Array 1 296203-295889 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAV01000055.1 Stappia sp. TSB10GB4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 296202 37 100.0 33 ..................................... CCACAGGGAGTCAACGACAACCTCCTTGTTTCG 296132 37 100.0 33 ..................................... TCTTTCGGTGCCTCCCTAGGGGCACAATAATAG 296062 37 100.0 31 ..................................... ACAGGAAGTCTGGCGATATGTACCAGAAAAA 295994 37 100.0 32 ..................................... CACGAAAGCCTCGGCAGGGATACCCTGCCCGG 295925 37 89.2 0 .................................CCCT | ========== ====== ====== ====== ===================================== ================================= ================== 5 37 97.8 32 GTCTGACGACCACCGCGAATGTGAAGCGGATTGAGAC # Left flank : GATCTTCGGTGTCGGAGAGCGTATTGGCGAAATTGACGCCCTCGGCGCGCACCAGCCACCGCGTGGACCCTTGCGTGGCCCCCGGCGGGAAAGAGCTGTCATCTGTAGAGGTCGAGGCGGGATGAGACGCGGTCATCGGCAACCCTCTTAAATCGATAAACGAATGACTGTCGCGGGATAGTAGAAGGCGCCTTTGTCTGTCCGCAAGATCCTGGATTGCAAAATCTCGCGTGGGATTTGCGGGCGGGTGTGTTGGCGCCGGGCAGCGCCCGGCCACTGACGGATTTGGGGGGAGGGCGGGCACTTCGCGCGCTTCACCGGATGGCGGAAAACACGAAAAATACCACTGGAATTTTAATAAGATACTATAATAATTGAAGATATATAAACTTTACCCTCTTGAGTTCGATATTTGTTCTTTCGGATCGGCTGGAATTTGACCTTCTGCTGGATATCGATGTTCGGAACCACTGCTTGACAAGCGAGAAAAATGGGGGGAG # Right flank : TGTCGTGCGCCGGTTCGCGCGGCATGGTTGCGCCGGGCGAAAGCCGATCATCAAGCGGGCGCGGGGGCGACATGACGGAGGCGGCAGGGGCCGGCGCGGAAGGGTTTGACCGCGAAACGGGCGATGGCGACCACGACGCACGGCTCGAGGGTGCGCCGTCCGGTCTCTACCGGCCGGATCTGTGGCGTGCGGCACGGGACATTCCGGTCGCCGCCGCCACGCATGTCTTCATCTGGCCACTCGTCCTTCGAATTCCTGACGACCGCGCCGGCGCGTCCGATTTCGCGCTGAAGATGCGTCGGAAAGTGATCCGCGACCTCTTGGCCGAGCAGGGTGATGGCGCCCCCGTCTGGGAGGAGGTCGAGGATCTGCTCCGCCACGCCGATCCGCCATCGCCGATGTCGACGGCCGCGTCGACCGAGCCTGTGGACCGCGCATCCGGCGCCGAGCCGGACGACCTCGCCGAGCGGCAGGTGGCCTATGCCGAGTTCGTCTATTTC # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGACGACCACCGCGAATGTGAAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 304577-304128 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAV01000055.1 Stappia sp. TSB10GB4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =============================== ================== 304576 38 97.4 30 A..................................... TCAGTCCATTGCAAAATGCTCTGGTCCTTT 304508 38 100.0 31 ...................................... ACTGCCGGACCTCCGGCCGATGTCCTTGTTG 304439 38 100.0 29 ...................................... TACAGTCTTGGGGGTGTGTCCACCGCCCT 304372 38 100.0 30 ...................................... AGAAATTTGAGTTTGTGCTTCCGCGGTTCC 304304 38 100.0 31 ...................................... CTGCTCGCACCAAGTGCGAGGAAGACCTTGT 304235 38 97.4 31 C..................................... CGTTACTCTCTTTCTCCGACCGAGAGCCCGA 304166 38 97.4 0 ...................................A.. | T [304133] ========== ====== ====== ====== ====================================== =============================== ================== 7 38 98.9 30 GGTCTGACGACCACCGCGAATGTGAAGCGGATTGAGAC # Left flank : GCCTGCGCCATGGCCGATTGCGCCACCCGGTCGCGCACGGCCGGGATGCGCAGCAGCCGCGTATCGCGCTTGCCGGGCTTGGGGATGCGCACCTCCCGCAAGGGTTGCGGCCGGTAGCGCCCGCTGCGCAGATCGCCGGAGAGCACGGCGAGGCGCTCGCCGACGGCGACGGAAAACGACGACAGCGTCTGCCCGTCGCCGCCCGCCGCCCCGCCATTCGCCCAGGTGCGTGCCCAGCCGGCGCCGAGCCCGGCCACGCTCGTGGCCTCGGAAAAAAGCGCTGCACCATCAATGCGCTGCGTCAACCGGTTGGGCTTTGGCATGGGTGTCTCCGGACCAAAATACCACTGGAAAACTCTTTATGCGTTGAGAAGATTAAGCTAATAACGACTGAAGGCAAGAGTGTTCTATATTTGTACTTTCGTCGGATCGAGTTTTTCGGCCTCCTGCTGGATTGATGGGATCCAGATTTCGGATTGACAGGGAGGAAAAATGGGGGG # Right flank : GAAAACGGCCCGGCGAAAGCGCCAAGCCGGTAGTTTGTGCGGATCGGAGCGGAAGCGCCGGTGACCGTCTGATCAGTCCCGATAGGGGAATGTGAGACCGGTCAGATGCTGTGCGGTGAGATAGCGTGGCCGCGCGCGGTCCGGTTCCTCCCAGTCCTTATGCGTGTCGAGCTTGGCGGTCGCGCGCAGTTCCATATGCGCCTTCGGACCGTTCAGATACTCGGCCGCCAGTTGATGCGACGCAATTGGGGCGCTCAGGGTAAGGAAATCCTTGATCGGGAGGTCGTCGGGCCATCCCCGTACAGTGGCCGTCATGTGATCATGGAAGGCGTTGAGAAATGGCGTCATGCTCGCCGAGCCAGGCTCGAGCCATCCCTCGTGTTTTCCGTCCTTGAGTTCCCAACCTTTCGGCGCCTCCAGTTTTTTGCCGGCGGCCCCGTCGTTGCCGTGCAGCGCGAGCTTGATCCGAACGACGCGCACCTGGCCCGCGCCAGCGGTCT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCTGACGACCACCGCGAATGTGAAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 28157-26426 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAV01000035.1 Stappia sp. TSB10GB4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28156 29 100.0 32 ............................. CACCGACAGCGGTCAGAAGTCGTACGACTTCG 28095 29 100.0 32 ............................. GACATTGGCGCTCTCGCGGGCGCGGGCGGCGG 28034 29 100.0 32 ............................. GTATGCTGGAAAGTCTTGATGACGCGCTCGAC 27973 29 100.0 32 ............................. CATGTTCACCTGTGGCGCCAGCCATAAGAACG 27912 29 100.0 32 ............................. CCGAGCCGCTGCAGCTCGTCCACCACCACCTG 27851 29 100.0 32 ............................. TTCGTCTTGGTCGGCTCCCCCGTAGTCGTGAA 27790 29 100.0 32 ............................. CCCGTCCGGCCAGGCACCGCGATCCAGATAGA 27729 29 96.6 32 ............................G CATAGACGCAGTTGAGGCCGAATACCTCCTCG 27668 29 100.0 32 ............................. GCCGATCTCGATGACCGCGTCAGCCAATTGGC 27607 29 96.6 32 ............................T TGCGCGCACGGCAGCGCGCCGTCCGGGCTGAT 27546 29 100.0 32 ............................. GCTTGCCGTCGTGCGGCAGGCTATCGCAAAGG 27485 29 100.0 32 ............................. AGGCCGGTTTCACCCAAAGGAGTCTCCCATGA 27424 29 100.0 32 ............................. TCTCCCTAACCGCGCCAACCGCCTAACCACTC 27363 29 100.0 32 ............................. CCCTGCTCGCCGGTCGCGGGTTTCGACGGCTG 27302 29 96.6 32 ............................T CGACCACGTATGGTCCGTCATCCTCGACCTTA 27241 29 100.0 32 ............................. CTCCGACCACCTCCAGCCGCAACTGGCGGATG 27180 29 100.0 32 ............................. GACCCGAGATTTCAGATCCTGATGGTCCAATG 27119 29 100.0 32 ............................. CTTCGAGCACCGCGCCGACACGAAGGCCGTCG 27058 29 100.0 32 ............................. TCCACCCAGGGCCGCACACCTGGCTCGTGCCG 26997 29 100.0 32 ............................. GATGATGTTGCTCATCACACGACCCTCTTGTC 26936 29 100.0 32 ............................. GAGCCCATGCGCGTCCCGGGCAGCCGTCAGCG 26875 29 100.0 32 ............................. CCGCAAGGCAGGCCCGCAACAGGTCCCGGTCA 26814 29 100.0 32 ............................. TCGAAGCCGTTGGACCGGCTGTCCGCCTGCAT 26753 29 100.0 32 ............................. TGGTGGCACGACTGGTCTCGCGCACGGTGGAC 26692 29 100.0 32 ............................. TGTCCATCTACTTTGCATACGACGGACTCTAC 26631 29 100.0 32 ............................. AGACAAAGGCCCGGAAAACAGCCGGGGGGGGC 26570 29 100.0 32 ............................. CAGACGCTCCAGCTCGGCGGCAGGCGCCGCCA 26509 29 100.0 26 ............................. ACCGGAGACGGCGGTGGCGGGAAGGC 26454 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.5 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : GTCGAGCGGCTGACCCGGCGGCGTGCGGCGCTGCTGTTTCGCCAGCGCTCGGTCATTCCCTCGATGATCGACCGTATCAAGTCGCTGATCGGCCCCGGCGAGGAGAACGACACGGAGGCGCCCGCCTGATGCCGATGGTGGTTGTGATCACCCGCGATGTCGAGGGGCGCTACCGGGGGTTTCTCGGTTCGGCGATGCTGGAACTGTCGGCCGGTGTCTATGCCCATCCGCGCATGAGCGCGGGGGTGCGCACGCGGATCTGGGATGTGCTGCGCGACTGGCACGGCCAGTTGCGGCGTGGCAGCATCGTCATGACATGGGTGGACAGCTCCGCCAATGGCGGCCTCGGCCTGCTGGCGCTCGGCGAACCGCCGAAGGATATCGTGCCGCACGACGCCATGCTGCTGGTGCGCCGGCCCTTGCCGGAAATGAAGGGTTTTGACTGAACCCTCCATTGTTCTTTGACATTGTCGATAGGAATCAGCATCTTGGGCCCTAGG # Right flank : TGGTCATCGGGGTCGTGTGCCGAGAGTTCGGAAGGCATTTCGAACTCGGAGCCAGAACCACGACCGCGCGACCGGCCGGTCAGCCCCCCGGCTCCGCGCTTGCGCGCGGTCGAGGTCACGGCAAAAGGGATACGAGGCCTACCCTTTGCATTGGCCGTCATCCCGGCCGCGGGCGCAGCCGGAGAGCCGGCGGGGCCAACGCCGGCTCACGGTCTCACAACGACCAGGGGCCCAACGGCCTGCGTCCCGCCAGCATCATGACACAGCCCGAACATACAGGGACCCATTGGCACCCCCGGCAGGTGTTGCCCGCTCTGCCCTCTCCTTGCGTCTTCCCGGACGAGGCCGAAGGCCGACGATCCGGGACCGGGGAGGCACGGCGGTTGCGGTGTCTCGCGCGCGCCGTATGCTCTCGGCTCGCCGGTGCCGGGGCTTGCCGGTGCCGGAGCTTGCCGGTGCCGGGGCTCGCGATGCCGCCCGGAAGGACGCAGGGCAAGCGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 39880-37594 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAV01000035.1 Stappia sp. TSB10GB4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 39879 29 100.0 32 ............................. TCGGTAAGAGGCCGAAGGCCGCGAAGGTCATG 39818 29 100.0 32 ............................. GGCGCGGGCATCAGGACACCTCCTCAAGAGCG 39757 29 100.0 32 ............................. CTCATACTTGCCGCTGATCTGGTCGCCGACCG 39696 29 100.0 32 ............................. TTGAGATTCTCGTGCCAATCGCGGCCGCTCGC 39635 29 100.0 32 ............................. TTCGACATGTTGCGCGGCGAGAAAACCTGAAC 39574 29 100.0 32 ............................. ACCCGCTTTCAGTAGGAGTAGCAGCCATGGCG 39513 29 100.0 32 ............................. TCGGCGAGGATAAGGGTTTGAGGCCGCTTGCC 39452 29 100.0 32 ............................. GTGATGAAGACCCTCGGCCGGGACGCCTATCG 39391 29 100.0 32 ............................. CCGTCATCCAGCGCGTTCTCCAGGGTGACGGT 39330 29 100.0 32 ............................. AGACGATGGCGTCATCGACATCGCCGGCAAGC 39269 29 100.0 32 ............................. CGAGGACCAGGACGAGCGTCCGGACCCTTTGA 39208 29 100.0 32 ............................. CTGGCTCTCGACATCCCCGAGGCGCGGGTGGC 39147 29 100.0 32 ............................. GGGACCATGCCCGAACAGCTAAAGAGGATAGA 39086 29 100.0 32 ............................. AGGGATGCGATGCCCTTCGGCAAGGCGCGCCT 39025 29 100.0 32 ............................. GGAAACACCATGATGGCCTCCGGTGTCGATAA 38964 29 100.0 32 ............................. ATCAGGCGGCCGTTGATGTAGCCGGACATCAT 38903 29 100.0 32 ............................. GCCAAGTTCGCCGATGTGGTGCAGACCGAGAA 38842 29 100.0 32 ............................. CCGTTGTGCTCGACGCCGTCGAGCTGCCGGCC 38781 29 100.0 32 ............................. ATCGGCCAAATGGCCTTGATCCAAGCTTCCCA 38720 29 100.0 32 ............................. TGAGGAGACTACCCTTGACCCAACCCGCCAAC 38659 29 100.0 32 ............................. GAGATACCTGCCCCTGCTCTGGTCGGACGAGA 38598 29 100.0 32 ............................. TGGAGCCGTGGGAAGTCTCCATGCTGCTGATG 38537 29 100.0 32 ............................. TCTGAAGAGTTCGTCGCCTATGAGCGCTTCTC 38476 29 100.0 32 ............................. GGCACCGGCGGCGTGGGTTTTCGCGACGGCGC 38415 29 100.0 32 ............................. GGGTTGTAGCGGTCCTGGATGGCCTGAACCTG 38354 29 100.0 32 ............................. CACGCCGGCACCTGCTCGAAGAGCACCCAATG 38293 29 100.0 32 ............................. GTAAGGGTGAATTGCCTACTGCCGCCTATCGG 38232 29 100.0 32 ............................. GGCATACTGGAGGACGAGCTTCGCGACATTTT 38171 29 100.0 32 ............................. CGGGCTCAGTGAAGAAACGCTTTTTGTCGGCC 38110 29 100.0 32 ............................. ACGAGGCCCTTGCGCCGCGCACGCTGTTTGCA 38049 29 100.0 32 ............................. CATGCCAGCCCAGCTCTCGCAGAACACATCCG 37988 29 100.0 32 ............................. ATCTACAAGGTCGCGGGCGACGACGTCCTGAC 37927 29 96.6 32 ............................T CCGCCCACGGGCGCCGGCGGGGCCGCCGGATC 37866 29 100.0 32 ............................. TACCTCAACGAGAACCGGGTCAACACGATCGT 37805 29 100.0 32 ............................. AGCCCCTGCCGATCGACCCGCTGTCCTGCCAT 37744 29 96.6 32 ..........................G.. TGCCTTACTTCCCGCCACATCGGGTCGTGGAT 37683 29 100.0 32 ............................. CAGCCCCTCAGGGGCGCCGCCGTCCGGATAAT 37622 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.7 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : GCGGCTGTTCGCCGAAGGCTATATCCGCGGCGTGCGCGCGATGATCGCCCCGGAGAAGGTCGAGCGCGGCTCCTTGGTGCTGGTCGGCGTGGTGCTGGACCGCTCGACGCCGGAGAGCTTCAGCGAATTCGAGGCGGCGGTGCGCAAGCTCGCCTTCGTGCTCGACTGCCATCTGGTCGCCGGCGATTTCGACTACATGCTGAAGATCCGCGTGCGCGACATGGCCGACTTCAACCGCCTGCACGGCGACAAGCTGATCGCCCTGCCCGGTACCCGCCAGACCCGGACCTTCTTCGTGATGAAGGAGGTGATCGATAACGCCCTGCTGGAGTTCTGACGCGCGCGGGACGTACCGGCACTGGCACGGCACGCGGCCAGCTTGACCCCGGCCGGAGCCCGCCGATAGACTTGCCGCGCGCGGGGCCTGCCCCTCGCTTTTCAAACCGGCCACCCGGTGTTCTTTGACACTGTCGAGGAAAGTCAACCTCTTGGGCCCTAGG # Right flank : ACTCCCGCCGCCACCCCCAAGATTTCGGCGCTGGCGGCCAAAATGACACAGGCCGAGCATGCACACCTAAAGGCGGAGGCCGCAAGGCGCAGTTCCAGCATCCAGGACATGGTCAAAAGCTTACTGAAATCCGAAGGACTGATCTGATGCACCTCACCCACCTTTCCCAAGCCCTTGTCATCCGCGCCATATCCCGCCCGGATGGCAAGACCATCATGAATGGCGCGGCGCTGGCCGTCCTGCGCGCCGGCACTCTGACCGGATTGCACGACGATCACCCGGCGGCGGCCGGCGCTAAGGAAATCCGGCGCGATATCATGGCGCTGACCGTCGCGGACATGCCGCCGCCGACGGATCTTGTCGCCATCCTGCTGGAGACCCTGTCCCAGCGCCTCGGCGGCCTCGGCCACGCCGCCGCGTGGCGGTCGATCGGCATCAATCCCAATCGCGGACGCGACCTGTTGGCCCGATACTCCCGCGCGGTCGACTGGCCCATATGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //