Array 1 786708-784997 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIPP010000001.1 Acinetobacter guillouiae strain CC160 Ga0451197_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 786707 28 96.4 32 ........T................... GATAGCACTGGTCATTTCCCACTCAAGAACAA 786647 28 100.0 32 ............................ TTAAGATACGAGTTTTAATTGACGTTGATTGA 786587 28 100.0 33 ............................ ACAATCGCATTGCTTGGCACTGCTTATTTAACC 786526 28 100.0 32 ............................ TAAAAGGGTCTCTCAATATAGATGAGTTGAAT 786466 28 100.0 32 ............................ AGCTTCAGGGCTTTCATAATTCGCGATCATCA 786406 28 100.0 32 ............................ AAATCTTTTAAGCCACTCAGTTTTGACGAAAT 786346 28 100.0 32 ............................ TCAGGCGTAAAAAGATCGAAACCGAAGTTTTC 786286 28 100.0 32 ............................ TAAGTCAAAAATGCTTTGGGCATTTTTGAGAG 786226 28 100.0 32 ............................ TCCCATTGAACAGGCACATTTTGAGGGGTTGT 786166 28 100.0 32 ............................ TACAGAAGATCTAACCCCATGTTTTTCACCTT 786106 28 100.0 32 ............................ ATCACCACCCATAATCCAACCATGATAGGATT 786046 28 100.0 32 ............................ TACAGAAGATCTAACCCCATGTTTTTCACCTT 785986 28 100.0 32 ............................ ATCACCACCCATAATCCAACCATGATAGGATT 785926 28 100.0 32 ............................ TTAAGGCTATTTCAGGCGTTCATGATGTTTAT 785866 28 100.0 32 ............................ TATGATCCGAAAAGTTCGGCTAGGGGCGCTGG 785806 28 100.0 33 ............................ CTAAGTTCATTCCAAAAGTTAAAAATCGTAAAT 785745 28 100.0 32 ............................ ACTTGGTGATAATCATCCTAAGTGGTTGTTTT 785685 28 100.0 32 ............................ TCTATCAATTTGGCAAAGGCGTTAACGATATT 785625 28 100.0 32 ............................ TCTATCAATTTGGCAAAGGCGTTAACGATATT 785565 28 100.0 32 ............................ TCTCTTCAATGGCCAATGGCTGAACTTCATTT 785505 28 100.0 32 ............................ TCTCTTCAATGGCCAATGGCTGAACTTCATTT 785445 28 100.0 32 ............................ TCTATCAATTTGGCAAAGGCGTTAACGATATT 785385 28 100.0 33 ............................ AAAGGAATGATAATCTTCAAACTGCACTTGAAC 785324 28 100.0 32 ............................ AATGGCATCAAGAAGATAAACAACATCAAACG 785264 28 100.0 32 ............................ ATTTGCCGAAGAATATTCTTAATTATTACAGC 785204 28 100.0 32 ............................ AATGATTTAAACCGTTCTGCGCGTACCATGCC 785144 28 100.0 32 ............................ CTTTCATGAAGCAATTTCATGCGCCAAATGAT 785084 28 100.0 32 ............................ TTCCCCGATCATAGACATTAAATTCTGAATAT 785024 28 85.7 0 .................T..T...AC.. | ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.4 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : ACGATGCAAAAACCGCATACGATTGTAAATCTAGCAAGCAATTATCAAGTCAATGATAAGCTCACTGTACGTGGTGGCTTTACTAATTTACTTGATAAAAAATTGTCAAATGGTGCAGATGCATACTTCGTTGAGCGTCAAAAAGTATTTGTAGGCGCAACCTTTAAATTTTAATCAATTATATTGAAATGAAGATTGACTTCACTTCAATTAATAAATCATGCGTTAGAAAAACCATCTTCGGATGGTTTTTTGTTATGTATTTTTATTAGGAAGTGATTTTATTTCGATGAATCAAGTGCTGTATATAAAATAGTAAAGAATGATCTTCAGAATTTAGGAATTTTTTGTTCGCACCAAAAATTTCCCCCAATATTTTTTTGATAATTTTATAGTTTAATAAAATCATTAGGTTATATGTTTTTTAAAAAACTTTGGGTATTTTATGGTTTTTATATTTAACTTGCTGTTATCAGAATGTTTTTTGATTTAAAATTATA # Right flank : TCAACGGAAAAACAATAGATGAGGTATACCAGCAGAGGAGTTAATTTTAGTTATATTGATAACATTTGAATTTGTAGAGAAAATCACCTTTAAGCTAACTTTCTCTACATCTAACTCATTGGTTTATTTAAAGCTAAATCAATAAAGATCTTTCATAAATCAAAAAATGATTATATGGCGTAAATCATATTGCTATTGAAAGTCCCTTCTCCCACTGGGAGAAGGCTAGGATGAGAGGGATTTTATCTCGATCTATGTTTTAAAATGGGCTTATGAAAGAAGTCTAATGTTTAGCTAATTATAAATAGGTTTTAGAATTACCAATCGTATTTTAACCCCACTCTAAAATTAATCGGTGCACCGTAGTAGCTATTACCTGTTGTTAAATAATACTTTTTATCAAAAAGATTATTTATATTGAGATTGGCTGTTAATTTATTGTTTATTTTATAACGTGCCATTAAATCAACAACACTGTATTCACTCTGGGTAAATTTCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 87870-83399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIPP010000002.1 Acinetobacter guillouiae strain CC160 Ga0451197_02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87869 28 100.0 32 ............................ AATCATTTTCAAAATGACAGCGACAATATCTC 87809 28 100.0 32 ............................ ATGAAAACTACTGATCACGATTCTATCTTTAA 87749 28 100.0 32 ............................ GTTTATCAAACTCGTAGAAATCAATTTCGAAA 87689 28 96.4 32 ...T........................ ATTTTCGGGAGTTAAGTCCACACTAGAGATGG 87629 28 100.0 32 ............................ TTTGGGTGGTTTTGCTCGTCCCTTTTTTTCAT 87569 28 100.0 32 ............................ GATAGTTTTTATATGATTTATTAGATGAATCT 87509 28 100.0 32 ............................ ACAGCGACACCACCAAGAACCGCTGATACAAG 87449 28 100.0 32 ............................ TCTACAAAATAAGGTGTGTTATGTACGCAAGC 87389 28 100.0 32 ............................ TGAAGAACTAGCGTCTGCTGCAAAGCAAAAAC 87329 28 100.0 32 ............................ CTGTCTATTTTTTTCTAAAACAGCACCCACAG 87269 28 100.0 32 ............................ TTTTAAATCCATCCTGAAGTCAAAAGAAGAGT 87209 28 100.0 32 ............................ TATCAACCCATGTCAAAACAAGGTCATTTTCA 87149 28 100.0 32 ............................ AGTTAAAGCAGCAGCTTGAAAGATCTGATTTA 87089 28 100.0 32 ............................ ATGAAGCACAATATTTTTAAGCAACCCTTCAG 87029 28 100.0 32 ............................ TATAAGTTGTCTTAATTGATTTGAGGTTCTCG 86969 28 100.0 32 ............................ ATGCCACCACCAACAGCCTCTTCAAAGCCATT 86909 28 100.0 32 ............................ AAAATGATTGAAAATAACCCAGATGCAGCAAG 86849 28 100.0 32 ............................ ACTCAGCGTCTTTACGCCCATAGGTCTTTCCA 86789 28 100.0 32 ............................ TGGTACTGATTCACCTTGATGCAGTTTGTTAT 86729 28 100.0 33 ............................ TCATAACTATGGGGGATTTGTTTATGACTTTTT 86668 28 100.0 32 ............................ ATATTTGTATCTCCTATTTGATATGCACACTT 86608 28 100.0 32 ............................ AAACGTTCTAAACTGTGCTGCCATAGCCCAGT 86548 28 100.0 32 ............................ TACTTCATAATTTAAAAATATTCTTGAACTAA 86488 28 100.0 32 ............................ ATTTGATAATCCTTTTAAAATCACTTAATTCT 86428 28 100.0 32 ............................ GTTTGCTAATGCAGTTCTTCGTTTAGAAGCTC 86368 28 100.0 31 ............................ ATTAAACCAATGGTGATTATCAAGACTGCGA 86309 28 100.0 32 ............................ TTGCGGCGCGTACTGTGCCTGTGGCGTTCCTT 86249 28 100.0 32 ............................ CGTCGTTATTGTCAATGAACAACGTACAGCGC 86189 28 100.0 32 ............................ AGTTACCACATACTGATCTTTCAAAATATTAA 86129 28 100.0 32 ............................ AGCGCGGCGCATTTGTACTAATAGCGGTATTA 86069 28 100.0 33 ............................ ATTCAGCGCAGGCTTTAACTTAGCGTAATACTT 86008 28 100.0 32 ............................ TCAATACGAAAATCAGCTTTCCACTTCCGCTC 85948 28 100.0 32 ............................ ATTGATCTGAACGTCACGCAATAACCCCATAT 85888 28 100.0 32 ............................ TGCAGTCTGGCTAAAACCTGAAAATATTGAGT 85828 28 100.0 32 ............................ ATGTGTATTTATCCTTGGTATCGTTTTTATTA 85768 28 100.0 32 ............................ AGCGACAACTGGAGTGGTCAGTAATTCAAAAC 85708 28 100.0 32 ............................ CATTAGCGCGCCTCTTGTTTATAGGTATGTGG 85648 28 100.0 32 ............................ TTAATTACGACGTCACCAGTTAACTGACCTTC 85588 28 96.4 32 ...T........................ AGTCTGTGAATGTCCATTTACAATTTGTGTAA 85528 28 100.0 32 ............................ ACCAGAACTTAATTTGCCCCAGTTCATTGCAA 85468 28 100.0 32 ............................ AATACCCTTGCCTTTACCACCAGAACTTAATT 85408 28 100.0 32 ............................ TGCTTCCACAAGTCGATCATTCGGACTTAAAT 85348 28 100.0 32 ............................ AGTAAATGACCTAAATAATGCTCATAAGGTTG 85288 28 100.0 32 ............................ TAAATCAAAGTCATCACAGGCAATATAAGAAT 85228 28 100.0 32 ............................ AAAACCAGAAACCAATACCGAACAGAATGCTG 85168 28 100.0 32 ............................ TAGTAATTGTGGGTAGACTCGCATCGATGCAA 85108 28 100.0 32 ............................ ATTGTTTGATAGTTCAGTAATTTCGGATGGTT 85048 28 100.0 32 ............................ ATCGATACAGTTAAGATCCTGAGAGACAAAGA 84988 28 100.0 32 ............................ TGTCTGCAATCTGATTGACAATAGCGTCACTA 84928 28 100.0 32 ............................ AGTAGAAGTAAGCACAACAACATCACCGGGTA 84868 28 100.0 33 ............................ CGATCAGATCCTTTCAGGTTATGTAATCAATTT 84807 28 100.0 32 ............................ GATGGCGCTTTCAGCATTACCACCCATTTGGC 84747 28 100.0 32 ............................ AAAACCAGAAACCAATACCGAACAGAATGCTG 84687 28 100.0 32 ............................ TAGTAATTGTGGGTAGACTCGCATCGATGCAA 84627 28 100.0 32 ............................ CAATAATCAACAGACTTTTGCCAAGCGATAAA 84567 28 100.0 32 ............................ AATCTTTGTTTAAATTAGACAATGAATCTTGA 84507 28 100.0 32 ............................ AAACGTGCCTATTGTTCATTGTGTAATATTAT 84447 28 100.0 32 ............................ ATAATAGACATGTACGCTGCGATAAGTAAAAT 84387 28 100.0 32 ............................ GACTTATAAATATTTGCTATCAAATTATTCAA 84327 28 100.0 33 ............................ TATAATTACAGTCAAAGTGTGTCCAATTAATAC 84266 28 100.0 32 ............................ ATCAATACTCGATCGGGTTTTACTGGTGTTGG 84206 28 100.0 32 ............................ AAACTAAAGGTTTCCACTCGGAATTTGTTTCT 84146 28 100.0 33 ............................ AATAACAGCTTTTGTGAGAAAAGCCACTCCACC 84085 28 96.4 32 ..........A................. TAGTGAGTCTTTCACAATGGATAACATGCAGA 84025 28 96.4 32 ..........A................. TATATAATCTTCAGCTTTCTTGGCTTTTTCAA 83965 28 100.0 32 ............................ GAAAAGATTGTATTAGAGAAGCGCAGTCAAAT 83905 28 92.9 32 ...........AG............... AAGGAAAATGGTAAAAAACTCGATGGTATTAA 83845 28 92.9 32 ...........AG............... TAAGATACCAATAACATCGGCAGGTAAATTTC 83785 28 92.9 32 ...........AG............... GAAGGGTAAATATATGAATTTTTCAAGTGATG 83725 28 96.4 32 ..........A................. AGGCTTAAGCTTTGGCTTGGTGAGTGGTTTGC 83665 28 100.0 32 ............................ TAAAGCTAAAGCAACTCATGATAAAGCTGCTC 83605 28 92.9 32 ...........AG............... TTGAAGCCATAAAAATTGAGCAATTGTCATAT 83545 28 89.3 32 ...........AGC.............. AATGTCATAATTATCTACTGGTGAAAATACAT 83485 28 96.4 32 ..........A................. ATCAAAATTGACTCGAATCATTGTAGAACAAG 83425 27 89.3 0 ..........A............T-... | ========== ====== ====== ====== ============================ ================================= ================== 75 28 99.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GATATACCAAAGTGGCTTGAGCGTTTGGTTGATTATGTGCATATCAGTTCTATTAAAGAAGTGCCTGAAAGTAAAATTACTGGTTATGCAATTTATAAACGTAAACAAGTTAAAACCAACGCTGAGCGTTTGGCACGCCATCGAGTGAAAAGAGGGGATATCGGCTTTGACGAAGCATTGAATCGTTATCGCCAAGTGGTGACAACAACTGATTTACCTTATGTTCAGATGCTAAGTTTAAGTACATCGGATGAACAAAATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAGATCACTGAAAAATCTGAAACTCAGGTTTTTAGTACATATGGGTTAAGTTCTGTGTCTACAGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGTTTAATAAAATCAATAAGTTATGATTGTGGGTTAAAACTTTGGTCTTTTATAGGTTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTATA # Right flank : TAAGCCAACACAACACAAATATTAATATGTTAACTAATTCACATTTTTATGAGAAAAAATATTTATATGATTTTGAACAGTAAAAATTTGAATATCATATAGACTGTTTTGAAAAATTCATTCCTTAAACTCATATATAAATACCATGATCGGGCATCTTAACAGCGTTACTTGGCAAACGCTGGTCAGCGAAAATACAGAATTGAAGTGCAACATCAATCATTAAAACAGTGACTAAAGCATGACTATGCCTTGTTTACTGGGCTTTACGGAGTCATAAAGGTCAGTTTTTGAATTACTGCAGTTAGCCTAAATTTCTAAATATACATGCTAAATTGGAACAAGGTCGATGAGATCGATTTACATAAAAGCATGACCTAAATGCATCAATTTAATTTTAAATTGATGCTGAAATAACGTGAATTTCAATTTTTTATGTAAAATTTACAAAAAAAAATTCTTTAAATAAAACTGAAATATGAATTTAATAATTATTTAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //