Array 1 86969-84377 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAOY010000008.1 Arcanobacterium phocae strain ARC131 NODE_8_length_102232_cov_74.887886, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 86968 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 86907 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 86846 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 86785 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 86724 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 86663 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86602 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86541 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 86480 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 86420 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 86359 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86298 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86237 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86176 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86115 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 86054 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 85993 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 85932 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 85871 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 85810 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 85749 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 85688 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 85627 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85566 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85505 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85444 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85383 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85322 29 100.0 32 ............................. ACACGGATCAGCGTCGGAGCCTCATCTTGTAA 85261 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85200 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85139 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85078 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 85017 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 84954 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84893 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84832 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84771 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84710 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84649 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84588 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84527 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84466 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84405 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 43 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //