Array 1 1067346-1072315 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP067066.1 Raoultella sp. XY-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1067346 29 100.0 32 ............................. CTGAGTACCGCACAGAGATTGGCGAGGTCACA 1067407 29 100.0 32 ............................. GCTCAACGGTAGACACTAAAATCATCTGTGCA 1067468 29 100.0 32 ............................. GTTTTCGACGTGGCATTGATGGATTTCGGCAC 1067529 29 100.0 32 ............................. CAGTACCGCGATCAGGGACTGATTAGTGAAGA 1067590 29 100.0 32 ............................. CAGTGGTTATAGCCTCGTGAGAGGCAATAACA 1067651 29 100.0 32 ............................. GACGGGAACAAGAGCCAAAATACAGTGAAGAA 1067712 29 100.0 32 ............................. CAAACAGATATCATCCGCCATTGGGGTGAGCT 1067773 29 100.0 32 ............................. GTCAGGATTGATGACTATCGGCCTTGATGGCA 1067834 29 100.0 32 ............................. GCCTCGGTGGATACAGAGAAAAAATCTGCGGC 1067895 29 100.0 32 ............................. GTATATCTCAAAGCTGGAAATGTTCAGCTGGA 1067956 29 100.0 32 ............................. CACATCCGCCTGCAGGACATTGCGGGGATGGC 1068017 29 100.0 32 ............................. CGCCATTAAGGGGGGCCAGGAGGGGGAATATC 1068078 29 100.0 32 ............................. CCATTGCTCTGGGGTGATGTTCTCGCCAGGCG 1068139 29 100.0 32 ............................. TGCTTTGCTGACGTCATTAGTCTTATCACCTG 1068200 29 100.0 32 ............................. CCGGACATAACGTTCTGCGGGGTGATGGTGGC 1068261 29 100.0 32 ............................. ATGTAGGCCCGCGATACCGCCCACAGATCCGC 1068322 29 100.0 32 ............................. CCCGCGATACCGCCCACAGATCCGCCGCCGTC 1068383 29 100.0 32 ............................. GCCGGTAGAACCGGATTTTTGCGAATGGTTAG 1068444 29 100.0 32 ............................. GCGGCTTATCGCCGCCCTTCCTTAATCCAGTC 1068505 29 100.0 32 ............................. AACTGGGCGGAGGCAGAGGAACGCGACCGCTG 1068566 29 100.0 32 ............................. GTTATCCCGCTCGCGTATGAGATTGACCAGCT 1068627 29 100.0 32 ............................. GTTAGCTCCGCCAGCAACATCAGTCACGCGGC 1068688 29 100.0 32 ............................. ACCAGTACCGATGGACGTATAACCGGCCTTGT 1068749 29 100.0 32 ............................. CCTCCGGAAATCGGAGCCGCTTTACTGGTGAG 1068810 29 100.0 32 ............................. CAGTATAAACGCCATTCACGTTCAGGCTTGCA 1068871 29 100.0 32 ............................. GGCGCATAGCCCAACCATTTTGAACAATCAGC 1068932 29 100.0 32 ............................. ACCGCGCCGGTAACGTAGTTCCTAACGCAACT 1068993 29 100.0 32 ............................. AAATCAATATCCGTTTACGCCTGGGTTAAGGC 1069054 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 1069115 29 100.0 32 ............................. CATTTGTCCAGTAACAACCCGTCTACCCATAC 1069176 29 100.0 32 ............................. ACGCACGCGACACATGGCGCAGCGTAAAACGC 1069237 29 100.0 32 ............................. CGGTGTTTACTGGCGCGGTGACACCCGCCCGC 1069298 29 100.0 32 ............................. TACAGGTGAGCTTTTCCCATCCTGGTATGTGA 1069359 29 100.0 32 ............................. CGTTCGAGAAGACCCTTCGCGGTGAGTACGCC 1069420 29 100.0 32 ............................. CTGGCATTAATAGTCACTGAGATGGTTTACAA 1069481 29 100.0 32 ............................. CTCTTTCGCTACCGCCGTGATTACCTCTTTTG 1069542 29 100.0 32 ............................. GTATTTTTAATGGGGGTATAGGATGGGTGTTT 1069603 29 100.0 32 ............................. CCTGACTACCAAATGCATCTACCGCGGCGCCC 1069664 29 100.0 32 ............................. ATTATCTACAGCCAACTTACTACGAATAGAAT 1069725 29 100.0 32 ............................. ATAGCAACCATCGTTGGATGAAAACTGGCTGG 1069786 29 100.0 32 ............................. ACGGTGATCACCCTGACGTTTGTCATTTTTGC 1069847 29 100.0 32 ............................. CACAACGTCGACAACGGCGAGGCTGGCTCTGT 1069908 29 100.0 32 ............................. GTAGTGATGGCGGTGGCTCCGGTGGTGGTGCG 1069969 29 100.0 32 ............................. CGAGAGATCAGGCCAGGAAAATTACCTTCTCC 1070030 29 100.0 32 ............................. AACAGAACGTACTCCCACAGCGTTCTCAGTAG 1070091 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 1070152 29 100.0 32 ............................. CCTCTTGAAACTCAGGATAGTACGTTAATACA 1070213 29 100.0 32 ............................. ATAACGCTCAGGATATAATCGCTGCCTGATGT 1070274 29 100.0 32 ............................. GAGCGCGGGATCCTGACCTGGGGTTACGGCCA 1070335 29 100.0 32 ............................. ATAACGCTCAGGATATAATCGCTGCCTGATGT 1070396 29 100.0 32 ............................. GAGCGCGGGATCCTGACCTGGGGTTACGGCCA 1070457 29 100.0 32 ............................. TGTCGTTTAACGGGTACGAGTGGTCCGTTGTC 1070518 29 100.0 32 ............................. CGGGATCTGCGGTATCGCGTAACGCAATTTGC 1070579 29 100.0 32 ............................. TCGCCGACGCTACCGCTAACGCCGCGGCCGCC 1070640 29 100.0 32 ............................. CCAACAGAATCCGCAGACAAAATGATGTTTGA 1070701 29 100.0 32 ............................. GATGTGTACACGTCCATCCCTGGCTATGTGCT 1070762 29 100.0 32 ............................. GTCCTTGACGGCATTAATCACTCAGGGCTTGG 1070823 29 100.0 32 ............................. GTACCGTATCAGGGCGTTCGTCCGACGCGACC 1070884 29 100.0 32 ............................. ATACTCGCCGCAAATTTCAGCCAGTTTCCCGT 1070945 29 100.0 32 ............................. TCACTGTTTGTACTTTGACGTTACTTGCTCAA 1071006 29 100.0 32 ............................. GACGCCATGTGACAGTGGATGGTCGCCTCAAA 1071067 29 100.0 32 ............................. TTATAAACTGTAATATGCATGCGCAAGCAGGC 1071128 29 100.0 32 ............................. CAATATCAATTTCCCGCAGGATCAACGTCCCA 1071189 29 100.0 32 ............................. CTCATCTCCTTCAAACCATGCCAGCTTAACAT 1071250 29 100.0 32 ............................. CGGCTATTCACACGAAAGCAGCTACCGCACCT 1071311 29 100.0 32 ............................. GTAATCCCAGACTGCAATAACAGTGGGGTAGC 1071372 29 100.0 32 ............................. CGGCGCGTCTGAATGTTGATATTTTAACCATT 1071433 29 100.0 32 ............................. TGTCTGTTTAACTCTGTGGATAACCTGGAGGC 1071494 29 100.0 32 ............................. CCGTTGGTGTTTGTCCTCGGGCATATTGAAAT 1071555 29 100.0 32 ............................. AATATCAGCATGCCGCGCGCTGCCCAGCTCAG 1071616 29 100.0 32 ............................. ATGCCATTGCGAACACTACAACTGCGATAAAT 1071677 29 100.0 32 ............................. ATGACGAAGATGTGATATCTGCATATGCAGGT 1071738 29 96.6 32 ............................A CCACCACATCAGAAGCCGACGATGGCGATGGC 1071799 29 100.0 32 ............................. TTGGATCATTTCTTCTTCAACATTCTCCCACG 1071860 29 100.0 32 ............................. CTTGCTGCACGTTGGGGTATCTCTGAGATCAG 1071921 29 100.0 32 ............................. GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 1071982 29 96.6 32 ............T................ CTATATATTGTCTGGTCATCATCACCGACTAT 1072043 29 100.0 32 ............................. GTTCGGCAATCGCCCTGGTGCTGCCAGTGGAA 1072104 29 100.0 32 ............................. CTTTCACGTTTGCTCATAGGGATTTTTTTTCC 1072165 29 100.0 32 ............................. TGCAGATATTTCCCTGATTTGGGGATCCAAGA 1072226 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 1072287 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================ ================== 82 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGACTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : GCAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAATGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //