Array 1 43472-40271 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGFP01000001.1 Streptosporangium minutum strain M26 scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43471 29 100.0 32 ............................. CCCAAGGCCCCATGCTCACGAGCAGGATGCGA 43410 29 100.0 32 ............................. CAGCGGGGCACCGCATCACAGCGAGGCTACGG 43349 29 100.0 32 ............................. ACATCGGCATCGGCTCCGACCGCGGCCGGTCC 43288 29 100.0 32 ............................. CCACGCGTCTCCCAGGTCTCCAGCAACGGGAC 43227 29 100.0 32 ............................. CAGCTGATCGCGCTGGAACAGCAGCTGGCCGC 43166 29 100.0 32 ............................. GGCTGGACGCAGCGCGGGCTCGCGGGCAGCGC 43105 29 100.0 32 ............................. ACAGCGACTGCAACGACATGACGCGGTGTCTC 43044 29 100.0 32 ............................. CTGACCGAGCGGGCCGCCTCGGTCGGCATCGA 42983 29 100.0 32 ............................. ATCCCCGGTCAGGAACCACCCTCTTGGCCGAA 42922 29 100.0 32 ............................. CCTGAGCGGAGGCAACCGGGAGCTTGTTGGGA 42861 29 100.0 32 ............................. CCTGAGCGGAGGCAACCGGGAGCTTGTTGGGA 42800 29 100.0 32 ............................. GATCATGCTGTGAAGGGAGCTTGATCATGGCG 42739 29 96.6 32 ............................T CCGCCACAGCTTGCTCGCCGCGGCCCAGGCCC 42678 29 96.6 32 ............................T ATGTGGCCGAACGATGGGGGATGGCCCGCCAG 42617 29 100.0 32 ............................. GTGGTTCGCCCTCGGTCAAAGGAAGCGGAACC 42556 29 96.6 32 ............................A CTGTGTAGGGCTAGTGCACACTCCTGTGTAGA 42495 29 100.0 32 ............................. ATCGGAGTGGCCGCGCACTCGAACCCCGGTAA 42434 29 96.6 32 ............................C CTACTGGGACGGGGATGACATGTCACGTGGCG 42373 29 100.0 32 ............................. GAGCAACCTCCTCGTACCGTCATCCCGCCGGC 42312 29 100.0 32 ............................. CCAACTGGGCACACACGGTGGACGCCGACACC 42251 29 100.0 32 ............................. ACAGGCCCCGCTTCCGAAGGCCCAGTAAGAGC 42190 29 100.0 32 ............................. GACGCCCTGCGTGATGTCCAGGACGCCCAGGA 42129 29 100.0 32 ............................. CCAACCCTGGCCTCGGGACGTCGCCGACCGTC 42068 29 100.0 32 ............................. GTCTACTCGGATCTTGTCGCCGCGCACCCGCC 42007 29 100.0 32 ............................. ACATGACGTGGTGGCGACGTACGCCCGACGCT 41946 29 100.0 32 ............................. ACATGGTCGTGCGCGCGGCGATCGCCGCGAAG 41885 29 100.0 32 ............................. ACCGCGTGGGACACCGTCATCCAGCCTGCCTT 41824 29 100.0 32 ............................. GCGTCGTCGGATCTGCTCGATCTCATCGCCCA 41763 29 100.0 32 ............................. CGTGCCGCTGTGAAACGCCGGTAGGGGAACGG 41702 29 100.0 32 ............................. TCCCCGCGGCTTGACCTCCTGAATCACGATCC 41641 29 100.0 32 ............................. TCCGCGACTGGAGGTCCGCCTGCTCGGTGTAG 41580 29 100.0 32 ............................. GTGCCCTTCCCGTCAGGGCGTGGCAGACGGCC 41519 29 100.0 32 ............................. TGGGTGAGGGAGTCGATGACGACTGCGCCGAA 41458 29 100.0 32 ............................. GCCCGCGACCCGTTCCGGCGGATGCTGAAGAT 41397 29 100.0 32 ............................. TTGCCGCGTGATCGTCCGGTGTGGCGTCGTGA 41336 29 100.0 32 ............................. CCTCCCCGATCGGACATACCAACGCAAGAGGA 41275 29 100.0 32 ............................. TTGCTTTCGGACCCGCCGGACCTGTCGCCCGC 41214 29 100.0 32 ............................. ACGGGTCGCGGCGACATCGGTCCACCAGTCCC 41153 29 100.0 32 ............................. TGACGTTGCCGGCCTGACGCCCCTGCCCTTCG 41092 29 100.0 32 ............................. GCCGCGACCGCGAGCCCGGCCGGCGTGAACCT 41031 29 100.0 32 ............................. ACGCTGAACGAGATGGACCACCAGCAGCAGAA 40970 29 100.0 32 ............................. GGTCTCGTGTGACGCTGACACGGACTTGGGAC 40909 29 100.0 32 ............................. ATGTCAGGCGTCGGGATCGACACGGTGCCCGT 40848 29 100.0 32 ............................. GCGACGGCGACGATCTCCGGCGCCAGCCTGGA 40787 29 100.0 32 ............................. GCCGTCAGCGTTCGCTCCGGGCGCCGCCCACG 40726 29 100.0 32 ............................. TCAGGGTCGCCGATCTCCGGGTCGTCATCGGT 40665 29 100.0 32 ............................. CACGTCGGGCGGACGGGAATCCTTTGACGTGC 40604 29 100.0 32 ............................. AGTCGGTCTGCAGTAAGAACTGCAAGTGGCGT 40543 29 100.0 32 ............................. CAGCGTACGGAAGTAAGACACCGCAGCGCCGC 40482 29 100.0 32 ............................. TTCAGCACGCGGGTGGAGGTGACAATCGCACC 40421 29 100.0 32 ............................. ATTCCACGGTTGCTGTGCGCCGCTCCGATGAC 40360 29 100.0 32 ............................. AGTGACACGCTCACCCTCCGCATGATCAAGAA 40299 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 53 29 99.7 32 GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Left flank : TACGCGAGCAAAGACCGGGCGTGCAGCTCATCAGTTCCCAGCCCACCCGCCAGGGAGGTGCGCAGGCCGGGAGAGAGGTAGTGATCCCACAGGGCCTCCACCGCTGCGGCGGAGTCGAGAAGGTGGCAGATCAGCGGATACCGCGTCGGAAGCCCTCGCGACTTGCCCCACAGGGCGAGGTCAACGTCCAAGGGGTCGTCCATCTCCACTCTCCATGGCCAGGCTGGGGCCGCCGACAGGTCGGCGTCCGTCAGTCGGATTTACGAGAGATCACTGTAGAGACAGCCACCGACATTTCATCTCAAACGAAGAATGTGAAAATTATTCAATTTCCATTAGCCGCATTTGTGAACTTTTGTGGTGTTGGTGGGAATTTGCGATCATATGAGCACCGGGGATGCGTCTCCTGGGGAGGGGTAGGCTGGTTCGCGATGCTTTCGACCACATGTTCGGCCTGCCGAAAACTTCAAGTGCAAATGTGAAACCGCAGGTCGGGAAGT # Right flank : GTTTCGGGCACTCAATCGAACTGTGGGAGTGCCTATGTAGTGAGTCGTTTATCAGACTGCTGGTGTAGAGGTGAGAAGGACTCACGTCAACGAAGAAAGGGTGCGGAATCGTTTGAGCCGGTAGTCAGTAGAGTGGCAATCAGGCATCCAAGCTTGCTACCTAAGCCACTCTGGAGTTGATCATCATGAGCAACCGTCAGGATTGGATGGGAAGCTCGGCTTCGTACCTGACCCCACGTTCCGATGGCCAGGTCGACGCCTGGTCGGACGAGCTCGCCGCGACGGGCAAGACCGGCTCGCAACGTCTCGCTGAGGTCGTGGAACTCGTCCCGCCCGCCCATGTGGCTGAGGCCTTGCGGTTGCCCGATGGTGGTACTGCGGTTGTCCGGCGCAGGGTGATGCTGGTGGATGACCGACCGGTTGAACTCACGGACTCCTACTACCCGTCTTCCCTGGCCATCGGCACCGGGCTTGCCCAGATGGCGAAGATCCGTGGTGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 52514-54372 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGFP01000001.1 Streptosporangium minutum strain M26 scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52514 29 96.6 32 .............C............... AGATCGCGGTCATCGTCCCGTTCCCCGACAAC 52575 29 96.6 32 .............C............... CGGCGGCGACCAGCTCGCGGTACTCCTCGGCA 52636 29 96.6 32 .............C............... TCCCGCTCCATTCGATGACTAGGACAGTGGCG 52697 29 96.6 32 .............C............... CTGTACGACTTCCTCTATTCTGAGACGTCGCG 52758 29 96.6 32 .............C............... GACAGAGAGCCAACCCTTCATCTCCTCAAGCT 52819 29 96.6 32 .............C............... GACACGAGGCGAAACAGCCGGAGCGTCACAGT 52880 29 96.6 32 .............C............... GGCGCGCAGGCAGTCATCGCGGTGGCCCAGCT 52941 29 96.6 32 .............C............... GTCCGCCGTCGAGTACGCCGGTTCGGGTCCGG 53002 29 96.6 32 .............C............... CGCATAGCAGCCCGTTCATGAGGCTCAGGTCG 53063 29 96.6 32 .............C............... GTCCCCGGCGAGGACTACAGCCACATCCCGGT 53124 29 100.0 32 ............................. GCGGAACGTTCACCAACGGAACCGTTATCGGC 53185 29 100.0 32 ............................. GCACTGAAGGAGCACGGCGCCCGCGCCGTCAA 53246 29 100.0 32 ............................. TCCCGCAAGATCCTGACCCTGGCCGCCGTCGT 53307 29 100.0 32 ............................. GAACTCTCTGCGGACGCCGACCCGGTGACGGA 53368 29 100.0 32 ............................. ACCGCATGTAAACGCTGGTACATCGTAGAGAA 53429 29 100.0 32 ............................. ATCCACCGGAACCATCCGGCTCTGCGCATGCC 53490 29 100.0 32 ............................. CCGCCCTACGAGCCGCACGGCCAGTGGCCGAA 53551 29 100.0 32 ............................. GACACGTCCTCGCCCTGGTTCGCGTAGTAGCT 53612 29 100.0 32 ............................. GTGTTCATCGACTACTCCGACCCGGCCGGGGT 53673 29 96.6 32 ........T.................... TCCACGGCACCTACGCAGGTATCGCGATCTAC 53734 29 100.0 32 ............................. AAGATGTCCAGGGGGATCATTGGGTGCATCCG 53795 29 100.0 32 ............................. TTCGTGTTGTCGTCGATGTCGGGGTGTTCGCT 53856 29 100.0 32 ............................. CGTGCTGAGCCACGTTGCTCGGCGCCTTTCGA 53917 29 100.0 32 ............................. CACCTGCACACTTCAGGGGAACACATATACGC 53978 29 100.0 32 ............................. TTCACCAGATGGCGACTGACCACCGGACACCA 54039 29 96.6 32 .....................A....... CCGGATGTGGCCGAGGGGTTGATCGACTTCGT 54100 29 100.0 32 ............................. AGGACCTTGGCGGGGTGGCCGAACATCTGCTT 54161 29 100.0 32 ............................. CAGAGGCAGGGGACGGCGGGGCCGTCGATGCC 54222 29 96.6 32 .............G............... GCTCGCGAGGACTGGACCGAAACAGTCCGGGC 54283 29 96.6 32 .........G................... GTGAACGCGCGGCGGATCGTACGGACAGGCTC 54344 29 96.6 0 .........................A... | ========== ====== ====== ====== ============================= ================================ ================== 31 29 98.4 32 GTCCTCCCCACGCACGTGGGGGTGAGCCG # Left flank : CCAGGCGCTGATCGACCCCAGCGGCGAGAGTCACTCTCCCATCGACCGGAACAGCGATCTCGTGCACCTGTGGGATCCCCAACTGGGTGCACTTCCGGCAGGTGTGAACTACGGATCCGAGACCTTCGACCTTCCCTTGGAGTAGCCGATGGCCTCGATGCTTGTCATCTCGACGACCGCGATCCCCGACCACGTCGGAGGAGCGTTGTCCCGTTGGTTGATCGAACCCTGCCCAGGACTTTTCGTCGGCACCGTGTCGGCCCGGGTCCGCGACGAGCTCTGGGCAGCGGTCAGCGCGAGTGTGGGAGACGGCCTGGCGGTCCTCATCCACCCGGCTGACACGGAGCAGGGATTCGCGATGCGCACAGCAGGGCAGCGCCGCCGCCATGTGATCGACTTCGACGGCCTACAGTTGATCAGGTTCGCCGCTGGCGAGTTGAACGACGCGTCCGGCTCGTTGAAAACTTCAAGTGCGATTGTGAAGTAGCAGGTCAAGAAGT # Right flank : GTCCCAGAGGCGCTCTCGTTGCGGTGGCCGCGCCTTCCCCGTCGCTGGGGGCACTTACAGCCCAGGCCATCTCATTCGATGTCCAGCCATGGAGCGTCTTGAGAGCCCAAGAGATGGGCGAAGGGTTCGAGTCCCCCCTCGGACACGTTCGATTCGCCCATGAGGTCCTGGTCAGACGTAGAGCTGACCAAGACTCTTCGTGTGCTGGGGTGGTAGGTCATCGGTGATGGTGAAGCCCTGCAGGATGTAGTCGTCGCCGTCCTCCTAGACGGTTGGCGAGTCACCGTCGGGGCTGTCGGGATCCTTGCCGAGGAACCGGAGTGCCATGAGCCCGGCATGGCGAGGAGTGCGAACCGATCTCCAAAGCCCAGCAGGGCTAGGCACCAGATCGGGGATCGTCCTCAAGAACTCGTCCGCGCAAAGCCTCCAGTTCCCGCCCCAGAGCGCCCGACCCGACGAGCATCAGGGCGTGTACCGCGCTCACCTCTCGGGCGGATGCC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGAGCCG # Alternate repeat : GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCCCGTGGGGGTGAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //