Array 1 24537-24142 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABRVG010000055.1 Klebsiella variicola strain CRN 15 S15_contig_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 24536 29 100.0 32 ............................. CTGGCCTTTTTGATAGTGCAACTCAGGTTTAA 24475 29 100.0 32 ............................. AATGCTGCATCCGGTGGTTGCGCGAAAAAGAC 24414 29 100.0 32 ............................. TAACCATGAATCGCAAGGTCACCACCAGGACC 24353 29 100.0 32 ............................. TCCGGGCAGGTTACAATGCGCATGGGTGCTAA 24292 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 24231 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 24170 28 79.3 0 ...........AT..-.....C...G..C | T [24157] ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CCCGCGCCAGCGGGGATAAACCGACTGTGAGGCTCTATGGCGATATCAGGGTGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGGTATGCGATGTTCGTCAATACTCAGCGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGAGGCCGCGGCATTGCAGGAGGAATCCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCATGTCAGCCCCTCAATGTTATAGCGCTGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAATTATCTATGGATGACACCGCAAACTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGTATTTGACATAATCGGAAACGCTAATTTTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAATGGCAATTGTTAATATTAACGTGTCGGTGTGTTCCCCGCGCCAGCNNNNNNNNNNNNNCCAGCGGGGATAAACCGAGCCAGTCCGCATCTCGCCAAAAACCGTTAAC # Right flank : GCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCGGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAATTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26507-24648 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABRVG010000055.1 Klebsiella variicola strain CRN 15 S15_contig_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26506 29 100.0 32 ............................. GATCAACCACTCCATCAATCAGCCGCTGAACC 26445 29 100.0 32 ............................. ACGGTGAAGCCTTCGAGTTCAGCCAGTGACAC 26384 29 100.0 32 ............................. GCCAGGTGGTTTTTCCCCGTGCCGGGTTTGCC 26323 29 100.0 32 ............................. TAAACAATCTGTCTATCTGCTGCCTGGGTACT 26262 29 100.0 32 ............................. TCGGGTAAAAGCGAGTGGCGCGATGTGGTTAT 26201 29 100.0 32 ............................. GCCAGAAAACCCCACTGCCACCCCGCTGGCAT 26140 29 100.0 32 ............................. CGATACACACTGCTGAAACACACCCGAGAAAT 26079 29 100.0 32 ............................. AGATCGGCGAGATGCACACGCTGGACTTTATC 26018 29 100.0 32 ............................. TTTTCGCGCTGCAGGGGGATGCCGTGGATCAG 25957 29 100.0 32 ............................. AATACAGCATTGTCTCTATCGGCGGACAGATC 25896 29 100.0 32 ............................. GTTATCGAAATCACTCACCGCCGTCACCGTTA 25835 29 100.0 32 ............................. CACTTTGGAATATCACCCAACCCATTGTACAC 25774 29 100.0 32 ............................. CTGCACCGAGATCGCCGCGCGCCTGGGAAAAG 25713 29 100.0 32 ............................. CGCGATCGCACTCATCGGCCAAATGACCTTTA 25652 29 100.0 32 ............................. GTTGACCTGTCGTCGGCAACCATCGAGCCGAT 25591 29 100.0 32 ............................. AAACTCCACCGCGTAGTTGCAGGTATTAATGC 25530 29 100.0 32 ............................. GCCTGCTGTCGCGAAAGGTTTCGCATATCACC 25469 29 100.0 32 ............................. TAGTAGGGTGGTGATCCGTCTTGCTGTTCGAA 25408 29 100.0 32 ............................. ACGGCGATGCAGCAAACGTTCAAATAAATTCA 25347 29 100.0 32 ............................. CAGGCTCTACGGCCTTAAGAGTCCCAAGGTAG 25286 29 100.0 32 ............................. GCCATCGTTGCTTGTGCGTCTAATGGTTAATT 25225 29 100.0 32 ............................. ATACGCCAGGTTGCCGGCCGGATCATCCTCCC 25164 29 100.0 32 ............................. TCTGCCATTGAATTCGCCGAGCCATGGCTTCC 25103 29 100.0 32 ............................. ATCAAATGGTTGTTCCTCCCACCAATCAAGAA 25042 29 100.0 32 ............................. ACTGTGAGGCTCTATGGCGATATCAGGGTGGA 24981 29 100.0 32 ............................. TCGGTATGCGATGTTCGTCAATACTCAGCGAG 24920 29 100.0 32 ............................. AGGAGGCCGCGGCATTGCAGGAGGAATCCGAA 24859 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 24798 29 100.0 32 ............................. GAAATTATCTATGGATGACACCGCAAACTACA 24737 29 100.0 32 ............................. TATTTGACATAATCGGAAACGCTAATTTTGAA 24676 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGATGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : TAAATGGCAATTGTTAATATTAACGTGTCGGTGTGTTCCCCGCGCCAGCNNNNNNNNNNNNNCCAGCGGGGATAAACCGAGCCAGTCCGCATCTCGCCAAAAACCGTTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCCTTTTTGATAGTGCAACTCAGGTTTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATGCTGCATCCGGTGGTTGCGCGAAAAAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGTAACCATGAATCGCAAGGTCACCACCAGGACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGGGCAGGTTACAATGCGCATGGGTGCTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTGCGACATCGCGCCAGGTATTAATCACGGGTGTTCCCCGCGCCAGCGGGGATAAACCATCGACGATGTTCTGCGTGATGGTGATGTATGCGTGTTCCCCGCATTCACGGGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //