Array 1 456710-457003 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPF01000019.1 Coprococcus eutactus strain MCC414 NODE_23_length_495799_cov_71.394073, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 456710 32 100.0 33 ................................ ATACAAATTAACAGCTTATGAGTATGCTACACA 456775 32 100.0 34 ................................ AGCAGTTATCAGCAAGTTAGACGGCATTTCTAAC 456841 32 100.0 33 ................................ AATTGTAATAAATGTTATGTCTGTAAAAACATC 456906 32 96.9 34 ........G....................... TATGTCATTTTCAAAGCTTTCTGCCGTTTCTGTC 456972 32 81.2 0 ........G.......A...GGT..A...... | ========== ====== ====== ====== ================================ ================================== ================== 5 32 95.6 34 GTTGCAATAAACGTATGTGCATGAGGTGTGAG # Left flank : GGAGAATCTAAAAGGGATTACAGACAAATCTGATCGATTCCTGAAAAATTGGTCATACTATGATCTTCAGCAAAAGATAGAATATAAGGCAAAAGAAAAGGGTATAAATGTTGTATTTATAAATCCCAAATATACAAGTCAGAGGTGTAGCAGATGTGGTTATATAGATAGTGCAAATCGTCCTAAGCTACCCAATCAGTCAAAATTTTTATGTATAAAATGTGGTTTTACTGAAAATGCAGATTACAACGCAAGCCAGAATATAGCACTTTACAATATAGAAAAATTGATAGATGCTGAGGCATAAATTAAATTATGGTGCGAATAGTAAGTAAACATTGAGTGCTATAAAACAAATGCATAAAAACAAGGGCGGCTCAACGTCCTAGAATCGAGAAAGTATGCGTAAGACTTATTTATTGAGCGGTAGATACTCTCGGTAAGGTATAAATTCCACAATGAAAATCCTGTGGACACCGTATAATATGTGCATGTTTGCC # Right flank : GTTTTGCTGGAAGATAAAATATCAGTTGAGGTGGATGAGAATATTTATAATTCCTAAAATAATAAACAAATAATTGCGGTTGTAAAAGTAGTGTGGTATAAATAAACTAAATATGAAATTTCCCACAACGGGACTTAGAATGATTATAAAAACGAAAAAGCTTGCATTAATATGCAGGCTTTTTCACGTTATATAGAAAATTAATTTTGTAATATCCGGTAAGATGGTGTTACATTGTTTTTAATTGGCAAACCCAATCTACGGTATTACTATAACGATGTGTATTTGATATTATAGACAGTAAAGCATTTTAAAGAATGCAAAAGGGGAGAGTTAGTATGAATAGAGGAAACCGGATATGCTTGGATTCAAAAGGTTTTTCGTTGGTTGAACTGATAATCGTTATAGCGGTTATGGTGATATTGGCAGGGGCACTTGCGCCGGCACTGATAAAGTATATTGAGAAGAGCAGAAAATCAAAGGATATCTAAAATGCGACC # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAACGTATGTGCATGAGGTGTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 1-547 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPF01000028.1 Coprococcus eutactus strain MCC414 NODE_34_length_467_cov_33.349037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1 36 100.0 31 .................................... ACACACCTCCCTTAGCTACTGTATTAACTAT 68 36 100.0 28 .................................... TATACTCGTTTCATATATATTTAACTCC 132 36 100.0 28 .................................... TAAAATATATTCTATCACATATCTATTA 196 36 100.0 29 .................................... ACGCGCAGTGCTTTCAACTCATCAAAGAG 261 36 100.0 27 .................................... TAAATCACTCATAACACCTGCATATAC 324 36 100.0 27 .................................... ACATTGACTGATATTGTGTTGAGTATT 387 36 100.0 27 .................................... AAAGTTAATCCAAACCTTGATGACAAG 450 36 100.0 26 .................................... ACTCCTTATCTCTTGCTCAACTCAGC 512 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 100.0 28 GTTAAGTAACCTATAGTAATTTCTACTGTTGTAGAT # Left flank : | # Right flank : | # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAGTAACCTATAGTAATTTCTACTGTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 276-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPF01000024.1 Coprococcus eutactus strain MCC414 NODE_29_length_17775_cov_52.171364, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 275 24 100.0 38 ........................ GACTGTTTCACCCTTCTTTGGATCAAATCTACAACAGT 213 24 100.0 38 ........................ GATATGGAATATGGACAGGACAAATTATCTACAACAGT 151 24 100.0 40 ........................ TCTCTCGCTGTAAGCGTGTATACTCTATATCTACAACAGT 87 24 100.0 38 ........................ TCCGCCGGTGATTACGTCACTGATCTATCTACAACAGT T [76] 24 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================== ================== 5 24 100.0 39 AGAAATTACTATAGGTTACTTAAC # Left flank : GAACTGGCTATAATCACCAGTATACCTGCAAGCCAAATTATCCATCCAAGTAAGCTAATTACAATAGAGACAATACAACCAAGTAATTCTATATATATTTTCCCCTGTGTTATTATTTTTTTATTACTCAAGAATGGCAGAAAAACTATTCTTAACGCGGTTCTTACTTGTCTAGACTTTTCTTTTTCGTCTGTATCTTTAATGATATTATATGAATTTGCTTTACTTTCTTCATCATATTTTTTCAAAGCCAAATATAGTGCTTCAGCGTAAAGTTCAATGTCTTTTTCCCTATCCTTCTTGACATCACTTTGCTTGTTGCCATACTTTCTATTTTTTCTTTTGCCCATCGCTTCCCCTATATAAATTTATTTACATTTAAGATCAATTACTTCTCCTTGTTATGCAGCAATATTATTCATTAACGCTTTATTATAACTTGTGAAATCTATTGTTTTATTCCCCAACGATTCCACTATATATCCATATCTACTAATAGT # Right flank : C # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAAATTACTATAGGTTACTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //