Array 1 56-2096 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFEP01000027.1 Klebsiella pneumoniae strain TUM14382, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 56 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 117 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 178 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 239 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 300 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 361 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 422 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 483 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 544 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 605 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 666 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 727 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 789 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 850 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 911 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 972 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 1033 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 1095 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 1156 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 1217 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 1278 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 1339 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 1400 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 1461 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 1522 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 1583 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 1644 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 1705 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 1766 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 1827 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 1888 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 1949 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 2010 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2068 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CCCGCGCCAGCGGGGATAAACCGTAGTCATTTGCCGGTGACGGGAACCCCATAGCG # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //