Array 1 916133-919060 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWH01000001.1 Clostridium cochlearium strain NCTC2909, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 916133 29 96.6 36 .C........................... TACGATATTTAAGCCAGAACCACTGCATTGGGCACG 916198 29 100.0 36 ............................. TATTTAGAAGCTACTAGACAACTTAAAGCAAATACA 916263 29 100.0 36 ............................. GTTATAACTAAGAGTATGGAGGATATTGGTTTAGAG 916328 29 100.0 36 ............................. TCTATTGCAGCAGGTGGATTTTTAGCAATGGCAACT 916393 29 100.0 36 ............................. ACTGGTGATATGAATTTAAGTAATGTAGAACACATT 916458 29 100.0 38 ............................. ACATACTTGCATCTTCTTCGCTTGCTAATTTACTTATA 916525 29 100.0 37 ............................. GTATATTGGTTATTTTCAACTTCTTTTAAGAGTTCTA 916591 29 100.0 37 ............................. CTTATATGCCGAACTGATTTATTGTGTTCTATAACTC 916657 29 100.0 36 ............................. CCTGTGGTAATACTTCCACTATTTTCATCGACATAA 916722 29 100.0 38 ............................. CCAAAGATAGCAGAAATAGAAGAATTTAAAGAAATAAT 916789 29 100.0 37 ............................. CCGATAATATTGGAAATATAACAATAGGGGTTAATGA 916855 29 100.0 37 ............................. ATCGCTTTATAATTTCTTGTATCTTTTTCAAATATTA 916921 29 100.0 38 ............................. TCTTTATATATTAGTCGCGGTAGCAATTTTAAATAATT 916988 29 100.0 38 ............................. TAAGAATAGATATATAAAATATGTAAATTAATTAAACA 917055 29 100.0 35 ............................. GGAATTGACGTTGGCTACAGCCATACAAAAGTATA 917119 29 100.0 38 ............................. CCAATTAGCATGTGTGGGAACTTATTCATATCTACTAT 917186 29 100.0 35 ............................. TCTTTTATGTTATTCATTGTTTATTCCTCCAGCAC 917250 29 100.0 37 ............................. CATGTCGCTTATAGTTAGTTACTATTTTATTTACTAT 917316 29 100.0 36 ............................. ATAGTATATGGTATTGCAAGTGCTTTGGGAATTTAC 917381 29 100.0 38 ............................. CGATCACTCTACGCATGTTGTACGAGTTGGAGGCGTGC 917448 29 100.0 38 ............................. GGAGAAAATGAAGAGGATAACGAAAATTTGTATGCTAG 917515 29 100.0 39 ............................. CTAAAGAAGATATAGAAAATGTAGACAAGAAAGTAGATA 917583 29 100.0 37 ............................. TACACACACATCTAAAAACTTATACAGCAACCTCCTA 917649 29 100.0 37 ............................. CTCTCAACTCAATTAATGTCATGATAGCGTAGTTGGC 917715 29 100.0 36 ............................. ACAAAAGATACAATGGAAAGAATTGCTATTGCTCTT 917780 29 100.0 37 ............................. GAAGGAGACAACGGGGTATATGTAGTAGACGGATGGG 917846 29 100.0 38 ............................. TCTTTAGTAAGATACACGCTGCTGTAGAAACTTGTATT 917913 29 100.0 36 ............................. TAAAGATATACTACCAATTTTAAAGAAAATAAAAAC 917978 29 100.0 37 ............................. TTGTATATATTGTTATAATTTCTGTATTAAGTGTATT 918044 29 100.0 36 ............................. AAATGTTACAGAGTATAAAACTACTTATCAACTTGA 918109 29 100.0 36 ............................. TGTCTATATTGTAAAATAACTTTTCAAATTTGAAAA 918174 29 100.0 37 ............................. CACTTCATTAGAATCTTTATTAGTTGGAATATTTAAT 918240 29 100.0 37 ............................. ATGTCGTAGGTAGGAATAATCCCTCCATCGTGATAAT 918306 29 100.0 36 ............................. TGGTGTTTTTTAAAGTTTGTGTTTTACTTTTTAGGG 918371 29 100.0 38 ............................. TCGTTATCTGGAATATGCATAAAAGATAGCAGATTTAT 918438 29 96.6 35 .................C........... TTATTTATATTATATAATATGTGTCAGAATAAAAA 918502 29 100.0 37 ............................. TTGTATCTGTTGCAAATCTTCTCAAAATCATTGCTAA 918568 29 100.0 37 ............................. GATGATCCATACCTCTATGAATTTTTCTGTTACATCT 918634 29 100.0 38 ............................. TGATATATTGAAAGGTGGATTAGTGATTATTACATCAA 918701 29 100.0 38 ............................. CTTCTTATTGCTATTTTCATTTGACCATCCTTTCCTTT 918768 29 100.0 37 ............................. TTATGGAATGGTAAAGGAACAGTACAAGTAATCCCTA 918834 29 100.0 38 ............................. AATGAAAATGATTATGAGAGTTTTGGATTTGGTGATGT 918901 29 100.0 36 ............................. TATCCTTTTTTATAAAACATGAGTGAGTGGAGATAC 918966 29 100.0 37 ............................. TTTAGTGATGAACTTAGAAAAAATATTAATCAAGAAT 919032 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 45 29 99.8 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : AAAGCGTTAAAGGCTTGGTGGTGATATAATGTTTGTAATACTTACATATGATGTGGAAGAGAAAAGGATAAATAGAGTTAGAAAATTACTTAAAAAATATTTAACATGGACTCAAAATTCTGTTTTTGAAGGTGAAATAACAGAAGGTAAACTTCATAAGTGTTTATGTGAAATAGATAAGATAGTAAATAGAAATTCGGATTCAGTATATATATACATTGTAAAGAATTCTAAAAATATAACAAAAAGTGTAATAGGAATTGAGAAAAGTTTTAATGATTTATTCTTGTAAAGTAAAGTTTTATTTGTAAATCTGCAGTAAAGGTAAAATTTAAAAAAACCACTTCTAATTATTGATTTAACTAAATTAGAGTGATGTTTTTTAAAATACCTAAAAACATTATCGAAGGTTTACTGCAAAAACTTTAAATTTATGATATACTTGATATGGAACAAACTTAGTGATTTCAATGCTTTGGCTGTATTTAAAATTTAGGGGG # Right flank : TAAGGACATGGTATAAATGTCAAGATTAAAATGTAACTTTTTGATCATTTAAGAATGTAGTTTTTTACTCATCGTCATCTTTAAAATGATCTTTTAAGCGATAAGATTTTCCATTAATAGGTACAACATGAGCATGGTGCAATATTCTATCCAAGATAGCATTTGCAATAACAGGATCATAGAAAATATCATCCCATGCATTGAAATTTATATTAGTCGTTAAAATTGTACTTTTTTTCTCATATCGCATATCAATGAGTTGGAAAAATAATTTAGAGTCTTCTTTATCTATCGGTAGATAGCCTAGTTCATCGATTATTAGGAGCTTATACTTACTAAAATGTTTAAGTCTAGAATCTAATCGATTCTCTAAATTTGCACGTTTTAATTGCTGCAATAAATCATGACATTTAATAAAGTATGTACTATATCTACGTTTTGCTGCCGCAATTCCTATAGATGTGGCAAGATGCGTTTTTCCTACTCCGCTAGGACCTAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 979012-981124 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWH01000001.1 Clostridium cochlearium strain NCTC2909, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 979012 30 100.0 38 .............................. AATATACCAGTATTAAATATGTGATATAATATAAGCAG 979080 30 100.0 39 .............................. ATGCTTTAAGACATCAATTAACCTTGCTAGAAGTCGATA 979149 30 100.0 36 .............................. TATTCTAGTTCATAGCTTTCTTCTAATTCCAATAGA 979215 30 100.0 39 .............................. TGGGTAGAAAGAAAATCGAGAACGCAAGATATACTTATG 979284 30 100.0 35 .............................. TTGCAAAATCTTTTAATCCTAAGTCAATTCCTACT 979349 30 100.0 38 .............................. AAAATTACAATGGGAAAACAAATGAAATAACTAATTTT 979417 30 100.0 39 .............................. TTTTTCTTTTCCCTGCTTCTATTGTATCGTCTGTAATTA 979486 30 100.0 36 .............................. GAAGTTGAAAGAGGGAATGGAGCAAATGCAAGAAGT 979552 30 100.0 36 .............................. TCGATACTGAAATAAAACAATTAAAAAAATCAAATA 979618 30 100.0 37 .............................. AGTAGATACTACGCTCCTATTCTTTACTAAATCCCTA 979685 30 100.0 37 .............................. ATGACTTAATACACATATTATTCAAGGGGATAGACCT 979752 30 100.0 39 .............................. AAATTTCAACAACGTACTTTATCAAGAATGAAATTAGGA 979821 30 100.0 36 .............................. TCCGGAATTTTAGCACAGGATAATAAAAAAGTTTTA 979887 30 100.0 38 .............................. GAACAATGTTGGAGTATAAAGCTAATTGGTATGGAAGA 979955 30 100.0 36 .............................. TAAACTAGGAATAAATATAAAAGCAAGAGATAAGAA 980021 30 100.0 39 .............................. CTTTCACTAACCTTTTGAACCTTAGCATGTTTTTTAACA 980090 30 100.0 38 .............................. TTTGTTCTTCTATTTGAGGATAAATTATATCTTCATAC 980158 30 100.0 38 .............................. AACAAAAGATGAATTAATTAAATAAAAGGAGTTTGATA 980226 30 100.0 36 .............................. TATGGACCTTAATAAATTAAATGGTTATATAGGTAA 980292 30 100.0 39 .............................. CGTTGTATGTATTTCCAGAAACCCAGATCCAAGTCCCGC 980361 30 100.0 36 .............................. CTATCTCATCTCTTATATAGTTGTTTATGTTCTCTT 980427 30 100.0 36 .............................. TAACTCAGTTAAATATGTATTTAATAGAGTTGTAGT 980493 30 100.0 38 .............................. GTAATCAAGACGTATTTAATGACAATGGCAGTGGGTAC 980561 30 100.0 35 .............................. ATTGGAGTATTAAGAAGGCAGCAACCACACCGATT 980626 30 100.0 37 .............................. TGGTTATAACAATGATAAAGAATATGAGGAAATTTCT 980693 30 100.0 36 .............................. TCGTTGTGCTGTTTCCAACTTTGGTCACGTGTCTAA 980759 30 100.0 36 .............................. TGGGAAAGGGCTTTTTAGGTTGAACCCTTTAGAACC 980825 30 100.0 39 .............................. CATTTTCCACGAATGGTAATCTTAAAACTTCTCCTAATG 980894 30 100.0 35 .............................. CCAGCTTGGTTAACATTAAACAATTAAAAATAAAG 980959 30 96.7 39 ....................A......... AAAGATTCTTCGTTACCTCCAAGTCTGTCCGGATGTAAT 981028 30 100.0 38 .............................. TCTTAAAATACATAGTAAATAATAGATAAACATACATA 981096 29 76.7 0 ...............G.A..C.-.CA...A | ========== ====== ====== ====== ============================== ======================================= ================== 32 30 99.2 37 GTTTTTAGAATAACTATGAGGGATTGAAAC # Left flank : ATGATGAGGAAATGGTTAAATGGTTTAGTGAACATAATAAATATGCTGTTGAGGAAATAGGAAGAAGATTTTTAGAGCTATATGAAAGGAAAAAATGGAATCCGGATAAAGAAATTTTAGATAAATTGAGAAAAAATTATATTAAAATAGAAGGAGATATGGAAGAGTTATCAGAGAACTCTAAGGGAGAAATTCAAGGCGGAGATATTGAGATTTTAAACTATGAAGATATTGAATCTTGGAGCGATAAGTTAAAAGATGTTGATGATATATTTTAAGATAATTTTATGTTTAATATTAAGAAAATAATTATTAACTAATAACAATTTACAAAGTCGTCGACCCCCAATCCTGTAAAAAATGCGGGAGGTCGACGACAATTTTTAATTGCCTCGTAAGTATTGATTTCATTGATGTAAAGCAATATTTATATATTTTTGTTTACACTTTGTTAACAATGGATAGTTTTAACAAAGTGTGTTATAATGCAGATGTAATTG # Right flank : ATTAAGTATCTAGAAAACATACCCTCCCATTGATAAACTTAAGTAAAAGATTATCAATGGGAGGTTTACTTATGTATAAAAAATTAGATAATGATGCTTGGGAGGAATATTTAAATAAATTTAACTCTGTTAAAGATACAATAACAGTGAAAGATTTCTGTGCTGAGAATAACCTTAATAAGAGTCAATTTTATTACCATAAAAAAAGAGTAGAAAAGGCAATTGAAAGTAAAGAACCTGTTTTTCAGCCTATTTCTTTGAATAGTAAAGTTGATAATACTAAAGAAAATAAATCTACATTAAAAGAAGTAAAAATTAATGTAGGCAATGCTAATATCCTTATTCCTGTTAGCGAAGCTACTTTAATAACAGCAATAATTAAGGAGTTAATTCTAAAATGTTAAATATAGATAAGGTAGAAAAAGTCTATCTTGCCTGCGGTTATACGGATTTAAGAAAAAGTATTGATGGTTTAGTTATGATAGTGCAAAACCAATTTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGAATAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 992805-993298 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWH01000001.1 Clostridium cochlearium strain NCTC2909, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 992805 30 100.0 37 .............................. GAAAATTCACGAATAGTGTAAAAGATGCAGGTGGAAT 992872 30 100.0 36 .............................. CAGATTCGGCTGTTAGGTAGTCGCCTAACTGTTGAT 992938 30 100.0 38 .............................. AAAACTTGAAGAAACATTTTTCTTTTTGTCGCTGTGCT 993006 30 100.0 36 .............................. TTAAATACATAATCTATTTTTTTGAATCTGTTTCTT 993072 30 100.0 37 .............................. TTTAATGCATTAGTAGCCTCTGTAAAAGGTTTTCCCC 993139 30 100.0 36 .............................. GAAGCTCCGCCAGATTTTGTGTATGTCGTTCCTTTG 993205 30 96.7 34 A............................. AAAAAATGAAGTATAAACGACCGTAGAGTTTTCT 993269 30 96.7 0 A............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 99.2 36 GTTTTTAGAATAACTATGAGGGATTGAAAC # Left flank : GACGCATATGTTTGCTATATTAGTTTACGATTTTGGTGAAAAAAGAGTGGGCAGAGCTTTAAAAACTTGTAGAAAATATTTAACTTGGGTTCAAAATTCTGTGTTTGAAGGTGAAATAAGTGATGCTAATTTAAAAAAGTTAGAAATGGAATTAGATAGAATTATGCATAGTAATGAAGATTCGGTAATTATATATAAGTTTAGAAGTACTAGATATACTACAAGAGAGGTTATAGGTCTTTCAAAAAATGAACAAGATATATTTTTATAGAAAATTTCGGAAACCATCGTTACTTGTTTTAATAATGATTATTGGATAAGAATTATTTACAAAGTCGTCGACCCCCAATCCTGTAAAAAACCCGGGAGGTCGACGACAATTTTTAATTGGCTCATAAGTATTGATGTTATTGATGTAAAGCAATATTTGTATATTTTTGTTTACACTTTGTTAATAATGGATAGTTTTAACAAAGTGTGTTATAATGCAGATGTAATTG # Right flank : CCATAATAAAAAACACCTTACTCCATACTATAGATTAAAAAATTACATATAGAGTAAGGTGTTTTTTAATAGAAAAATAAATGAACCGTCTCCTAGATTTTACTCTTGAAATACTCCCCAGGAGTTTAAGTTATTAGTACATCCTATCCAAATAGGAGTAAGCGTCAAAGTTTTAGCACCTTTAATAATTCCAAGAATAGTATTAAAATATCCTAGTAAGGCAAGAATATGCTTTACTAGGATTAATTTATTTTTTATCTTTAATTTTCATATTTTCAGGAATCTTATCATTCCAAGGCATAAGATTCTCTAAGCTTTCGCTATCGTATATATCTATCTTTGATAGATTATCAAATAGATAGACTAAGTACCTTTCTACAACTAAATTATTAGCCTTGGCAGTTTCAACAATACTATAAATATTGCTACTTGCAGTTGCACCCTTAGCAGTGTTAGCAAATAAGAAATTTTTTCTTCCTATAACGAAAGGCTTAATTGCT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGAATAACTATGAGGGATTGAAAC # Alternate repeat : ATTTTTAGAATAACTATGAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 4 1192472-1192047 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWH01000001.1 Clostridium cochlearium strain NCTC2909, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1192471 30 100.0 35 .............................. GTATGATTTATTTCTAACTCTTTTCTAGTTCTTTC 1192406 30 96.7 36 A............................. GTAGTTATGTATTGACTTATTCCATCTAATAATAAC 1192340 30 96.7 35 C............................. TCTTTATGAGCTTTTAAGACTTTCTTAGTTTGATT 1192275 30 96.7 34 T............................. AAAATTTAATTTAAAAGACTTTACGCCCTCTATA 1192211 30 96.7 38 .........................A.... GATTTTATGCCTTTCACAATATTTCCTGTTGCAGTTGC 1192143 30 93.3 37 .T...A........................ ACTAGAAAAATTTAAAAAAGCTCCTTCTGTTGGGTTT 1192076 30 93.3 0 A..........................G.. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 96.2 36 GGTTTTATAGTTCCTATGAGGAAGTGAAAT # Left flank : ATTTTTAAATAGTATAAAAAATAATATAATAGCAAAATATAATTCATTTTATAACGAAGAATATAAAGGAATTATGAATATAAGTATATTAGATGAAAACAATATAAGAAAAAAATAGACAAATATAAAAATTGGATATATGAAGGATATTTAGGTGCTTTTATAATAGAGGGAGATACTAAAATAGTAGAACTTGCTTATAGTTGTGGATTAGGTAGTAAAAGTTCTCAAGGGTTTGGATTCGTTGAAACATTTAAAGATCTTAATAGTATTAAGAATTATAGAAGAATAATTTAAGTTTCAATGGTTTAATATTTTGCAGTGAACTGTATTTTTTATAATATATGCTTAAAGTATTGATTTAACTGAATTTGTTGGATGTTAAACAAATTTTACAAAAACACTATTGGAGGTTTACTGCAAAATGTATCACTTACGATTATTCTTAATAGTATTGAAAACAAGATATAACCTTGATTTACAGTGGTTTTGAAAATTGG # Right flank : AGGTGTTTCTCTTTTGCTTTAGCTATAATGAATGTATTTCTAATGTTTTATGAAAGATAAACAGTTATGTAAAAATCATGGCATGATAGTATATATAGTAAATCAAAATTGTACATTAGTATTTACCAATAGATTTTGATTTGTATTTTAGACAAAATAAGAAAAGTACAGATATGATTTATGGCGTCTATACTTAAATGGATTAAAATTATCGGGGAATTTTTAATTCTTATAGATAATGAAATACCAAGGGAGGAAGCGGTTTCGAAAGTTCTAGCAAAATTTGGCGTTCCTAAAAGTGAAATCTGGGAACATGGAAATTTTTAACACTATTAATGTCTAATAAAATACATTCAGCAGGTAATATTAATGCCCCTCTATATATGCAGAGGGGCATTAATATTTAAACATGTCTATACATGTCCTATGTTTTACTCCATTTATCTTAGTTCGTCTATTAATTTGTTAATTATTTCTGGAGGATAATTTTTACATAGAAC # Questionable array : NO Score: 3.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTTATAGTTCCTATGAGGAAGTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.00,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //