Array 1 165547-166063 **** Predicted by CRISPRDetect 2.4 *** >NZ_NROP01000006.1 Cronobacter dublinensis strain cro2845B2 contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 165547 29 100.0 32 ............................. AAGAACTGCGTGCGTTGGATCAGGATGACATC 165608 29 100.0 32 ............................. CGTAATTCGCGCGCTGGGTGACTCCAGGCGCG 165669 29 100.0 32 ............................. CCCCTCCAGGTGCTGCGGCAATTCGTCAGTGA 165730 29 100.0 32 ............................. GCGCCGGAGGTTCCGGCGGCACAATACACCGT 165791 29 100.0 32 ............................. TAACGGGGCTGACGTCGTAGAGCCGCCCGACT 165852 29 100.0 32 ............................. TGCGTCAGGAGCTTGAGACCGAATTAGCAATC 165913 29 100.0 32 ............................. TATTTCGCCTTGCACTAACTCCCTGTATTCGT 165974 29 100.0 32 ............................. GCTCAACCGGCGCGGGCGGTGCTTCCACGAAT 166035 29 93.1 0 ..........................A.T | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GACGAAAGCTTTAAATGGATGATGGCGCACAACATCGCCTTTATTGTCGTCAATATCAACATCAACTATCGCCGTCCTGCGGTGCTTGGCGACATGCTGACCATCACCAGCGAGATGAAACAGCTCAATGGCAGAAGCGGGGTGCTGAGCCAGGTGATTACGCTTGGACCCGAAGACGAGGTGGTCGCCGACGCACTCATCACGTTCGTGTGTGTCGATCTTAAAACCCAGAAAGCGCTGCCGATTGAAGGCGAACTGCGCGAAAAACTGGAAAATATCACAGGGTAAATTCTGCAATCACGCTGCCTGTGCGTGTAGTCATGGACTTCCACTTACCGAAAGCGAACAATCCGGTAGATGTTACCGGCCCGAAAGCACGCTGAAAAAAGCTTTTAAAATCAACAGGGCAGCCGCTCTTTAACAAGATGGGTTGTGAAGTAAATGTTGGTAGAATGTTGGGGTCGATAAAAGTTTAAAGAAAACAACAGGTTGTTTTTAGA # Right flank : TTACTCATTCGCCGCGGCGCAAAAACTTACCTCTGCCAACCCCAGCCCGAATATCCAGCTCAACCACCCGACAAAGCAAACATTCGCAACCCCTCCCAAACCCCATATTCTTCAGCGGCGTTTATACTTCAAAGCCAACATGAAATTTCGCAACACTGCGCAACGAAGGAGAGGCTATGCGGGTACACCATCTTAACTGCGGTTGTATGTGTCCTTTTGGCGGCGCGCTGTATGACGGCTTCAGCAAAGGGTTGCACGCGCATCTGATTTGCCACTGTCTGCTGATTGAAACCCAAAATAACGGACTCGTGCTGGTGGATACCGGCTTCGGCTGCGACGATATGCGCCATCCTGGCCGTCGTTTGCCCCTCTTTTTCCGGGCGCTAAATAACATTCAGTACCGCGAATCATTAACGGCGCTGCATCATATTAAGGCGCTCGGTTTTAAGCCGGAGGATGTACGGCACATTTTACTGACGCATCTGGATTTCGATCATGCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 192397-195720 **** Predicted by CRISPRDetect 2.4 *** >NZ_NROP01000006.1 Cronobacter dublinensis strain cro2845B2 contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 192397 29 100.0 32 ............................. GACGCGCCGCAACTGGCTCGGGCCGGGAACCG 192458 29 96.6 32 ............................T CATATTTGATTGGGTGGGCTGACTACTATCAC 192519 29 100.0 32 ............................. ATCACCGAAACCTATCTCAACGGGCGCGGCAC 192580 29 100.0 32 ............................. GCCTCGGTTATTTCTGCTATGCAGGAGGAAGG 192641 29 100.0 32 ............................. TTGACCCGAAACTGGTGTCGAGCTCGGAGGCG 192702 29 100.0 32 ............................. GCAGTTAGAGCCGTGGGCACCATGTCCGCGGT 192763 29 100.0 32 ............................. GATTTTGGTGCGGCCCGCGCGAGGAGCGGAAA 192824 29 100.0 32 ............................. CAGCTGGTGGCCGCGGGCAAATCACAGACGCA 192885 29 100.0 32 ............................. CGCCTTTAGTGTTCGGGCTGCACTGGTCTATC 192946 29 100.0 32 ............................. AAAACGGCGGCTTTGGATCAGCTGGGGATGAA 193007 29 100.0 32 ............................. GTCTAGCGGATAATTGTTTTCATCAATTTCGG 193068 29 100.0 32 ............................. GTGTTTACCACGTTAGCCAGTGGCAAGAAAAT 193129 29 100.0 32 ............................. TGACTTTCCTTTTTGGGGGTGAGCCAGCGCTC 193190 29 100.0 32 ............................. GACAGCTACGGAGATATTGTTATACCCGGTGC 193251 29 100.0 32 ............................. GAGTAACGCCGACTATTTTTATTTTCAGGCGG 193312 29 100.0 32 ............................. AAAAAAACCGCCTATTAGCACTGATGCGTTAA 193373 29 100.0 32 ............................. TGTCCATTCTGTTTAAGCCCCGCATTAGCGGG 193434 29 100.0 32 ............................. TCGCCGACGACGAGAAGTTGCTTGCTCACACC 193495 29 100.0 32 ............................. TCGCTGCTTCGGTAACAAGCCCGAGAGCGTCA 193556 29 100.0 32 ............................. ATGGCCGCGTCTGGCTATCTCGGCAGCTTGAT 193617 29 100.0 32 ............................. AACAACCATCAATCCAACGATCCGCGATTTAC 193678 29 100.0 32 ............................. ATCCTGACCGAGCGTAACGAGCCTGTTCAACT 193739 29 100.0 32 ............................. CATTCGTCGGAACGGTCAGGCGATTCTCGCGG 193800 29 100.0 32 ............................. ATGGGCAGCGACGCAATAAAAATTATATCGCT 193861 29 100.0 32 ............................. CGGGCAGACCCGCGGCGACAACGTGTTTTACA 193922 29 96.6 32 ........T.................... GCGAATTTGCTAACGCAAGAGGGCGCCGAGGG 193983 29 100.0 32 ............................. TACTTCGCATAATCGAACGTGCCGCCGGCAAT 194044 29 100.0 32 ............................. GGCAAGGCGAAACGCGCTGACGCTGTATTTAA 194105 29 100.0 32 ............................. GCCGCTCCCGCGTCGTCGTCGGCTGGAGCCTC 194166 29 100.0 32 ............................. AACTGGGTAATTTTCGCAGAGTTTTAGAGGGC 194227 29 100.0 33 ............................. GCTCAATATTACGCAATATTAACGGCGGCTGGC 194289 29 100.0 32 ............................. CGCTTATATCAGTCTTGCAACCCTTTCCCGGT 194350 29 100.0 32 ............................. GCCCCGCATCAACCGAGACAGACACGGAGCCT 194411 29 100.0 32 ............................. CTATCGATCGTTTTAACCATTCACTGCTTGTC 194472 29 100.0 32 ............................. GAGGGTGCTCGCCTGGACCAGCAAGACCGGCA 194533 29 100.0 32 ............................. CGTCGTTGAATATCCGGGAGGCTAATCCCGAC 194594 29 100.0 32 ............................. ACCTGGCGACCCCGGCCCGGCTCGCTACTGCT 194655 29 100.0 32 ............................. TGGATCACTCACTCACCCCCTGTCTCAAGATT 194716 29 100.0 32 ............................. GTGAAAAGTGCTTTATGATCGGTGTTATCTGT 194777 29 96.6 32 ............................C CGTGCAGCTTCGCGACGGGGTAGCCGCGCTCA 194838 29 100.0 32 ............................. CACGCCCGCCGGCACGCGGAATTTTTTTAAAA 194899 29 100.0 32 ............................. TTATTAATTTCAGTGCCGTACAGTCGCGCCAG 194960 29 100.0 32 ............................. CGCCACCAGCGCCGCAATTTTTTCGCGTATTG 195021 29 100.0 32 ............................. TCGGTCGCCGAGCAGGAGGCATTTTTTATTAA 195082 29 100.0 32 ............................. ATTTATTCCGCCAAATATTTGGGGGGCGGTGT 195143 29 96.6 32 .................A........... AGCGAGCAAACCCGCAACCTCAATAACAGCAT 195204 29 100.0 32 ............................. ATCGACACGCTCGGGCAGCGCGCCGGGAATAT 195265 29 100.0 32 ............................. GTCAACGGCCACCAGCGGCTTTGGAGACGTCA 195326 29 100.0 32 ............................. GGTTGGTTTGTGCCAGCAGCTCGACGATTTTG 195387 29 100.0 32 ............................. GCCATCGGCGCTGACGACTGGTCAAAAGAGCC 195448 29 100.0 32 ............................. ATTATCTACAACCGTTATATGCCGGGCAAAAC 195509 29 100.0 32 ............................. AATGTGGCTCTCCTCGCCGCTGGCGTGGAATA 195570 29 96.6 32 ............................A GTTACCGGAACAGCAAGACCCGGCTTGGGTCT 195631 29 96.6 32 ............................T GATTTTGCAGGCGCCACTGAGATCCTTAACTG 195692 29 96.6 0 .......T..................... | ========== ====== ====== ====== ============================= ================================= ================== 55 29 99.6 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : GAGGTGCTGGCGGCGGGCGACATCGAACCGCCGCAACCCGCGGCGGATATGCTGCCGCCCGCTATTCCACTGGCGGATTCGCTCGCCGAAGCGGGCTTCAGGAGCCGTTAATGAGCATGCTGATGGTTGTCACCGAAAACGTGCCGCCGAGACTGCGCGGGCGGCTCGCCATTTGGCTGCTTGAACTGCGCGCCGGGGTTTATGTTGGCGACGTCTCGAAGCGGGTACGTGAAATGATCTGGCATCAGATAACCGAGCTCGCGGAAGAGGGCAATGTCGTGATGGCCTGGGCTACGAATAATGAATCCGGCTTCGATTTCCAGACGTATGGCGTTAACCGACGCATTCCGGTGGATTTAGACGGCCTGCGCCTTGTCTCATTTTTACCCCTTCAGAATCAGTAGGTTAACTGCTCTTTAAAAATGTGGAGATGTAATAAAAAGGTTGGTGGATTGTTGGATGTGAAAAATTTCCTTATAGAACAGTTGTATAGCTTTAGA # Right flank : GGCCATGCATGCATTTATGATGGGCAAATTTGGATAAGCGATTTTCGACAAAAATCGCTCTACCCCGGAGAGAGTTATCGAAAAGCAAAACCAGCTTTTAAACTATACAGGCATTACTGAGATGAATAAGAAAAACCTTTTACTGGCTAGTCCAGCGTTATATTGTTTTTGCGTGTTAGCCGGGGATGACACTACCGGGCAACAGCCGCAACAGGCCGCGCTCAAATTCAACCAGTGGTATATAAAACACTTCAACGATTCGGATGATAATCTGCTTAACAGTAAAGAAATCGAAATCTACGTGGCGAAAGAGACGCTGGAAACGTTACGACACGCGAGAAATAACGACGATGAATTTTATGATGCCGACTTTTTTATAAAAGCGCAGGACATCATGCCTGACTGGCCAACCCATACGGTAGTAACCGGCGCAGAATACGATCCCGTTTGTACTCAGGTGTACGTCTCATTCGGCCAGCATCAGACGCATGGCGTGATTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //