Array 1 416300-414566 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOU01000001.1 Lapidilactobacillus wuchangensis strain 17-4 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 416299 32 100.0 34 ................................ TAACAACTTAGGTAGCGTAAAAGTTAGCGTCGGT 416233 32 100.0 33 ................................ AAGTTTGCTAGTCCAGGACGAACGCTTCTCAGG 416168 32 100.0 32 ................................ AAAACGGTGTTAGACTATGGCACGCTAACGAT 416104 32 100.0 33 ................................ AGATGATACGCTCGGAATTGTTATGGGTGATAC 416039 32 100.0 33 ................................ AAAACAAAAGCTTAATGCAATTCAGGTTTTGCT 415974 32 100.0 33 ................................ ATTACCGGGAAACATACTATTGTTTTTACCCTT 415909 32 100.0 32 ................................ AGCGGTTGGTTGATTATGTTACTAGCGCCAGT 415845 32 100.0 34 ................................ AATCAACCGTTATATTTGCCCTATGAAGAGGGTC 415779 32 100.0 34 ................................ ATAACAAAGTGTTGTGTATATGGAACTGTTTGAA 415713 32 100.0 33 ................................ ATAATTCGGGTGATTTTGTTCATATGCAATTTT 415648 32 100.0 34 ................................ TTAAATGGCATGACTTAGCCCCCCGTATTGTGAA 415582 32 100.0 35 ................................ ATCAAACGAATTTTTGTAGGCTGTGTTGAGCGAGT 415515 32 100.0 34 ................................ GCATACGGCAAGGCAAAAGACGGCAATGCTGCTA 415449 32 100.0 32 ................................ CCAGCAAGCAGTTATTCGCGGTGATGATCAAT 415385 32 100.0 32 ................................ TAACCAACAGACCCTTCCAATTAATTTTCAGC 415321 32 100.0 32 ................................ CTCGGCCTGGTAAAAGAACATTGATGGCCGAT 415257 32 100.0 34 ................................ TGCGCCTAGAGGAGAGCTTGACGAAGGTTAGCGC 415191 32 100.0 37 ................................ ATCAGGCCCACTTGGGTTGTTGGAGAAAATGTTGCTA 415122 32 100.0 34 ................................ TGTGCGGCTTTCTTTTCGGGAATGCCTGCTTCAA 415056 32 100.0 35 ................................ TTGCCCTTGCCAAATCCAAATGTAAAGTTGCCGCC 414989 32 96.9 33 ......T......................... AGCACTCTGATGGTCACGTAACTGTTAATAAGA 414924 32 100.0 36 ................................ AACGGCTGACATGATCAAGATGTTAGACAGCGAAGC 414856 32 100.0 32 ................................ TTATCATTGCGATAGGCAAAGTCGTTCTCGTC 414792 32 96.9 33 A............................... TTTGAGCCGCGCATAGCTTTGCGAATCATTTCC 414727 32 100.0 32 ................................ AGTTCACCGGACAACCTCACCCAACTAAAAAC 414663 32 96.9 34 .............C.................. AAACTCGGCGTCGTGGTTTTAAAACTCAACGTGA 414597 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ===================================== ================== 27 32 99.5 34 GTCGCTCCTTATATAGGAGCGTGAATTGAAAT # Left flank : TTTACGAGGGGATTTAGACCAATATCCGCCGTTTTTATGGAAGTGAATTTATGCTAATTGTTGTTGCGTATGATATTTCTCTAGTAGATAAAAAAGGTCAAAAACGTTTACGTAAAGTTGCCAAGAAGTGTGAGCAATATGGACAAAGGGTTCAGAATTCAGTTTTTGAATGTTATTTAAGTTATGATCAGTTTACAAAAATGAAAATTGAGCTTTTGGCATTGATTAATGATCAAGAGGACAGCCTAAAGTTCTATCGATTGGGGAAAAACTACCAAAATAAAATTGAGACTTTTGGAACCAAAGAGGTTTTCGACTTGCATAATGACACGTTAGTTTTCTAGTGCGAGGTTGATACAAACAGAAAAAGCCTGGCGGGTTCGCACCAGAAAAAACCTATTTTTCATAACTTTTTTACTTGTGATTTTATTTTTCAAATAATATATTCAGAATAATTCATTGTTATTCGCATTTTTTAGTGGTTTTTGCATAAAATCACG # Right flank : ATAAAATCCACATGACTAAGCCAGTTCCTAGATTAGCGTTTCTTCGTGTACAAAAACGTGGCTGCAATGCAAATGCACCAATTGGCGTACTGTACAAAATTTATAGAATCGTCTGCTGCGGAATGAACACGATCAACAGATTATCTTGACTAGCTACGAGAGTCTCACCTAAAAGTAATTTTAAAGATTCTCAATTGGACTAATTCGACCATGATTTTTCAAGAATTTAGTTTCTTAATCATTTCAATATACGATTTATCTCAGTGTCGGTACTGCTTGTCGGCTTTCTATGTTAAAATCAAAGTTATGTAGTTAATTGAGGAGTGTGGAATCATGTCTGACAAAATTGCGCTTATTTATGCCAGTAAATCTGGTCGTAACGAGAAAGTAGCCCAATACCTTAATCAACAATTCGCAACGCTTAAGCAGCCAATTGAGTTAGCCGAAATGGCCAGTTTTCCGATTGAACATTTGGCCGATTTTGCTGGGGTAGTGCTGGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTATATAGGAGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //