Array 1 20544-22523 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBHY01000007.1 Lactobacillus acidophilus strain UBLA-34 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 20544 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 20605 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 20666 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 20727 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 20788 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 20849 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 20910 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 20971 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 21032 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 21093 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 21154 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 21215 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 21276 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 21337 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 21398 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 21459 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 21521 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 21582 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21643 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21704 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 21765 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 21826 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 21887 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 21948 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 22009 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 22070 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 22131 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 22192 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 22253 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 22314 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 22375 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 22436 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 22497 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //