Array 1 189538-184109 **** Predicted by CRISPRDetect 2.4 *** >NZ_RIZH01000006.1 Marinomonas rhizomae strain IVIA-Po-145 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 189537 28 100.0 32 ............................ ATTTGCAGTGATAGCCGTTTTAGAAACTTCGC 189477 28 100.0 32 ............................ CACGCCAGACAACAACGGAGCTAAAAAAACCA 189417 28 100.0 32 ............................ GCTAGCAACTGATTTAGCCAATTCTTGAACGG 189357 28 100.0 32 ............................ AATAAGGATCTAATTATACCCGTTGGATATGT 189297 28 100.0 32 ............................ GATCTCATGCACCCAAAACTCTTTGTCACCGT 189237 28 100.0 32 ............................ GCGCACGCCTTGGCCGTGGTTGTTCACTTCCA 189177 28 100.0 32 ............................ ACGAAAGCAATCAACGACGTGAACGCAAATTT 189117 28 100.0 32 ............................ CAACGCCGAAATCCCCAACCTTCAACAGCTTA 189057 28 100.0 32 ............................ GCGAGTTATAACTAACAAATCAGCATCATTTG 188997 28 100.0 32 ............................ TCTTTGTAGGGTATTACGTTTCTATCTTTCAA 188937 28 100.0 32 ............................ CGTTTTCGGGTGAGCTAACGAAGGGCAAGCGC 188877 28 100.0 32 ............................ AACTGAGTTCGGAATTTCTGGATCTGGCGTAA 188817 28 100.0 32 ............................ GCGGGCTTGCCTGCGTCGTCGCAACGGGTTGG 188757 28 100.0 32 ............................ GTTGTCTTTTAAAACGTCTTCAAAATCGCTCA 188697 28 100.0 32 ............................ GGACGCTAGGGGATGAGTTTAATTCAAGTGAA 188637 28 100.0 32 ............................ CGTTTTCGGGTGAGCTAACGAAGGGCAAGCGC 188577 28 100.0 32 ............................ AACTGAGTTCGGAATTTCTGGATCTGGCGTTA 188517 28 100.0 32 ............................ CTCAGTGATTAAGAAGATTTCTCTCACCTGCT 188457 28 100.0 32 ............................ TTTAAAAAATGGTAGGTTTGCTTTATACAGCA 188397 28 100.0 32 ............................ TAAATTGTTGAAGGTTGGAGATTTTGGGATAG 188337 28 100.0 32 ............................ TCTGTCGTAACTGGGGGTTAAGCCATGCGCGC 188277 28 100.0 32 ............................ TAGCTGGACGTTCTTGTAGTGACGAGCAAGTC 188217 28 100.0 32 ............................ TGACTTTGTCGTGGGTATGCCCGTCTTTCTAG 188157 28 100.0 32 ............................ TGTTAACAACCAATTAACACTTACACCCTTCG 188097 28 100.0 32 ............................ TTGTATGGTGTTTAGTCCATAGAGCGCCTCGT 188037 28 100.0 32 ............................ AACATAGCCAGCAACGTGTTTTACATATTTGC 187977 28 100.0 32 ............................ AGATTCTGGCTTTGGCCTCCGTTGATCATTCT 187917 28 100.0 32 ............................ GCGCACTACAAACACTTCATCACGACTAGAAC 187857 28 100.0 32 ............................ ATTCAAACGTGGTGTCATCGTCATCACCATTC 187797 28 100.0 32 ............................ AACATAGCGAGTAACAATTGTCCGTTAATCGT 187737 28 100.0 32 ............................ AACATAGCCAGCAACGTGTTTTACATATTCGC 187677 28 100.0 32 ............................ AGATTCTGGCTTTGGCCTCCGTTGATCATTCT 187617 28 100.0 32 ............................ GCGCACTACAAACACTTCATCACGACTAGAAC 187557 28 100.0 32 ............................ ATTCAAACGTGGTGTCATCGTCATCACCATGC 187497 28 100.0 32 ............................ AGCCTGACGCGTTGGTCTACTGACGGATTGAC 187437 28 100.0 32 ............................ TTGATAAATTCAGCTTGCGTTGTGCCCGACCA 187377 28 100.0 32 ............................ GAGTTTTTATTGGTAGATAACACTTATCAAAA 187317 28 100.0 32 ............................ AATTGCCGCTACATCATTAGCAGTAACACCGC 187257 28 100.0 32 ............................ AATGCGCCATTTTCGGCAATCGCAAATTTCGC 187197 28 100.0 32 ............................ ATTCCGTGACCCTGATTTTCTAACAGCGTGAT 187137 28 100.0 32 ............................ CACAAATAACGATTGGGGTGTTTTTGATAATA 187077 28 100.0 32 ............................ TACTAACCCTGTACATATATTGTAGCTCTGTG 187017 28 100.0 32 ............................ TACACCATCATTCAATCTAACTAACCCCGCAT 186957 28 100.0 32 ............................ TATCGCTCGATTCATGTTGAACAATTTTGACA 186897 28 100.0 32 ............................ AATGAGTTAACGTATCAGCCTGGCATAACCAC 186837 28 100.0 32 ............................ AAAGCGCAAGAAGAAGCCCAAGCGCAAACAGA 186777 28 100.0 32 ............................ AGCGCAAAGGGGACGAAAATTATCAACATACT 186717 28 100.0 32 ............................ TCATAGAACTTACTGACTCGTGACCCTGACTT 186657 28 100.0 32 ............................ CGTCAAAAAAATAGTATTTCACACCCAGATCC 186597 28 100.0 32 ............................ ACATATTGAAAATTCGAACATCAGAATCATAA 186537 28 100.0 32 ............................ AAGGAAGGCTGGCGGTTTTTACGGACTGACTA 186477 28 100.0 32 ............................ TAGTAACACCAAACATTACTGTCGGAGGCTAC 186417 28 100.0 32 ............................ GTGGTGAAACCGTTGTTTATTTGTCCGGTAGC 186357 28 100.0 32 ............................ TCAATATAAAGCCCGCCTTCGCGCTCTTCCAG 186297 28 100.0 32 ............................ GCGTTACGAGTGATCGCATTTAACGCACTCTC 186237 28 100.0 32 ............................ ACGATCATATCCACATATATTGGTCGAGAGAA 186177 28 100.0 32 ............................ TCGAAATTTCGAATCTTATATTGAGATTGAAA 186117 28 100.0 32 ............................ ATTGCAGTGGCAACGGACGGGCAAAACCTAAT 186057 28 100.0 32 ............................ AATGCTGACCGAGTGCAACAAATGGCCATTGC 185997 28 100.0 32 ............................ TTTGCTTACGTTGTTGATTGTGTGGCGTTCAA 185937 28 100.0 32 ............................ GCGGGCTTGCCTGCGTCGTCGCAACGGGTTGG 185877 28 100.0 32 ............................ GCCGAGCCGCCTTTGTTTTGAATGGTGACACT 185817 28 100.0 32 ............................ AAGCGCTTCAATCTATTGAAAGTTTGGTTGGC 185757 28 100.0 32 ............................ AGCGTATAACTGATCGTGCCTACGTTTTCGTT 185697 28 100.0 32 ............................ AACATCAAAACAGACGCAGCGGATAACATCGG 185637 28 100.0 32 ............................ GTTGTCTTTTAAAACGTCTTCAAAATCGCTCA 185577 28 100.0 32 ............................ ATGATGGAAAAATACAAAGGCCATTTCGTAGA 185517 28 100.0 32 ............................ ACTCGACAGCATCGTCTTTTACGGTCTCAACT 185457 28 100.0 32 ............................ TGCTTGATTTGACGTTGTGCCGCCTCCTCCGC 185397 28 100.0 32 ............................ GATTACAATTGAAGACTCAGTGAACGAAGACA 185337 28 100.0 32 ............................ GTTGAGATTGGTGAATTGAATGTAATGGTCTT 185277 28 100.0 32 ............................ GTGTAGCGTTGTATACCCGCCCACCCGAATCG 185217 28 100.0 32 ............................ AGACTAGGATCTAGAGTCTGGCAGACTAGAAA 185157 28 100.0 32 ............................ AGTAAGCTTAGCAAGATCGCTGGGCACTCTAC 185097 28 100.0 32 ............................ TCCCAGCGCTGGCGGGCTTCTTGATCCGCATT 185037 28 100.0 32 ............................ GAAGTCTGCATGGAAAATACAAGAGCGTATCG 184977 28 100.0 33 ............................ CTTTTTCTCTTTCTCCCAGGCCTCAATTTGCTC 184916 28 100.0 32 ............................ TTTTTTTGTCAGAGTAAAAAAAGGTGGTAATC 184856 28 100.0 32 ............................ AAGATCAAGCCGCGCAAGGCCTAGCAGTAGAA 184796 28 100.0 32 ............................ AAATACATCAGGCTGGGTGATGAAATATTGTC 184736 28 100.0 32 ............................ AATACAGGGTGCGTTCACACTCAAAACAACTT 184676 28 100.0 32 ............................ CAGAAAACATGAATTGTGATCCGTTCTTTTTC 184616 28 100.0 32 ............................ TCGCGGCCCGCAAATTCATTAGCCATTTTAGT 184556 28 100.0 32 ............................ TTTTAACAGCTGTGCGTCGCCTTCAAGGTCTA 184496 28 100.0 32 ............................ TACATTCTTCAGATTGATCGCTCTGATTGCTT 184436 28 100.0 32 ............................ GTCAAAAACGTCAGCCCACGCCACGCGATCAC 184376 28 100.0 32 ............................ GCTACTGGATTCATTACGTTACCGTCAGCATC 184316 28 100.0 32 ............................ ATCAAGCGTGGCCGAGCCATACAAATAGTATA 184256 28 100.0 32 ............................ AACGATTACTGGATGCAAAGCGGTGTCGACAG 184196 28 100.0 32 ............................ TGACCGATTCCCGCGCGCTTTCTGTTAAGCGG 184136 28 92.9 0 ........T....T.............. | ========== ====== ====== ====== ============================ ================================= ================== 91 28 99.9 32 CTTCACCGCCGAACAGGCGGCTTAGAAA # Left flank : GGTTAGAAGAACTCGAAGCGTTATCGTGGCGACGTGGTTTAGGGGATTTCACATCAGTCACCAAGGTTACTCAAGTGCCCACTACCAATGAATTTTGCCTAGTGAAGCGAGTTCACGTTCAGAGCAACGCTGACCGATTGCGTCGCCGAGCAATGAAACGCCATGACCTCACTTACGAAGAAGCGGTGGTACGCATTCCAAAAGACGTTGAAAAGCAAACAGATCTGCCTTTTGTCAGAATCAAAAGCAAATCAACAGGAGATCAACAGTTTCCATTGTTTATTCAGCAAACCATAACGACATCAAAAGGCGAAGTGGCGAACTTCTCTAAATACGGATTAAGCGCCACCAGCACCTTGCCTTGGTTTTAACCCTTTTTTTCGACCCAATGCCAAGCCCTTATAAATAGGGGCTTGGCATTTCTTGTTTAAAAAAGAGTGTTTTTACTAAAAAGATACAAAGCTCTTTAACAATCAGGTACTTAATGCTAATTTCGTCTA # Right flank : CTTAATTGCTATAAATATCTAGCGCTACAGCTCTTCACTGATGCGGTAGGTAGAAACTGTATGTATCATGGCTGGAGTGTAATTTAATATGGAGGGGGCGAAGAGGTTCCCCTTGCCTTAGTGTGTGGGTAAAAGTCTGTAGTTTAAGGTGAGTGCTGTGATCGGTCTTTACTAATGTGTTGTTTTATCTCCATTGGCTTGCTTGATCCTTTTTGTTATTGGAAGGTGATATGACGGTTTTTTACAGGGTCTGCAGGTAGGTAAATCCGTATTACTTTGTTGATCGTTTTGTGAAATTCATTAGTTTTTAAAGTGAGGTATTTTACTTCTCTATTATTCTAATTTTTAAAATGAAATTTTAGTGAGTGTGCAGTGAGAAAAGGTATAAATAGAGTATTGCCATGCTAGAGCAAGAAGCGAAAAAGAAGGTAGATAGAATAAATATTTTTAAACTGGTTGTTTCTCAGTTTTTAATCAACTTAGGGGATGTTCTGATTAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //