Array 1 2365-24 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWFH01000044.1 Alloscardovia omnicolens strain 1036_GVAG 88_23006_319771, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 2364 36 100.0 28 .................................... ACTTTGAAAGGTACGTGATTATTATGGA 2300 36 100.0 28 .................................... TCGATGGAAGAGGTGATTATGTAGACCG 2236 36 100.0 28 .................................... TTTCTAAGCGGTAAACGTCATAGTTCCA 2172 36 100.0 28 .................................... TTTTATCCATAATGCAGCCTTTTACTTA 2108 36 100.0 28 .................................... CGCGCTCATGCCTGATAATGATATTGGA 2044 36 100.0 28 .................................... TTAGCCCAATCGACGAGATTAGCGAGTT 1980 36 100.0 28 .................................... AAGCGCAGGAATAGCCAAAGGTACAAGA 1916 36 100.0 28 .................................... AGCTACTGAGGTCACGCACGGAGCGAAC 1852 36 100.0 28 .................................... AACCCCGTAATAACTTAAGAAGGCATTA 1788 36 100.0 28 .................................... CCAGTTTGTAGTTCGAAAATCTCCGCCT 1724 36 100.0 28 .................................... CAGTCCTTCAAGACTTTACGGGTAGAGA 1660 36 100.0 28 .................................... TGGTGTGAAATCTGGTCAGACGTTTGCT 1596 36 100.0 28 .................................... AATATTTGTAGAAAGAGAAGGTAAATAT 1532 36 100.0 28 .................................... GGATTCTAAGGATATTTACGTGAGAGTT 1468 36 100.0 28 .................................... TAGCGGTATCATCATCGACGATACGCCA 1404 36 100.0 28 .................................... GCACGGAGTTCATGGATGGCATGTTCAC 1340 36 100.0 28 .................................... AGCTTCACGCACGATGTACTTCAAAGCC 1276 36 100.0 28 .................................... GGATATTAAGGATATTTACGTGAAAGTT 1212 36 100.0 28 .................................... CAGTCCTTGAGGGTTTTACGGTGAGAAA 1148 36 100.0 28 .................................... TTACTATGAGGCACGATAAATCCCAAAG 1084 36 100.0 28 .................................... TTATTGGCTCGCTTATTACTTTTAAATT 1020 36 100.0 28 .................................... CCTCGTTGGATATGTGAGAGCTGTTGAA 956 36 100.0 28 .................................... TAGCTCTTTACCTTTTGGTGATACTGTT 892 36 100.0 28 .................................... TGATTGGCGTATCGTTAATGACGATACT 828 36 100.0 28 .................................... CTCCTTTATATCTTGCGCTCGCGGCTCA 764 36 100.0 28 .................................... CCGTTAGCGCCGTGCGTGACCTCAGTGG 700 36 100.0 28 .................................... TAATCTTATTAGCTTTTCAAGCCGCGAG 636 36 100.0 28 .................................... CCTCGTCGGATACGTCCGAGCCACTGAG 572 36 100.0 28 .................................... AAGCACAAATCATGGGTACAGTAGGAGC 508 36 100.0 28 .................................... CTCCATACTGTGTTGAGTTATAAAAAAT 444 36 100.0 29 .................................... TAATGTCAGTTGCTAAATCCTCTGCTAAT 379 36 100.0 28 .................................... CCTTGCCGTTACCTTGGTGTTTTGCGTC 315 36 100.0 28 .................................... AAACCATACAGCGAGCATTCCATCCGTG 251 36 100.0 28 .................................... AGTCGCCTCTGTAAATCTGGCTAATTGT 187 36 100.0 28 .................................... TCAACGTACTCATCATTCCTACTTATTC 123 36 97.2 28 ...................................T CGAAGATGATGTAATTCATGCGATTCGT 59 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 37 36 99.9 28 CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Left flank : CAATGGAGAAGGTCTAACAATTCCAAGTAAAATTAATGATTTTGCGCAACAATATGCACTATATGTTGAAGATAAAATTCAGCAGATTGCAATTCCACAATACGTTAAGGATTAACCATGAAAGTTGATGAGGACAGTGGGGGAATGTGGTGTTTAGTAATGTTTGATCTCCCTGTTCAAACGAAGCAACAAAGACATGCTGCTGTAGTATTTAGAGATTTATTACTCGATATGGGTTACTGCATGATTCAGTTTTCTGTCTACGCAAGATATACGCCAACAGCTGAAGGAAATCGTTCCACAGTTCGGACAATTAAGGATAATTTGCCACCGCAAGGCAAAATTCGAGTCTTACATATTACAGATAAGCAGTGGTCGAAATCGTTACGATATGTGAATCTAGAAGAAGAAAATGATGGTGAAACACCGAAAACTTTAATGCTTTTTTAACTGCGAAAAGCCTTGAAAATGCTGGAATCATCCCCTTTGATTAGATTACT # Right flank : CATGTGATTCTTTGCTTGGTTTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //