Array 1 1136-103 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPGN01000078.1 Enterocloster clostridioformis strain 1001175st1_C5 NODE_78_length_21714_cov_32.6607, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1135 32 100.0 34 ................................ ACTACCTCAATGAATCTCGGATCCAACGTGATAT 1069 32 100.0 35 ................................ TATCCCAGTCTATGTCTCCATGGTGATGCGCCACC 1002 32 100.0 33 ................................ GCGTGGATTGGAGGCTACTATAACCGTGAGATG 937 32 100.0 33 ................................ TGCAAAGGATGGGAAAATGCAAGAGGCTGCCGG 872 32 100.0 33 ................................ TCCGGAAGGAGGGCTGATATGCATGTCATCCAA 807 32 100.0 37 ................................ TAAAATTGACTATCACAATCAGGAAACAGAACGGTAT 738 32 100.0 36 ................................ TAATACCATGTTGAACTGCGGGAACAGCTGTTTACA 670 32 100.0 35 ................................ AATATGAAAATGGAGCCAGGGACAGAGGTGGATAT 603 32 100.0 36 ................................ ATGATATTGACTTGACCCGGTCCCATGCTGTAATCA 535 32 100.0 34 ................................ CCGTATATGCTCACTCACTGTCATTTTTTTCCCC 469 32 100.0 36 ................................ GTCGTTATGATTGAAATACCATGTGGGCGAAACACT 401 32 100.0 34 ................................ TATATGGAGATAGACCCAGACCTTGTTGAGCGGA 335 32 100.0 35 ................................ CTGAGTGATGTGGTTGATTCCATCAAACAGTTGAT 268 32 100.0 35 ................................ TGTGATGAGCAGATGAGCAAGGCCATTGTGGGTCA 201 32 100.0 35 ................................ ATTAAAATATCCTGTAAAACTATTAAATCGTCGTC 134 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 100.0 35 GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Left flank : GCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGGGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGGTGGGATATGATTTGTTTGTGGAAATGTGATGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TTCCAATCCTTACCACCTTCCAAAAGGAGAGTATGAAAAAAAGTCTGTAAATTGAGATCTTCTATGATAAGTTAATGAGAAAGGTAGGTGGATGTCGTGACCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 17486-17258 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPGN01000089.1 Enterocloster clostridioformis strain 1001175st1_C5 NODE_89_length_17581_cov_34.5663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 17485 32 100.0 33 ................................ TTTTTCATTGGCCCTCCTTAATTGCACGGTACT 17420 32 100.0 33 ................................ GACATGAGTGTAAATAATTTTATCAATATCATT 17355 32 100.0 34 ................................ TCCGGGGTAGTCTCATAGCCGTTCACATAATAGC 17289 32 68.8 0 ......G.T......TC....CAAG..A...A | ========== ====== ====== ====== ================================ ================================== ================== 4 32 92.2 34 GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Left flank : GCCTCCTTATGATAATAGATTTTATCATAGAAGACCTAATGCTTAATAGCTATTTACAGAAAAACTTTCATACTCTCTCCAAAAGTCCCCGGCAG # Right flank : TCCGCCAATTACAGAATTACATCCAGTTGCCCTCTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCATGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCCCCGCCGATTCCGATGGGTTTGCCGTCTTCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCCGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATTTCACCTCCATGGAAGTCCCAGATATTTCCTTCTGAAATCG # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 62285-59561 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPGN01000012.1 Enterocloster clostridioformis strain 1001175st1_C5 NODE_12_length_103951_cov_32.9429, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 62284 33 100.0 34 ................................. CAGGTTACAACCGTCAGCCCGGCCAGAGGCATTG 62217 33 100.0 37 ................................. AGTGGATATTACGGACAAAGAGGGGCAGAGCGTTATA 62147 33 100.0 35 ................................. TGATTTCAACAAGATATATAACTATAAGAATCGGG 62079 33 100.0 33 ................................. ATCCCTAGCAGTTTATTTGATAATGCTGACTTG 62013 33 100.0 34 ................................. GGATAAGACCATGCGCACAGAGGGAAGGCTCCAG 61946 33 100.0 34 ................................. TCACAAACTTGCAGAGGTACAGTCACATTCTCAG 61879 33 100.0 37 ................................. AGTCGGTTGGTATGCAGTGGATTATACGGGCTGCATT 61809 33 100.0 34 ................................. ACGCTGCTGCTGGGAGAAAACGCATATGCTACCA 61742 33 100.0 34 ................................. AGCAGAGGGCAAACTTACAGAGACAGAAGCAGAG 61675 33 100.0 34 ................................. TTATCCCTATCATCATCTCTCATTGCATCCTGGA 61608 33 100.0 35 ................................. CTTTTACGGCAAAGACTCTTTTATGCACCCTTGCC 61540 33 100.0 34 ................................. CACCTGCGCCCCGACTTGGAGGGTGTGTCCATTG 61473 33 100.0 34 ................................. ATTAACGCGGCCCTGACTGCGTCCGCATTGACGC 61406 33 100.0 34 ................................. CCGGAAGATATTACCCATCCGGCCGACCAGCTAG 61339 33 100.0 34 ................................. ATAATCTCCATCTGGATTTACGCGGTCAATAGAT 61272 33 100.0 34 ................................. GTGTTAAACGGAACAGAATATGAAGTATGCGACA 61205 33 100.0 33 ................................. CATAGTCTTATCAATTTCCTCGATGTACTTCTC 61139 33 100.0 36 ................................. TGGATGATATTACACCATTTTTGAATAAGCGTGTAA 61070 33 100.0 35 ................................. CAAAATCCATCACAGTCAAGGGAGTACATATTCAG 61002 33 100.0 34 ................................. CTCCAAGTAACCACTTTTCATGGTTACAGTAACC 60935 33 100.0 34 ................................. TCATAAGGCAGCCGCCGTCCTCAATAAGGTCCTC 60868 33 100.0 33 ................................. TAAGGATGTACAAAAGGATTTACCAGCTGCAGA 60802 33 100.0 33 ................................. AAAAGGAATTAGAAAAATTCAAGGTTGAGTTAG 60736 33 100.0 34 ................................. TCCATCATACCAGCTTAATACCGGTTCATCTCCC 60669 33 100.0 34 ................................. CTTCCTCATCCAGGACAATAATCCCCTTCCCATT 60602 33 100.0 34 ................................. ATCTGCCGCGCATCCGTCACAAACCCCTCATTCG 60535 33 100.0 34 ................................. CCCGCAATGCGCATATAGTTGGAGTACAACAGCC 60468 33 100.0 36 ................................. CATCTGGAAAAATACATGAAGCCGTAACGCCTAATG 60399 33 100.0 34 ................................. TTATCACATCAATCTGTGCCTGTAAATCTGCTAT 60332 33 100.0 33 ................................. CACCCACTTTTTTGCTATGTAACCTGTAATCAA 60266 33 100.0 37 ................................. CATATCTATGCCAATCGTTCGGATTTCCTCCGGTAAT 60196 33 100.0 36 ................................. CCCGCAATGCGCATATAGTTGGAGTACAACAGCCCG 60127 33 100.0 33 ................................. TGTATTTCATCGACCGCCTGCTCGTATGAGCTG 60061 33 100.0 34 ................................. TCCAGAACGTGCTTTTAATGGCATAATCAAGGGC 59994 33 100.0 35 ................................. TGTATAGGCTGCAGCTGCAACAGATGTTACCTGGG 59926 33 100.0 35 ................................. CCACCATTTTTTTACGAACAGCACATCCGCTGAAA 59858 33 100.0 33 ................................. TTCAAAACCCGCATATGCAGTTGCTATCTGTTT 59792 33 100.0 33 ................................. CCTCCATATTGGCTTACTAATACCTTTTTAGTC 59726 33 100.0 33 ................................. ATATGACCTAATAGACACAGAGGAAAATCGAAA 59660 33 97.0 34 .............G................... TTCTGGAAATTCTTAAAATCACGGTTATCCCAAT 59593 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 41 33 99.9 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTACTGCGCATTTACGATGTCAATGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGCGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : ATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCTGATTTCGTGATAGGCTTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTCACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGTAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGTAATTACCTAATGCAGAACCATTTATGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //