Array 1 55603-56294 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAOJ010000007.1 Acetobacter tropicalis strain DmPark25_167 NODE_7_length_95022_cov_36.492718, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 55603 32 100.0 35 ................................ TTATGAAGGAACAGCAGACAGCGGAAGGCATAATG 55670 32 100.0 34 ................................ GTGCTATCAATAACGATACTGGCGAAACAACATA 55736 32 100.0 34 ................................ TTTAGTTTTTGGGTTTATAATTTCGCTTTCTTTA 55802 32 100.0 33 ................................ TCTAGCCTCTGATGGTAAAGCCATTATTGAAAG 55867 32 100.0 34 ................................ GGGCATTTCTTTGGTTGCCGGAACAAAAAATGCC 55933 32 100.0 33 ................................ GCTTTCTACGGCCCACAAAATCGGCAGGATTTG 55998 32 100.0 34 ................................ CCCAGAAAAAGGTCTATGCTGGCTATGGAAGGGT 56064 32 100.0 35 ................................ TCCGCGTGCCTTGGTGAGTACTGCGCGAGCTTCTG 56131 32 100.0 36 ................................ TGGAGTTGCAATGGGACCAGGTTGATTTTGAACGTA 56199 32 100.0 33 ................................ GTTGTCGATGCATCCGAGTGCGATATTAACTGC 56264 31 81.2 0 ......T...A......-C.....G......T | ========== ====== ====== ====== ================================ ==================================== ================== 11 32 98.3 34 GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Left flank : GCCAGATTCTGGTGGCCACCCGTGGGCGCGAACAGACACGCCAAAGCCTGCGCGTGGCGGCGGATGTCTGGTGGGTGGAAAGCCACTGGGTTATTCTGGAAATGGTAAAACACAATATAGGCTGGGCATTTGTCTCAGACCATGTGCTGGCGGCCTCTCCCACAGCGCCGGATATTGTGGCCCCCAACCTCCAGTTCGATGCCGGAGAACGCCTGACCCCTCTTGTCACCGTGTGGCACAAGAAGCATCCTCATGGTCCTGCCGCCCAATGGCTCCGCAACCGCCTGCGCCAAGGCGGTATTCCCGGTGTTACGCATCCGTCGCGCGAACCCTGATCACCCATCAAAATCCCGGCAGGGTCGCGCACGCGTCAACTCATTATAAAATAAGAATTTTTTCAAACACGCTGATCCCAAAGCGTTCAGCAGCAGCACTCGTAACCGCCAGTTCGCGCAAAAAGCGCATTCCGCCCAGCCCCAGACAGGTGCTAAACTTACAGC # Right flank : TATGGGGGGAGAGCACGAATTGGTCATGTTCTCTGGCGGGCCACATGCAGGCGCGTTGGCGTAAGCCGGGAGGAGAGAACTAAAGCTCTTACGGGCTTCAGGGCATCTATGCGCAAATTGGAGGTAAGGATTGCTTAATAAGCAATGGTGACAGGTCATTCTGAATGATTACATTTTATTAAGAATAAGTGATACCTGAGGGGAAGGGAGGTCAGTGGTTCTTTACGCGCACTCTCTCCCTGCCCCTGCAGACAAGGCGCGATGGGAACCTTTGCGAGAGCATCTTGAGTGTGTCGCGCAAAGAGGGGCGCTTTTTGCACAGCCATTCGGACTGGCCATGCTCGCGCGGGCTGCGGGGCTTTTGCATGATATTGGTAAAGCATCTGCGGCGTATCAGGCTTATATCAGTTCAGAAGTCAGCCAGAAGGGACCAGATCACAGCACGGCGGGGGCACGTGAGGCTGTAACGTTATATGGCCAGCAACTGGGGCGTTTACTCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 10882-12313 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAOJ010000086.1 Acetobacter tropicalis strain DmPark25_167 NODE_89_length_19279_cov_37.635509, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 10882 32 100.0 34 ................................ TAACATTACTCAACATTTGCAAAATGGTTAAACG 10948 32 100.0 33 ................................ ATCAAATCCAGCAATTTCAACGCCTTTTTTGAG 11013 32 100.0 35 ................................ CATTGCAATGCGGCGTGCATCAAATTCCTCATAGG 11080 32 100.0 35 ................................ GCTCATTGCCGAGGCAAATAGCCTCATGCCGCGTG 11147 32 100.0 35 ................................ CCTGCCACAATCAGACTGAGGTGCCTGAGTATGCG 11214 32 100.0 34 ................................ ACTTGTGTTCGGATACACAATTGATAGGGCCAAG 11280 32 100.0 36 ................................ ATCTGTTTACTTGCCCACAGAGTTGAGGTCTGCACG 11348 32 100.0 35 ................................ TTGAAAACGTGCCGACATATGCTGAAAGATCACCA 11415 32 100.0 34 ................................ ATTGCCCTAGATATTTCATCTGTCAAAGTATAAG 11481 32 100.0 35 ................................ TGCAAAAGAGTTTGGAAAAGAAGTGCGTTGGTGAG 11548 32 100.0 34 ................................ GGCGGCGGCTATTTGTGGCGTGGATAGTAACGGG 11614 32 100.0 34 ................................ TGCCAAAGTCTATCGTGATTTAGAATTTGGCGAG 11680 32 100.0 38 ................................ GAGGTTGTTACTGGCAGACGTGCAGACATTCGTGAGTG 11750 32 100.0 34 ................................ GAGCGCCATTATAATTATACCCGAAAATATTGAG 11816 32 100.0 35 ................................ GATTGATTACGTCAAAGAAAGCGGTTTTACGAATG 11883 32 100.0 35 ................................ TTGCCGAAGATATTAGCTGAAAGACCAGTATCTTG 11950 32 100.0 34 ................................ AGCACCTCACGTTGGGCGAGCTGTGCGGGCTAAG 12016 32 100.0 34 ................................ ATTTGTCAGATCACCAATGATGAGCTTGCCTCGT 12082 32 96.9 35 .............T.................. ACCGCCCTGCCTGGTTGGTTCCTAGTGGGTGCCGA 12149 32 100.0 34 ................................ CCGCTGCGCTGGCGTCTGCTGCACTGGCGGGACG 12215 32 100.0 35 ................................ GCGTCCTGACCCATGATGGTGAACCATGGTTTGTG 12282 32 93.8 0 ........T..........T............ | ========== ====== ====== ====== ================================ ====================================== ================== 22 32 99.6 35 GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Left flank : CAGCCTGTGGCAGGTTGGCAGGGGGCACAAGGTGCAGAGTATTGCCACCCGCGCCGAGCACCAGCAGGACCGCATAACACAGCAGGCAGATACGCCAGTTGACGAGAGGCTCCCGCATAATGTCAGTTGATGGCGGAAAGGATGAGGCGGATGCAGTATATAATCCGGGTGGTGTCGTCATTATAGTATGCTACCACCATGAAATCATGCTGTGTGCGACAAAATAGTGTGGCCCAGGTAGGAACGACCATGGCCACCTTATAGCTGACCGCTCCCTATTCCCTGCACGTAGCTATACTGCCCACCTATTTGCGGCAGACCAGCGCGAACCCCAATCACCCCTTAAAACCCCGCCAGATTCGCGCAAGATATAACCCTTTCAAACCAAAAGATTTTCTTCCAAACCGCCAGATGGAAGCGTAACAATTCCCCGCTTTCCACACAGGTTCGCGCACACCCGCACATTCCCCCAGTCCTTTTCTGCTGCTATGCTCCCACAG # Right flank : CTGCCTGTTCATAAGCTGTTTCGCTCCGCGTTGTGCGGATCGGTAGCCGGGGGAGGGCGAGTCTTATAGTCCCGTTGTGGTGGCGGGTGCTTTCTCTCCCCTGTGGCCGTCTTCTGTATTCAGGAAAACACGATTGTGCGGCGGCCGTTTAGCATAACACGTTGTTCCACATGCAGTTTTACCGCGCGGGCCAGAACTTGCGATTCAACGCCCCGGCCTGTGGCAATGTAGTCCTCGGGGGAGAGGTTGTGGGTGACGCGGGCGGTTTCCTGCTCAATGATAGGCCCTTCATCCAGATCAGCCGTTACGTAATGGGCCGTGGCGCCAATCAGCTTTACCCCGCGCGCGTAAGCCTGATGGTAAGGGCGTGCGCCCTTGAAGGAAGGCAGGAAGGAGTGGTGGATGTTGATGATCTGTCCGCTCAATTCAGCGGAAAGCCGGTCAGAGAGCACCTGCATGTATCGGGCCAGAACAATCAGGTAGGCCCCTGTTTCCTTCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //