Array 1 27282-27782 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NPOO02000011.1 Enterococcus faecium strain JB00008 Scaffold_0011_2183594bp, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     27282	    36	 100.0	    30	....................................	TTTTTCATGCCATCAGTATGTCGTTGATGC	
     27348	    36	 100.0	    30	....................................	CGTCATGTTCTACTACTACAGCACGTCCTT	
     27414	    36	 100.0	    30	....................................	ACATGGTTAAGTTGTATAGCGGAGTAACTG	
     27480	    36	 100.0	    30	....................................	ATGGAAGCATTAGTGTTGATCGATTTCGCC	
     27546	    36	 100.0	    30	....................................	AAAAAATCGCTGGTAAGCTAGAAACTAGAG	
     27612	    36	 100.0	    30	....................................	TGCTTTTATGTCTTTGCCTTCTTTAAACTG	
     27678	    36	  97.2	    30	..................................G.	ATCTTTTTCCTACGATTTCTTTACCTGAAG	
     27744	    36	  91.7	     0	.........................A....T....A	|                             	AC,G [27772,27778]
==========	======	======	======	====================================	==============================	==================
         8	    36	  98.6	    30	GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC	                              	       

# Left flank :   GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATTGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATAAGCGAAGTGCAAGATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTATGAAACATTGACGGAAAAATTTTTTCTGCGAG
# Right flank :  AACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGGTGTTTTTCATATGAGTGGACGGAATTATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGA

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.20,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//