Array 1 170635-174026 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCNJ01000019.1 Acinetobacter baumannii strain F, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 170635 30 93.3 30 ............................GG AGAAATATTTTTTTTGAAAAATTATAAAAA 170695 30 93.3 30 ............................AC TCCTGAGCAATTAATACGCAAGAGAATATT 170755 30 96.7 30 .............................C TTGAGTGTAGCTCATTGCTTACTGCTAAAA 170815 30 96.7 30 .............................G CTTCATCATCATTTAGAGATAAATATATAA 170875 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 170935 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 170995 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 171055 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 171115 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 171175 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 171235 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 171295 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 171355 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 171415 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 171475 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 171535 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 171595 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 171655 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 171715 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 171775 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 171835 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 171895 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 171955 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 172015 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 172075 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 172135 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 172195 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 172255 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 172315 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 172375 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 172435 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 172495 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 172555 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 172615 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 172675 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 172735 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 172795 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 172855 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 172915 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 172975 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 173036 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 173096 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 173156 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 173216 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 173276 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 173336 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 173396 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 173456 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 173517 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 173577 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 173637 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 173697 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 173757 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 173817 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 173877 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 173937 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 173997 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //