Array 1 41586-42261 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADQVC010000003.1 Corynebacterium diphtheriae strain 02-12 NODE_3_length_182290_cov_37.321831, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
     41586	    36	 100.0	    28	....................................	GGCGGCGGCGTGGAAAATAGCTATTTAA	
     41650	    36	 100.0	    28	....................................	TATCCCGAAACTGTCAAACCTTTCAGTC	
     41714	    36	 100.0	    28	....................................	TCATCCATGTGCGGGTGCAGTCCGTGCC	
     41778	    36	 100.0	    28	....................................	TGTATTCCCCACCCTCGATAAGGGTGTT	
     41842	    36	 100.0	    28	....................................	GCTGTTGCCATCTCTCGTTGAGATTCGG	
     41906	    36	 100.0	    28	....................................	AGCGAGCAATCGCACAATTGAAAAGAGA	
     41970	    36	 100.0	    28	....................................	GCAGCAATGGAACTAGCGCAGACGATAC	
     42034	    36	 100.0	    28	....................................	TTCGTCTTGTGCTTTCAGATGCGCTGGC	
     42098	    36	 100.0	    28	....................................	TCATTACGCTAGTTGCGATCACGGTTGG	
     42162	    36	 100.0	    28	....................................	GTCGGTGTCCTCGAAGGCAGCCATCGCG	
     42226	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
        11	    36	 100.0	    28	GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   ACACCATTACTTCATCAAGTACTGCGTCAGTGACCGCGGAAATCGTCTCATGGGAGATGTCCACCCGCATAACAGTGGCCATATGGTGCCTGATATCGCGCACGGTCATCCCACTGGCATACAAGCTCACGATCATGTCATCGACATCCGTTAAACGCCTCGAGCCTTTCGGGACCATGGTGGGAATATACGTCCCAGCTCTATCCTTGGGGACGTCTACGGTAACTGGCCCGTCGTTGGGATCAACAGTCTTTAGGTAGGTGCCGTTGCGATAATTGTAGATCCCAGCAGCAGCTTTAGCTTCGCGATTTCAGCATGAGCAAGCAGCTTTTCCTCAGGTCGCGTCAATCTTGGCCTTATCAGCCGAGTCTCGTCTTACCACAGTAGTCATTCTGACTTATCTCCTTATGCGGAATAGAATCCCAAACACAAACCATCAGGCACCCTCATTCCCAAAAACCCTGATAAACTTCTCCTACGGTTCATCCCCGCTGGTGCGG
# Right flank :  CAGGTAGCCCAAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.20,-3.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.64   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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