Array 1 1995831-1995500 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_012724.2 Burkholderia glumae BGR1 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   1995830	    28	  89.3	    32	...AT......G................	GGGATCTCGACGTATCCGTTTCGCATGACGCG 	
   1995770	    28	  89.3	    33	...AT......G................	CTCGCGGTAAGTCATGCCGCGTCCCCGTTCGAG	
   1995709	    28	 100.0	    33	............................	TCAGGGCGACGTCAGAGAATCCTGTTGAAGCGC	
   1995648	    28	 100.0	    33	............................	TGCACGCACTGGCCGGTGCCGTGTGCGCTCGTG	
   1995587	    28	 100.0	    32	............................	AGAGCAGCAGGCGCTCCAGTTCGCGCCGGTAG 	
   1995527	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
         6	    28	  96.4	    33	GTTCGCTGCCGTGTAGGCAGCTTAGAAA	                                 	       

# Left flank :   TTCCGAGGCGGTTTTCACCAGCGTGCGGAACGCCGCCGCGTCGAGCGGCTTCGGATTCTTCTTGTCGCGCCCCATCGTCCAGGGGCCGACCAGCGCCGGCTCTGCCTCGCCGTCCTTGATCATCGCGACGGCCCAGCCGTCGTCGTCCTCGTTCTTGATCACGCGCGCGGTCCAGCCGCTGTCGTGCCAGAGGCCGTCCTCGTGGATCGGGCTGTCGTCCTGGGCTGGGTCGGTATCGGTGGCGTGGTCGGTCATGAGGCGTCGGGCGCGGGTTCGGGGGCTTGGGTGGGCGGCTATTGTAAACGTTTCGATCGGCGGCAATGGTGCGCGCCGCCGCAGCTGGCCGTGCGGCCGGGTGGTGGCTGCTGAACCCTTTTTTCGGCAGAATGCGCGAGGGGCTGCAAAATCAATGGGTTAGCGAGAGGCGGGAAATTTGGGGGGTGCGAGGTGTCGGGCGGGAATTGGTTTTTGAATCAAGGGGGTAGGTGGGTTTTTGTTCA
# Right flank :  ATGCTCGACGCCGCTCCCGACGTATTCGCCCGCCGTATTGTTGGCTGGCGCGTCAGTTCGTCGATGGCCACGGACTTCGTTCTTGATGCGCTTGAACAGGCGTTGTACGCACGCCAACCAAACGCCGACGGGACCTTGATACATCACTCCGATAGGGGGTCTCAATACGTCAGCATTCTCTACAGCGAACGTTTGGCCGAGGCGAGTATCGAGCCGTCCGTCGGCAGCCGTGGCGACAGCTACGATAACGCGCTGGCTGAAACGATCAACGGCCTGTACAAGACGGAACTGATTCCCGCCCGCCGAGGCTGAGGCAAACTACTACAGGCAACTCAGAAATGCTGCTGAAGTGCCTGCATCAACTTAAACCAACCGGCCTCCACGATTCCCGGTGCGGTTCACTCGCTTCGAGCGACGTGCCTACATTCACGAAGCATTCCTCAAACTTGGCTGCTCGATCATCTGTTGGAACATCTTCAGACGAGCTGAGCAGGGTTTTT

# Questionable array : NO	 Score: 6.08
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGTGTAGGCAGCTTAGAAA
# Alternate repeat :   GTTATCTGCCGGGTAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.14   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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