Array 1 9511-6611 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNCE01000038.1 Streptomyces capillispiralis strain JCM 5075 sequence38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 9510 29 100.0 32 ............................. TCTTCCACCGACAGACCCGCGGCCTCAGCTGC 9449 29 100.0 32 ............................. TGCCCGTCGGCCTGCCCGGCCTGAAGGTGCGT 9388 29 100.0 32 ............................. TAAGTCGGTTGCCTAAGGCAACCAAATGGGGA 9327 29 100.0 32 ............................. CTCGCGGCGTGCGCCACGGTGTACGCGTAGTC 9266 29 100.0 32 ............................. ACTCTGTGCTCGCGCACGCCAACCCCTCCGAA 9205 29 100.0 32 ............................. ATGACGCCAACCGAGTTGCGCAGGTGCGTGGG 9144 29 100.0 32 ............................. GTCGGCGGGCGGCCGCATCAGGTCCTCGAACC 9083 29 100.0 32 ............................. TACGCCACGCACCTGCTGAAATCGGTCCGCAC 9022 29 100.0 32 ............................. TCTTCATCGCCCTGTACGTCGCACACCTGCTG 8961 29 100.0 32 ............................. CCTGTCTCCCGTGCGGTCTTGGCGTCGTGGCA 8900 29 100.0 32 ............................. CCTGTCTCCCGCGCGGTCTTGGCGTCGTGGCA 8839 29 100.0 32 ............................. TCCCCGCAGAGGTCCCCGCAGAGTCCCCGCAC 8778 29 100.0 32 ............................. ATCGCCGCGCGTTCCTCGGTCGAGACCATGCC 8717 29 100.0 32 ............................. TGCGTGTGGGAGATGAAACGCTTGGTCCCGGA 8656 29 100.0 32 ............................. TGCACGTCGGCGGCGAGGGTAGTGCCGGAGTC 8595 29 100.0 32 ............................. TCGACCGGCAGGTCGGACCACACAAGGTGGGT 8534 29 100.0 32 ............................. CGTGTCAGTAGAAACTGAGGGCATGTCGAAGT 8473 29 100.0 32 ............................. GGATCTCCCGCAGTGAAGGCCCGGACGCGCCG 8412 29 100.0 33 ............................. ATCGTGGTGCTCGGACCGGGCCAGACCCCGGAG 8350 29 100.0 32 ............................. GCGCGGCGCTCAGGGACCTCCCAGCGCTCCCA 8289 29 96.6 32 ....................A........ CCTGTACCGCTGGGGTTGGCAGGAAGGCCAGT 8228 29 100.0 32 ............................. AAGACCGACGTCATCAAGCGCATCAAGCTGGG 8167 29 100.0 32 ............................. GTCCGCGCCCTGCGCGGCAACCCTGGCGGCCG 8106 29 96.6 32 ...........A................. GTCGACCAGACCACACGCGGCGCTACGCCGTT 8045 29 96.6 32 ...........A................. GCAGAGCTTCAGATCACCGTCGTGCGCATCTG 7984 29 96.6 32 ...........A................. GCCATGGCCCGCGCCGGCCTGTCCATCCCCCA 7923 29 93.1 32 ...........A..T.............. GCGGCCGCGACGCCGCCGACGCCCAGGACGAC 7862 29 96.6 32 ...........A................. GCCCCCGATACGTTCCGGTATTGGTAGGTAGC 7801 29 96.6 32 ...........A................. CCTCCGAACTGGTTCAGGACGCGGACCTGGTG 7740 29 96.6 32 ...........A................. TCCGCCGGGTAGTCCGCTGACCTCACCCACTC 7679 29 96.6 32 ...........A................. GGCCCTCGGTCCACACCGGACCGGGGGCCGTT 7618 29 96.6 32 ...........A................. GCGACCAGCCTGCCCAGGTGCCACGTCATGAG 7557 29 96.6 32 ...........A................. ACCTGCGGCTCGGCGACGTACGCCTCGCAGAA 7496 29 96.6 32 ...........A................. TGTACGAGGGCGACGGCGTCACGCCGATCGCG 7435 29 96.6 32 ...........A................. CGACGCCGTGCGAGCACACCGGGCCCGGATCG 7374 29 96.6 32 ...........A................. GGCTGCCGGCGCCCCGGAGACGGAGCGGACCG 7313 29 93.1 32 ...........A.........G....... GGCGGTTAGGCGGCCGTTGTCTCCGAGCTTGA CAC [7301] 7249 29 96.6 32 ...........A................. GCCGAAGGGCCGCTCGACTTTGCCGGCCTGAG 7188 29 96.6 32 ...........A................. TGTTCGGCGTGCGAGGCAAGGGCGGCGGCCTT 7127 29 96.6 32 ...........T................. CCGTCGGCGTCCCGCCCTTGCCGTGCTCGGCC 7066 29 96.6 32 ...........A................. GTGTGTTTTATGCGGCAAGTCCTTGCGGGCTC 7005 29 93.1 32 ...........A..T.............. GCCCAGTAGGGCGTGCGGATGAGGTAGTAGCC 6944 29 96.6 32 ...........A................. GTCAGCTCGGCGCCGACCGCGGCCGCGGTGAC 6883 29 96.6 32 ...........A................. ATCTACGGATGATCGGGGAGGCGTGTGGACTT 6822 29 96.6 32 ...........A................. CACGTCACGGTGCGGCCGCCGCTGGCCATGTA 6761 29 93.1 32 ........T..A................. GCTCCCCGATGTCCGGCGCCCCACGGTCGTGG 6700 29 96.6 32 ...........A................. GATTTGAGCCGTTCGCTGATAGGTAGGGGGAT 6639 29 86.2 0 ...........AT..............GG | ========== ====== ====== ====== ============================= ================================= ================== 48 29 97.6 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CGGCGTCAACTACGACGGGCCCGAGGACTACGGAGACGAACTCTGGTGACCGTCATCGTCCTCACCAACTGCCCCGCCGGACTCCGCGGCTTCCTCACGCGCTGGCTGCTGGAAATCTCCGCCGGCGTCTTCGTGGGCAACCCCTCAGCCCGGATCCGCGACGCACTCTGGGACGAGGTCCAGCAGTACGCAGGCCAAGGCCGCGCCCTGCTGGCCCACACCACCAACAACGAGCAGGGCTTCACCTTCCGCACCTACGACCACGCCTGGCAACCGACCGACCACGAGGGCGTCACCTTGATCCGCCGCCCCGCCCCGAACAGCCCCGCTCCCGACCCCGCCCCCCGCAACGGGCCGCCCTCCGGATGGAGCAGGGCCGCCAAACGCCGCCGCTTCGGGAGAGGCTGACACACATCGAATCCCTTATGCCCTATTTGCCGGAACCAAAGAAAGTGCTCGAAAACCGCACCCTGCGCCAGTAAACCTGCAGGTCACCCAGT # Right flank : ACGCCTTCGCGTCGCTGTCCTTCCGCCTGAACACACGTGGCAGCTCCGGCTTTCCGCCACCTGTCTGTGCACCCCGCTTGTAGAGTGACGCCGCATTGTGGGGCGTTGGGCTCGCCGTGTGGACGCCTTTGCTCCGCCGCACGGGTGACCTCACGGGCGAACCGTCCCGGCCAGTACCTGATGCCCCGTATGAGTAGTGCCGTGATCAAAAACGTGATGCGTGCCGCGGCCGTCGCCGCTCTGGCCCTCTGCCCGCTGGCTACCCCGGCCTCCGCTTCCAGCGAGAAAGGCCCGGCACGGGCTGCGATCGACTGCCCGTCCGGGTACGTGTGTATCTACCCCGAGATCAACTTCGGCGGCCAGCCCTGGGTGCGGCGTGCCGCGGACGGCAGCGTGAAGGACCTGCCCTCCGCGATCCGTGACCGCGGCAGCTCCATCCGTAACAACTCCGACCGCACCGCCCGCGTGTACGAGAAGCGCAACCACTCCGGGCGGTGGGT # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 19224-21387 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNCE01000038.1 Streptomyces capillispiralis strain JCM 5075 sequence38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19224 29 100.0 32 ............................. GCACGCGAACCCCCCTGCTGCCCTGTGCAGGG 19285 29 100.0 32 ............................. GCCCGGCAAACCCATGGCCCCGCCGCGCACCC 19346 29 100.0 32 ............................. ATCGCCGTGGCCGCGCTCGCCGCCGTACTGCC 19407 29 100.0 32 ............................. CAGCCACGGAGCAGGTCGGTACTCCCGTCCTT 19468 29 100.0 32 ............................. TGTGAGAGGCCCAGGTAGGCCATGAGGTCGGC 19529 29 100.0 32 ............................. TACGGCGACACCGTCCACATCACCTCCCTGGT 19590 29 100.0 32 ............................. TACGGCATATGGGGCGGCATGACGGCGAAAGA 19651 29 100.0 32 ............................. GAAGACGTGAGCGCAGATCTGCAGCCGGACAT 19712 29 96.6 32 ............................T CAGGCGTGTGCGGTGGCGTGGCGGGCGGCGCA 19773 29 100.0 32 ............................. GCCCACAGCACCGCGCGCATGGCGGTCGGATC 19834 29 100.0 32 ............................. GTGCGCATGGCACTCCGCACCTCCGACTCGTC 19895 29 100.0 32 ............................. GGCACCCACTTGCCCTCGCCCGCGGGGACCTT 19956 29 100.0 32 ............................. CTGGGCCGGGCGTCGCTGGACTTCCTGGTGGC 20017 29 100.0 32 ............................. AGGCCGAGGCTGGCTGCGGCAAGTTCCTGCTC 20078 29 96.6 32 ............................A GATGATGTTGTCGCCCTTGACGTACCGCTGCC 20139 29 100.0 32 ............................. GACAAACCGATGGACTGGAAGGTCCCGATCGG 20200 29 100.0 32 ............................. TGCTGGCGGAGCACCAACTTCGCGACCAACTT 20261 29 100.0 32 ............................. GGGGTGTTGCGGCCGAACTGGCCGTAGTACGG 20322 29 100.0 32 ............................. CGGGTGGTGCCGCCTGTCGCGTCCCAGGTCGC 20383 29 100.0 32 ............................. CGGGGAACCGCGGGCATTGTCGAGGCCACGAT 20444 29 100.0 32 ............................. TGGCCGGGCCACTTCGCGCGCTACTGCACGAG 20505 29 100.0 32 ............................. ACCCGGTCCTGCACATCCTGCTGGAGGTCGCG 20566 29 100.0 32 ............................. GGGCTCCCCAACGTCATCCCGTCCGGGACGCC 20627 29 100.0 32 ............................. GACGAAGGCGTCCGCGTCTGCGTCGATGGCGA 20688 29 100.0 32 ............................. ACGGTCCGAGCCTGGGCCAAGCCGGGGGCTCC 20749 29 100.0 32 ............................. GACCTCATGTGCTGCGTCGAGCCTTGGCAAGG 20810 29 100.0 32 ............................. GCCGCGAACTTCCGGTCGGTGTTCGGTGGCGG 20871 29 100.0 32 ............................. TCCGCATGGGTCGAGGGGTTTTGCCGTTGTGC 20932 29 100.0 32 ............................. TCCGGGATGAGTCCCTGCTCGTCGGCGGTCAC 20993 29 96.6 32 ....................A........ TTGCGGGGGTTGCCGTCCTCCTTGTAGCCGAA 21054 29 96.6 32 ......................C...... GACGAGTAGCCCGCGGATTTCCAGGGCCCGCA 21115 29 100.0 32 ............................. ACGGCGATGTGCCCGAGGGCCATGCCGTTCAG 21176 29 100.0 32 ............................. GACCGGTCGCTGAGGATCTGGCGGGACGACAA 21237 29 96.6 32 .........C................... AACGTCGTCCGCCCCCTGAACCGCGACACACC 21298 29 93.1 32 ...........G....A............ ACCCCGTCGTCGCCGCCGACTACCCGGAGGAA 21359 29 82.8 0 .....................CGC...TG | ========== ====== ====== ====== ============================= ================================ ================== 36 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGCCGGCGTGGCCTTGCCGATGTCATGCACTCCGGCGAGCCATACGGCAAGGGCCCGCGCATCGGGCTCCCCCTGAGGCAACGCCTCGGCCACCAGACCCCGCACCCCTACGGGCAACCACCGGTCCCACAACAGGCCGGCCACCGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCAACCGTCGGTGTCGCGGTCATGCTTGGCCCATACCGACCTAGCCGGCTGCCCGAGCCGACGCAACAAAGCGGAACGGCCCTTCCCCCCAACGCTCATGAGGGATTGATACAGGGAAAGCCCGCCCCCACACATCAAAACGAGCAAACATAATTGTCTGTAGGGAAACAGCATCTCCAAGACATAAGATGATCGGCTCACCTGTGGGTCGATGAGAAGCACCTACGAGACGGACGCTATCCCCCATGTCCTATTTGCCGGAATCTGCGAAAGTTGCTGAAAGTACGCCTCTGCAGCCATAAACTCGCAGGTCAGCAAGT # Right flank : GGGTCGCGCGGCGGGCGCAGGGCACCGGCCGCCGCGTCGAGGTAGTGAAGATGTAGGGATCTCCGAATCGTTCACCGCAACCGTGAGCCTTGGCTACGGCAACGACCACGCCATCAGCTCGCAGCGGTCAATCGGTCAAGAGCAAAACCTGGCCACAAGATCCCCTCAACGCCGATGCCTTCGAGCGTCTCGTACCAGAGCAGGGCCTCGTCCAGGGCCGTGGTCGACCACACCGGCACGATCGGCTGACCGACGTCGGCGAGCACGTCCAGGAGGACCTGGCGGCGCTCCGTGTACGGACGCGGCCGAAGGTCAGGGAAGCCCGCCGCAGGGTGGGCCAGGATGTCGAACGCCACGTACGTCGCCGGGTGTTGGTCGGTGAGCTCCCTCGCGCGGCGAGGGCTGGACAACGCGCGGGACTGCGCAGCGGCGAAGCTGACGTGCAGGCTGCCGTCGTCGGCGGCGAGGTACACCACGGCCTCGCCGTCCAGGATTACGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //