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 993 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1059 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1125 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 1191 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 1257 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 1323 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 1389 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 1455 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 1521 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 1587 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 1653 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 1719 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 1785 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 1851 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 1917 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 1983 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 2049 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 2115 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 2181 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 2247 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 2313 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 2379 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 2445 36 100.0 30 .................................... AGAGCGCGCTGAGGCGTTCGTGGGTTTGGA 2511 36 100.0 30 .................................... TTGGTGGTCGCGCGTGTTAGACGGCAGCTA 2577 36 100.0 30 .................................... CTTTGGTCAATGCGGTGGCGATTCCGTGGT 2643 36 100.0 30 .................................... TTTATCCGATAAGTTCCCGTGCCGAAAGGT 2709 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.4 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //