Array 1 8793-10063 **** Predicted by CRISPRDetect 2.4 *** >NZ_JATO01000009.1 Aliarcobacter lanthieri strain AF1430 scaffold13.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 8793 30 100.0 35 .............................. ATCAAAAAAAAATGGTACGAAAGCCCTGAAAATAT 8858 30 100.0 35 .............................. AGTATTATTAGTGTGATTGATTTTACAAGTATTAT 8923 30 100.0 35 .............................. TTTGATAGTTTCACCTTTTTTAGTTTCTTCATCAG 8988 30 100.0 34 .............................. CCATTTGCATTTGACAGTTCAGGTACTTGTACAA 9052 30 100.0 35 .............................. ATCATTAATAAAGTCTATCGGCTTATCTCTATAAT 9117 30 100.0 34 .............................. AAAGCAATTAAAAACTGCTCTCTATCTCCTTTTG 9181 30 100.0 35 .............................. ACTGATCAAATACACCCCCACCATCTGTTGAGTCG 9246 30 100.0 35 .............................. TCAATTTAGTTAATCCTAAGGTGTCGATAAAAGGT 9311 30 100.0 35 .............................. AATTCTTCCACATTTTGAAATTGACGCTTGTGTTC 9376 30 100.0 39 .............................. TTTAAAAAATTTAATAAATGAAATTGACAAATATCCCAA 9445 30 100.0 36 .............................. TTAAATAGTGCAATAGATGAAGCCTTAGCAGAACTT 9511 30 100.0 37 .............................. TTAATCATATTGCTATGTCGAATCCATCAGGCACACA 9578 30 100.0 37 .............................. CTAAATAAACAAATACAAGCAGAGTTAGATGAATTTA 9645 30 100.0 34 .............................. AAACACCCAACACAAAATCAAAACATACAACAAA 9709 30 100.0 38 .............................. CCATTTTCTACCTCTACCTCTTGCACTTTTGTTGTAGA 9777 30 100.0 34 .............................. AATCAGGAGTTTAAATTTCAGGTAGATGAAGAAT 9841 30 100.0 34 .............................. AGTGTAGTTTTCTACTTTTGTTCCTGTTCTAATA 9905 30 100.0 35 .............................. TGGATAGAAACGATATTAAATCTATGAAAGGTGAA 9970 30 96.7 34 .....................G........ AGGTTCTAGCTATCTTAATTTGTTTATTGCTAAA 10034 29 90.0 0 .......................C.-..T. | A [10056] ========== ====== ====== ====== ============================== ======================================= ================== 20 30 99.3 35 ATTGAACTAAAACATATAATGTATTGAAAT # Left flank : TTCCTTTTAGACTAAAGGATAAGATGTGAGTAAAGATAAGTTTAACTATAACTATGCTTTTTTATTTTATGATATTGCTGATGAGTTTAGTGAAATTGGGAAATATAGAGTTGCAAAAGTTTTTAAAATATGTAAAAAATATCTAAAACATCATCAAAAATCTATATTTAGAGGAAATATAACTCCTTCAAATCAGATAAAATTAGAAAATGAACTAAAAAAAGTAATAGACAAAAATCTTGATTTTATCTCTATTATAAAAGTTCAAAACAGTGGAAGTTTTAATGAAACAATCATTGGAACTAATCAGAAAAAAGAGGAATCTATATTTATTTAATTTTCCAATCTATATGAGTTTAATTTAATAATTAAGTTGCTAAAATAGGAATCTAACAAAAGTTATTTTACAATTTATTGTTAATTAAATTTTTGATTGGAAAATATGGTTATATAACCTATTTTCAGGGAAAGTCTATATTTAAAGTATTGATTTTACCTTG # Right flank : TACCAACAGAATAATTAATTACATTATCTTAATAACTTAAATTATAAATGACATTCTTTATTTATTTTATCACTATTTTTTAAAATTCTCATAGAGTTAAATATAGCTAAGAGTGCTACACCAACATCGGCAAAAATGGCTTCTTTCATACCTATGATTGCATCTGCTCCTAAAACTAAGAAAATAACTTTTATAGCCATTACAAAAATAATATTTTGATATACAATAGTTTTTGTTTTTTTAGCTATTTTAATAACATCACTAATTGCATTTAAATTATCATTTAAAACTATCACATCAGCTGATTTTATAGCTAAATCACTTCCAACTTTTCCCATAGCAAAACCAATATCTGAATTTGCCAAAGTGGGAGCATCATTTATACCATCACCAACAAAAGCTGTAGTTTTTCCATTCTCTTTTTTTATTTCTTCATATATTTTTAGTTTATCTTGTGGTAAAAGTTCATATTTTACCTCATCTATTCCTATATTTTTTGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACTAAAACATATAATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //