Array 1 871539-870978 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR698972.1 Campylobacter curvus isolate MGYG-HGUT-01706 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 871538 30 100.0 36 .............................. TTTTTATTCCCAGTCCAAAAACAAACACCTTATCGA 871472 30 100.0 37 .............................. GTTCATTGACCTTTGCGTATTTAGGCCCGATGATTTG 871405 30 100.0 36 .............................. GTCGAGGGCAAGAGCGACATAATAAACGGCACCGAT 871339 30 100.0 36 .............................. GCGGTCAGCCAACGATCGAGTGGCTGGATAATAACG 871273 30 100.0 36 .............................. CTTTTCCTCCACTCCCACGGCGGGATAGGCTCTTTA 871207 30 100.0 37 .............................. CCCGCATAGAGGCGTCTCAAAACGAGATTAAAACGGC 871140 30 100.0 36 .............................. AAAAGGCTTATAGTTTTAAGCAAAAACGAATTCAAA 871074 30 100.0 37 .............................. AATTTATTAAAATGTTTACATAACATCAGGAGTTTGT 871007 30 96.7 0 .........T.................... | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 99.6 36 ATTAAAGATCATTCCGTTGGAATTTGAAAC # Left flank : AAGAGGAGATATTTGGTCCTGTAGGTGTCGTCATCAAATTTAAAAACGAAGAAGAGCTTTTAAAGATGGTAAACGACAGCGAATACGGCCTAGGCGGCGGGATCTTCACTCAAGACATCACAAAAGCCTTACGCGTGGCTCGCTCAATGGAGACCGGACGTGTTTGGATAAATACCTACAATCAAATCCCTGCCGGTAGCCCATTTGGCGGCTACAAAAACTCAGGCATCGGCCGCGAGACGCACAAGATCATCTTAGAGCACTACACTCAGATGAAAAATATCATGATAGACCTGACCGGCAAACCAAGCGGCTTTTATAAACAATGATTTAGGGGGATACACCCCCTAAATTTCAGACGTTGAAGCGCTTTTTAAGCTTTTGATAATGCTAAAATATCGATATTTGAATCATCATAAAATTTAAATATTAGCTGATTTTAAGGAACAAAAACATAGGGCTTGACTTTTAATAGGCTTAAATTTTCATATTTATGCGCT # Right flank : CGCAGGTTAAAAATTGATAAAATTTAGAATTTCTAGCGCAATCAAATCTTATAAAACGACGCTATCGCCATCGCTCTGCTTGCAGTTGCGAGCATGGCGAAGCAAAAATCGTGCTACATGTCTGGCGTCTTGCGGAGCGTATAAGATTCGTGAAGCGTTTGCAAAAAATATCAACACTTTTTTAAAATAGAGCCACTCATTTAGACTCAGACACCCGCAAATCCCGCAGGGTACGCTCCCTCAATACTAAAGGCTATATCAATAAAAATCGCAAATTCCAGCCTACGCTACCACCCCATCCTCATAAATTTTCACGATCTTTTTATGCACCATCAGCGAAACATACATTATCGCTCCGCCAATAAGCAGCCTCAAAAGATCCGCGTCTTTATGCCAGATCACTAAATTTACGATGATGGCGGCCGGGATGAGCGCGTTGTTCATGATGGCAAGCACGCCGCTATCGACCTCGCAAGCGCCTTTGTTCCATAGATAATACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAGATCATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 878427-878027 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR698972.1 Campylobacter curvus isolate MGYG-HGUT-01706 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 878426 30 100.0 34 .............................. TGTTTGACATACCACGCAGCAAGCTCGTCGAGTT 878362 30 100.0 38 .............................. AGATTGGTTTCAGTTATAGTAAGCTTGAATTCTACCTG 878294 30 100.0 35 .............................. CTATATCCTAGCTGATACTAATACATACACCATCA 878229 30 93.3 139 .........................T...T ATGGCCAATACCTAATTATTCCAAAAATTTAATACCTTGAAAACTGTATAAAAAATAAATAGCCTCTATTTCTAACCAACAAATACCAAATTTCTTTAGTCTATACTTGTTTGTAGTATAATTACGAGATATTTATTTG T,T [878200,878202] 878058 30 76.7 0 ...........AA.T.A..A.....T...G | T,T [878046,878053] ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 5 30 94.0 62 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTGTTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGCAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACCTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGTTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAACAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGAAATTTGATATTTTGGTGCT # Right flank : TATCGAGAGCATATTATAAGTATAATTCAAAACAAATATTTTATGCCCCTTAGAAGATGACATTTATGTAAAACTTTTAAAGTTCAATAGCAAGCACCTCAAAAAATAAATTTCATCAAAATACTTAAAAGTTAAAGACTAGCCAAAAACCAGTCAATGTACTTTATGTTTTAGTTAATATATCTAAAATTACTACTAATGCCATATGGTGAGCGTAGATCAAATAATGATATTCAAAAATATAAGGAGCAAGTAGTCCATGCTTAATACAACAAAACACACGAGTTTTATAAGATGGCACTAAAAATACTTTTTTCTCCGAGCGAAAGCAAGAGCACATTTGCAGGGGATAGCTACATACGAAAAGAAAATTTCACCTTTGCTAAGCTCTTTCATCTAAGGCTTGAAATTTTAAAAAAATACGCTTCATTCGTAAAAACGGCAAGCGATAAGGAGCTTTGCAAGCTTTTTGGTTTTAAAAATTTAGATACCGACGATAC # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //