Array 1 47261-44955 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053834.1 Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 47260 30 100.0 35 .............................. ATAGGTATCATTTTACGATAAACCCAAGCGGGAAT 47195 30 100.0 35 .............................. AGTTTTAATCTAAGTGTTTTTCTTAATTCTCGTTC 47130 30 100.0 35 .............................. CGATTTAAAGTTAAGTTTATATCAACCGTTGATTT 47065 30 100.0 34 .............................. TTTACCAATAGGTAAATTATTAAACGGTTGTTTT 47001 30 100.0 37 .............................. TCATTATACTTATATTTACAATTATCAATTTCTTTTT 46934 30 100.0 34 .............................. TCATATATTGTTTTTAAATCTATTTTTATATTTG 46870 30 100.0 36 .............................. TTTTTTCGTCTACCATGTAAAGCAAAAATGAATATA 46804 30 100.0 35 .............................. ATATTCCCAAGCTGATATTAGGAGTGACTTAAATT 46739 30 100.0 35 .............................. TAGATATATACTCTTCATTCAAATTATCAAGCTGA 46674 30 100.0 35 .............................. ACAGCTGTTCTTGAAGCTTTTGAAGCGTCTGGAAT 46609 30 100.0 35 .............................. TTTAATGCTTTTGTATCTGTTAATATTTTATTAGT 46544 30 100.0 35 .............................. GCTGGAGTGTCGTATCTTGTAGTAGTAGATGGACT 46479 30 100.0 35 .............................. GCAGGTTACAAGTGGTGGAAAAAACAAGTTCCTGA 46414 30 100.0 35 .............................. TCTAAAAGTTCAACTTCTAGTAGCTGTAATCTAGC 46349 30 100.0 34 .............................. GCAGAAGAGATGATATTGATTTGGGGGATAAAAT 46285 30 100.0 36 .............................. AAGAGAAAGAAGTTACAAGTGGGTATATTCCATTAG 46219 30 100.0 35 .............................. AACCTAACTTTACAAGAAAAATTACTTTGTGAAAT 46154 30 100.0 33 .............................. CACAACAAGATAATCAAGTCGATGGACTCAATG 46091 30 100.0 36 .............................. GGGCTAAAATTTTATGCAAGTAGGGATGTAAATGTA 46025 30 100.0 36 .............................. AAAAAATATATTAGCAGTTTTAAAAAATAAAGATAG 45959 30 100.0 34 .............................. AAAGTAAACGCAGAATATTTTGCAGAAGATAGAA 45895 30 100.0 35 .............................. TTATTAAAATCTTCTTTAAGATTTAGCTTATCAAA 45830 30 100.0 34 .............................. TTTAAAGCTTCAAATTCTTCGGGTGTTAAGCTTT 45766 30 100.0 38 .............................. ACTGCAATAAAACCAAAATTTGCTAAGAAAATTTTTAT 45698 30 100.0 34 .............................. GGAGCTGTAGCAGTTGCTGGTTTAGCAAGTTCAA 45634 30 100.0 35 .............................. TGTACTAATCTTCCTGTTTTTACTAAATCTAAAAA 45569 30 100.0 35 .............................. TGCATTTAGCTGTTTAAAATTAGAAGATTCTATTT 45504 30 100.0 34 .............................. CTTTTAGAGCTGAATATGGGAATAGGTTATATAG 45440 30 100.0 36 .............................. TCAAATTTTTATTTCTGAATACAATGCACCAGATGA 45374 30 100.0 36 .............................. TCAAGATATAAATGTCTATCTCTTTTTTTTATTTTT 45308 30 100.0 33 .............................. GGGCTATGGGTCATTTATTTGTTCAATTAAAAC 45245 30 100.0 35 .............................. AGAGGGTATAAAAACAGCTATTGCAACACTTGGAA 45180 30 96.7 36 ....................A......... GTTCTTGAATATTTTAGAAAATCAAAAGCAGATAAA 45114 30 100.0 34 .............................. CAAAAACAGAAAAAAACAAACTAAATAGCAATAG 45050 30 100.0 36 .............................. ATGAATGAAGAGTTAAAAAAAGAACTAGAGAGTTTA 44984 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 36 30 99.9 35 TTGAACCTATTACATATAATGTATTGAAAC # Left flank : TTTTACTTACATCGTTTGCTATTGGTTTTAAAATTTCTCTTATGTAAGCATATAAAGCATATTGACTTCCTCTATATCCTTTTGATTTTATATCTTTTAAAATTCTACTAGCTTTTAAATTTTTCTTTAAAAATGACTCTTTGATAAAATCAATAAATGGTTCAACTGCTTCATTTATTTTTTTCTCACCTCTGTTATATAAAGGTAATTCATCATTTAATAATGCTTTTTTTACAGTATTTCTACTAATACCTAACATTAAAGCAATTGTTCTAGTTCCTAAGTTTGGATCTTTCTTTTTTAGATTACGAATAGTTACCCAATCCTCCATACTAATCATCTCCTTTTACCTTTCTTCATAATTATTATTTTTATGAGAAAAGAGTATGTTTTTTTAGTTTACAGGTGGGTCAAAAGTTTTCAAAATAGTGGGTCAATTTTCAGTCAAAAAATTCAGTATTGAAACTAAATAAAACAATTGTCTATATTTTTAACTGTTT # Right flank : TTTAATAGATGAAGTTCCCGAATTTAGGTAGTGTGAAAATAACTGTGTAAATTCAAAAATATAAATTTATTAGATAGAATAAAAGATCTATCTAATAAATTTTTTGTTCAAGGATTTACAAATGAATATATTAAATAAAGAAGAATTAGAAAGACAAATACAAGAAGGTAAAGAAATATCATTAGATGGTATTTTAGAAAAATTTAAAAACCTTCTTAGAGAATCTATCCAAACAGCAAGTGAAGTTGAAATGACTTCACATCTTGGCTATGATAAGCATCAAGAATCTTCTAATCCAAATTATCGTAATGGAACAAATAAAAAAATATTGAAATCTAAATATGGTGAAGTTGATGTTTCAATACCAAGAGATAGAGATGGAACATTTGAACCACAATTAGTTAAAAAAAGAGAAAGACTTTTAAAAGATAGTGAAGATTTAATTCTTTCACTTTACACTAAAGGAATGAGTGTAAGAGATATACAAAATCATTTCAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACCTATTACATATAATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 56856-49835 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053834.1 Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 56855 30 100.0 35 .............................. GCTAATGGTAACCGTTACAATAAACTTAAATTAAA 56790 30 100.0 35 .............................. CCAGTTGCAACTCTTACATTTAATGGTTTATCAGC 56725 30 100.0 36 .............................. AGAAATGAAAATCAAATAGCTACTAATAAAAAATTA 56659 30 100.0 35 .............................. TAGTATCACATGATAATATTTTAACTGGTTCAGCA 56594 30 100.0 37 .............................. TGTAAGACAATCTTTAATTAACTTTGAAAACAATTTA 56527 30 100.0 35 .............................. AGAGTTATTAAATGCTACTCATAATTTTATCTCTA 56462 30 100.0 36 .............................. ACTGATTTAGAGAATAGAAAAAAAAGATTAATTCTA 56396 30 100.0 36 .............................. TTATTTTTATATTCGAAATATTTTTGATTTAAAATT 56330 30 100.0 34 .............................. AAGACATCCTTAAAAACATGGATGAAACAACTGT 56266 30 100.0 34 .............................. AGCAATAAAGTTGAAATTACAGGAAATACAAAAT 56202 30 100.0 36 .............................. TTTACTTCCTTTATAATTAGTATTGTTTACAACTTT 56136 30 100.0 34 .............................. TCATAAAGGTTGTTGTTTAGGAAAAATGCTAAAG 56072 30 100.0 36 .............................. GTACTTAAAAGATGAATATAAAGGTGATGTAGCTGG 56006 30 100.0 36 .............................. ATGCATAGTAATTCTTTATTAAGTGATTTAGAGCTT 55940 30 100.0 34 .............................. AAATAAAGATTTATTAACAAAAGAAAATTATTTT 55876 30 100.0 37 .............................. ATAGGTAAGTCAGCAGAATATGGAGCCTCAAAAGGTT 55809 30 100.0 35 .............................. TAGAATGAAAACAATGTCTAAAACTAAAACAATTT 55744 30 100.0 35 .............................. GTTGTTTTAACTGATGAATGACCTAATACATCTCT 55679 30 100.0 35 .............................. AGCACGTAGTAGATTGAATCAATTTGAATTTATTA 55614 30 100.0 34 .............................. GCACTTAAAGCTGGATTATGTTCAATAAGTCTAT 55550 30 100.0 34 .............................. CAAAAACCAAAATCTAAAATCTCATTCCCAAAGT 55486 30 100.0 34 .............................. ATAGAATATGATTGTCTCTTTTCATTTGTAACTT 55422 30 100.0 36 .............................. TTGTTAAACTCGTTTTTAATATCTGTTTGAATTTCT 55356 30 100.0 36 .............................. AAACAAGAACGAAGATGGATTAACTTTTTATGGAAT 55290 30 100.0 35 .............................. CAACTTAATGTTAAAGAAGATGAAGCTAAGAAAAT 55225 30 100.0 35 .............................. ATGGATAAAAGAAAAAATAAGACTGTAAAAGTTAT 55160 30 100.0 34 .............................. ACAAGCCATATAGCATATCAACTTAAGAAACTAT 55096 30 100.0 36 .............................. AGGCTCTACAACTCCACCAAATGAAGATAATAATAC 55030 30 100.0 36 .............................. ACAATTATTAAGACTGGAGAACAACGTTGTAGGACA 54964 30 100.0 36 .............................. TTTTTTCGGGGTGTTTTTTAAATAGTTTTTGTTTTT 54898 30 100.0 34 .............................. CTATTTAAGCATTTTTGCCCAAAAGTGTGATTTT 54834 30 100.0 37 .............................. GAGGAACTATGAGTTTGTTAATAGTTTCAAAAAGATT 54767 30 100.0 34 .............................. GTTTGACAAACTTCCTTTTGAAGATATTAAGAGA 54703 30 100.0 36 .............................. CTAATAGCTACAGATTTTGGAGGTAACTATACAGGG 54637 30 100.0 35 .............................. CAAGGTAGGGCGGATACTTTTTATTTACAAGCTGA 54572 30 100.0 36 .............................. CTATGAAGAGGTGTTTGATTATGGAACTGTTTTACC 54506 30 100.0 35 .............................. ATTCCATAAGTTCTTTTTATTTTTTTTGTATTTTC 54441 30 100.0 35 .............................. AATGAAAACAAAGTGTTATCAAATGAAAACAAAGT 54376 30 100.0 34 .............................. AGAAGAGATAAAAGCTAATAATGAAAAACCTATT 54312 30 100.0 34 .............................. CTAGATGCAAAAGGCAATTCACTATAATCATCTT 54248 30 100.0 36 .............................. TTTGGATGAACATTATAAATATCATTTTTAGCAAAT 54182 30 100.0 35 .............................. GCCTTTGCTAATTCTCGGTGCATCCATGCGACTAT 54117 30 100.0 35 .............................. TAAGTTTTTGTATTTAAAACTGTTGGAGTTGGTAA 54052 30 100.0 34 .............................. TTATTTGTTCTTCTTTTATAAAATCATTATCTAA 53988 30 100.0 35 .............................. GAGGTTAATCATAGAGTATATAGTTTAAATGATTA 53923 30 100.0 37 .............................. GGATTACCTTACATATTCTTTAAAGATTTAGCAAATG 53856 30 100.0 36 .............................. CTATTTGAAATAGAAATAGGTGAGAAAGTTAAACCA 53790 30 100.0 35 .............................. TAATCTATTGTATTTCCTGGTGTAGCTGTAATCCA 53725 30 100.0 35 .............................. GCTTCAAGAAAAAAGCTATCCATTCGCCCCATTTG 53660 30 100.0 36 .............................. AAAGAACTAACAAAAATACTAATTGAAGCAGATAAA 53594 30 100.0 34 .............................. ATATTTAGCACTAGGTCGTTTGGGTGAGGTAAAA 53530 30 100.0 34 .............................. ATTTTTAGGGGCTTAATTATGATACCTGCTTTAG 53466 30 100.0 35 .............................. AAAATTTCATTCTGATTTTAAGATATATGAAAATC 53401 30 100.0 35 .............................. TGAACAAATAACACAAGTAAAAATATTAAAAAATG 53336 30 100.0 35 .............................. TTTAATCTATTTTCTTCTAGTGTGAATGGGTCTAT 53271 30 100.0 36 .............................. TGCAAAATTCAAGACTTTTAAAAAGCACGAAATAAA 53205 30 100.0 35 .............................. TTATGGAAGAATCAATCCAAATGGAAATGAAGATT 53140 30 100.0 35 .............................. AGTAAGCTAAAATACTCATCACCGTCCAATACTCC 53075 30 100.0 34 .............................. TCAACTTCCTCATCACTTGAGAATTCTGCAATAA 53011 30 100.0 37 .............................. TTGAAAGGTTGTAAAAACTACCATAAAATCAATACTT 52944 30 100.0 36 .............................. ACTTATTGATGATGTAGTTTTTGTATGTTCTAACAA 52878 30 100.0 36 .............................. TTAATTATAAAAACTATATTTTCATTTCTTAACTCT 52812 30 100.0 34 .............................. TCTGTAGCTTTTTCCATATATAAAGAATGTAAAA 52748 30 100.0 36 .............................. ATAAAAGTTAATGGTTTAAATGGAGTTGAGTATCCT 52682 30 100.0 36 .............................. AATCCTCTTTTAAAGGTAACATTTCTAATAATTCAG 52616 30 100.0 36 .............................. ACTTGAAAACAGATTTTATCATCTGCTAATAAAACA 52550 30 100.0 36 .............................. AATCACAATTAAAAGTGCAACAACTGGAGCATCTTC 52484 30 100.0 35 .............................. AGAGAAGTTAAAATCAGCAGGTGGGGTTGAGTTTG 52419 30 100.0 35 .............................. AAAATACCTAAATTTATTGTTTTATTAACAACATT 52354 30 100.0 37 .............................. TTGATAATTCATAAGCGACTTTTCCATAAATTTTTTC 52287 30 100.0 35 .............................. TCATAAACAGAGCAATAAGAAACATTGTTTATTTT 52222 30 100.0 36 .............................. CCATTTTTTAAATATTCAATAGTTTTTTTAAATCCT 52156 30 100.0 36 .............................. ACTAAATTAAGAGTCATAGGGATTTCCCCATACTCC 52090 30 100.0 35 .............................. TTCAATATTGAGAATGTTGGAACAGTACTAAAGAA 52025 30 100.0 35 .............................. AAGTCTATGGACATTTATAAATAATCACACTCACA 51960 30 100.0 36 .............................. CAAACAAATGTTTTTCTAGTAGTTCCAAGTGGTGTG 51894 30 100.0 35 .............................. ACAGCTTGAATTGAAATGGTATTTGAAGCCCATGA 51829 30 100.0 37 .............................. TAAGTAAAGGCTTCACCTTTTTCACCTTTTGCACCAG 51762 30 100.0 35 .............................. GAACTTGAAAATAGAATGTCATACAAAGAACTTTT 51697 30 100.0 35 .............................. AACAAAAATTAAAATTTAATCATAGAATTATAGAT 51632 30 100.0 35 .............................. TATCACCACACAAATGGGGCGAATGGATAGCTTTT 51567 30 100.0 36 .............................. TCTGTTGCGGTGTCTGTACCAAATGCAAATCTATAA 51501 30 100.0 37 .............................. CTAAGGGAATAGTTGTAATTTAACTTTCTATTAGAAG 51434 30 100.0 35 .............................. TTGATTAATTTTTCTAATAAAGTTATTTTTTCTTT 51369 30 100.0 37 .............................. AAAGTAACTAAATGTGCTCCAGCTATTAAAGTTTGTT 51302 30 100.0 35 .............................. TTTGGTTTTAAATTAACTGACATTTTAAATCCTTA 51237 30 100.0 36 .............................. TTAAACTTTGTAGTGACATATTAATCCTTTAAATCA 51171 30 100.0 35 .............................. TTTAATGCTAGATTTTCCTCTAAAATTTTAAAAGA 51106 30 100.0 36 .............................. TTTGCAAACAATATTACACCTATTGAATTAGTTTTA 51040 30 100.0 37 .............................. ATGCAAGGACTAGGAGCGTCCGAACAAATAAGCATCT 50973 30 100.0 36 .............................. TTATAAAGTGAATAAAGGGATTCATTATCTGTAACT 50907 30 100.0 34 .............................. ACAGTAGGAGCATATTGCTGATTTAACTTATTAG 50843 30 100.0 36 .............................. ATTTCTACTATTATTGACAATATAAATATTATTAAA 50777 30 100.0 36 .............................. GAGTTGATTGTTGCTATATTTATAAATTTGGGATTC 50711 30 100.0 35 .............................. TTGCTAAAAAATGGCTTATAATATTCAAAACATAC 50646 30 100.0 35 .............................. TCTGCTAATAAAACATCTACTAAATAAGAGCTTGA 50581 30 100.0 34 .............................. TGAGGTATTGAGTTTGTTCTTTTTCTTTCGCTGA 50517 30 100.0 35 .............................. ATCAATAAGTGATGAATATTATAAACTTGGTGTTC 50452 30 100.0 34 .............................. ATTTCAATGTATTTAAAAAGTTTTCTTGCTATAT 50388 30 100.0 35 .............................. ACGAAATAAAAATAAAATATAATTTAAATTAAAGG 50323 30 100.0 35 .............................. CCACAAATCACAAAAGGTTGTTTATGGTCTTTAAT 50258 30 100.0 36 .............................. TCTGTTAGTAAAGTTCTTCTTCCTAAAACAGAAAAC 50192 30 100.0 36 .............................. TTTGCAGATATTACTCTACCCAAAGAAGTTTCATTG 50126 30 100.0 34 .............................. AAGGTAAATTTTTCAAGTGCCAGAGCTGGACTTA 50062 30 100.0 36 .............................. GGAAGGGGAACATAAGCTTCAGGCATTCTACCTTCT 49996 30 100.0 34 .............................. GATTTAAACATAGATCAAATAATGAAGTGGATGG 49932 30 100.0 36 .............................. TCGATTTGTTTTTTAACATTTAATATTTTCATCTTG 49866 30 96.7 0 .............................A | GT [49838] ========== ====== ====== ====== ============================== ===================================== ================== 108 30 100.0 35 TTGAACCTATTACATATAATGTATTGAAAC # Left flank : CCCTTTAAACTAAAGGATAAAATGTGAAGAAAGATACCTTTAACTATAACTACGCTTTTTTATTTTATGACATTGCTGATGAGTTCAGTGATGCAGGAAAATACCGTGTGGCTAAGGTGTTTAAAATCTGCAAAAAATATCTCAAACATCATCAAAAATCAATTTTCAGAGGAAGCATCACCCCTGCAAATCAAATAAAACTGGAAAATGAACTTAAAAAAGTGATCGATAAAAATCTTGATTTTATTTCTATTGTCAAAGTTCCAAATGCTAAAAGTTTCAATGAAACAATCCTTGGAACAAATCAAAAAGAGGAAGAATCTATTTTTATCTGATTTTTCCAACCGATTTTATAGACATCTTAGCTTACACATACTAGAATATGGTACTTTATAAGTTATTTAACAACTTATTGTTAAAATTCTTAAAATGATTGGAAAAATCGCTTTAAAGTCCTATTTTTAGCTAAATCAGTATTTTAAGAGCTCGATTTTTTCTTC # Right flank : TTTTGATTGAAATTTGACCCACTTTTTTGATTAAAAATGACCCACCTGCAGATTGAAATTATAACATTAAATTTCGTTATTTTTATTCTCTAAATTTTGTTTCTTTTTACTTTTTGGCAATAAATCTTTCATTCTATAACTTGGACCATTTATTAAAAATGGATGTGAATGATGTAAAAGTCTATCTAGTATTGCTGTTGCTATCACATCATCATTAAATATCTGTCCCCATTCTTGAAATTCTTTATTTGATGTAATTATTGTTGAAGATTTTTCATATCTCTTTGAAATAAGTCTAAAAAAAAGTGATGCTACTTCTCTTGAAAGGTCTAAGTATCCAATTTCATCAATTATTAGTAACTCTATTCTACTCATACTTTCAAGATAATCTGTTATAGTATTAGAGTGATTTGCAGCTATTAGTTCATTGGTTAAATCTTCAGCACTTATAAATTTTACTCTTCTTCTTTGTTTGGTGGCTTCAAGTCCTAATGCTATTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACCTATTACATATAATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 85934-86273 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053834.1 Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================== ================== 85934 38 97.4 39 T..................................... TAATTTAAAACACACTAAAAGATTTATATTGTATGTTTT 86011 38 100.0 36 ...................................... AAACCATATCCTGGAATTAATGCAAAAATTATTGCT 86085 38 100.0 35 ...................................... CAGATGGAATAACAATTCCCAAGTCTTCAATATAA 86158 38 100.0 40 ...................................... TTAGAACCAGCTTCTTCACCAGCTAATACATAATCTGTTT 86236 38 94.7 0 T.................T................... | ========== ====== ====== ====== ====================================== ======================================== ================== 5 38 98.4 38 AATTCAAATACAAAGACCCGATTTAAGGGGATTAAGAC # Left flank : ATTTTATCATATTTGTGAAAACTGTATCCCTAAATCTTTTGAACTTTGTAACAAAGGTGAAGTATTTGAAAAACAAGATTTTTTTATATAAAAAACCCAAAAAACGATTTGCGAACTTTTTTTGCCCATTTTTAGGCAAAAAAAGCTAAAATCGAGTTTTAAAAGTTCTCAAAAGTGGGGTACAAGTAAATCAAAATTTTAGATTTGCGAACTTTTAGTTTTTTTTAAGATTCAAAGGCTCATAAAATGGGACTTCTGAAACTTAAGAAAAGCTAAAAAATAGAAAATCTCTAATTTTTACTTTTTTGATAAATGATTTGCGAACTTTTTTTCTAAGAAAAGTCCATAAAATCGAGATTTTTAACAATTTATTGTCAAAATCATGAAGTTGCATTTTGAAAAAAGGTATACATTTGCGAACTTTTTAGTAAATAGCCATAAAAAGGGATATTTAAGAAGATTGAAAATATAATACCAAAGATGAAAGCCGATTTGATGGC # Right flank : CATCTTCTAAGAATTTTCCAAGCTAAAGTATTATCTATTCAAATACAAAGACTCAAACAGCTTGAAACAAGTTTCAAGTTCCTATTTTTAGGAAGTGAGGTTTTAACCTCGCCAAAGAAGTTTCAGCATCAAATATAAATAAAAATGGAATAAATGTTACAATTATTGTCATTTTGACATATTTATATAAAAATGTTAAACTTTCAAATAACAAAGGAGTTCACATGGAAATTACTAATACAATATTTGAAACCCTATTAACAAAGAATAATTTTAAGAAAAAAGAATTTGCTCAATATTCAAAAATCCCTTATAATACCGTTGTTGGTTGGAGGAAAAAAGGTTATGTTCCTGCTTATGCTATGGTTATATTAAAAGATATGATTTATAGAAAAAAACTTGATGAAGAAACAGAACAAACTTTAAAAAGAAATATACAACCAATAATAAATCAGAATCATAAACTGACAAAAAATGAAGAAAACAGATTAAAATCTGTA # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTCAAATACAAAGACCCGATTTAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.79%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //