Array 1 169370-168015 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRBM01000009.1 Chryseobacterium contaminans strain DSM 27621, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 169369 47 76.6 28 .GAA.A..G...A..T....T..........A.......A.....A. TATGCTATTAGAGAGTAATATGTTGCAG T [169363] 169293 47 89.4 30 ...A....G...G.......T..........A............... GATCCATCTCTAACTCCAGTTAAAACAGTA 169216 47 100.0 30 ............................................... ATAGGCTTTCCAGTTGGCGTATCGTTTATG 169139 47 95.7 30 .....................................C.......A. AGTATTCTGACCGCTATTGTTACCGTGCCA 169062 47 97.9 30 .....................................C......... AAGGTATCAATACAGAACGTAGGATTAAAG 168985 47 100.0 30 ............................................... GAAAGCCTATAACAAATTTCATCAAAGTGG 168908 47 100.0 30 ............................................... TATTGTAGGAGGCGTAGGCTCAGCGTCACC 168831 47 100.0 30 ............................................... TCCTATTTATATTACCTCTTATATCCATGA 168754 47 100.0 30 ............................................... TCCTATTTATATTACCTCTTATATCCATGA 168677 47 100.0 30 ............................................... ACTAAAGCGCCTTTGCATTATGCGCGTGTA 168600 47 100.0 30 ............................................... TTGCTCTTATCATCTGCTGTACTGGTGAAT 168523 47 100.0 30 ............................................... TAATACTCTACGCTTTACTCGCATGTCTTC 168446 47 100.0 30 ............................................... AAGCTGCGTTAACTTTTCATCGTTAAATGC 168369 47 100.0 30 ............................................... GTAGTGTTGATATAGCCACCGTAAACTCCA 168292 47 100.0 30 ............................................... TTGATAAAAATTAACAAATGAGTAGCCTGA 168215 47 100.0 30 ............................................... AACGGGCGCAAATCCATAATCACGAACGGT 168138 47 100.0 30 ............................................... ACCAGTTAGCATGATCGTACATATCCGTAT 168061 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 97.8 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : ACATCGAAGAAATCAGGGTTTTTAAGGTGGGCTTCAAGATCTGCCGGTTTTTTATCTTTTTCAGTTACTGATGCAGGATCAACTTTAATAGAAGTCATATCAATATTGAAGTTTCCGGCTACTACCTGTCCACCTTCAATGCTTAAATCTCCTGATTTTACATTAAGAGTTCCCCAACGTGGAGCAAAACCTCCTTTGTGGAAAGCTTTCCAGTTTACTACAGAAGCTGCAGTATCTACTGCCAATACTTCTCCTTTGCTTTCAGCAACGGCCTGCTCAGTAGCTACTGACGTCTCTGTTTTTTCTTTATTGGTACATGATGCTGCCATCAATCCTACTGCTACTAATGCGATTACGCTAATTTTTTTCATATTATTGAACTGTTTAAAAAGTTTATTGTTTTCGGGTACAAAAATAGAAAAACCTTGCGGGAGTCACCTTAACATACATCAAGAAATGTAAATTTTGCTACCGATGTTAGGAATTGTAACATGGGAAGG # Right flank : CTCAAAAAACAATCCACTGAAAATCAGTAGATTGTTTTTGTTTTTAGGATTTTAAATTTAAAATAATTCAAGCTGTTGAAAAGTTGGAGGGGGTTCTTCTTTATTTCTAGCAAAGAATATTTCAATATCTCCGAACTGCTTGTCAGTGATACACATAATAGCAACTTTTCCTGCTTTAGGAAGCATAAACTTTACTCTTTTAATATGGACTTCAGCATTTTCACGACTTGGACAATGTCTTACATACATTGAAAACTGAAATAAGGTAAAGCCATCATCAAGCAAAAATTTACGAAAGCGGTTAGCATCTTTCATATTGGCTTTAGTCTCCGTTGGTAAATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATATCAATTCAGGATAAGAGATCAATCGTTTTTCTCCTGTATAACATTTATACAGTGATGTAACTGTTGTTTTTACAGCAACCAACAATGGTCTGGTTTTATTATC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //