Array 1 49558-49336 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PKIY01000005.1 Lactobacillus crispatus strain UMB0803 .16933_8_41.5, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     49557	    36	  97.2	    30	..........A.........................	CCGTGAAAACGGCGTTTACATGCGTAAGAC	
     49491	    36	 100.0	    17	....................................	TATTAGCTTTTGCGGCG             	Deletion [49439]
     49438	    35	  83.3	    30	..ACC.A.C....-......................	CCACTATCGCGCCTGGAATACCTGTTTTCT	TGC [49430]
     49370	    35	  80.6	     0	..........A...........-..G.AG.C...A.	|                             	
==========	======	======	======	====================================	==============================	==================
         4	    36	  90.3	    26	GTTTTAGATGGTTGTTAGATCAATGAGGTTTAGATC	                              	       

# Left flank :   CAAGCGCAAAGCTAAGCCTAAGGCAGAGTTTCCAACTGAACAGTCGCTTGATGCTTTTATTGGCATTCAGGCAATGAGCTACAATGACCGTTATTTCAATCGAATTCATAAATGCTTTGGTCAGGTTCAGGACACCTTAGAATCCTACTTTGATTAAATAAATAATTAAAAAATCAATTTACGAGAAAGATCTATTTACACAAAAGATTTGACAGTTTCATGTTAACACCATATGCTATAATTGAAACAGTTCTTAAGATTCATCAAGAATATAATCTTGATAGTATTCCCGTGTTTTGTAATGTAGCTCATTACCTTGATGAAACACAGTTAAAAGAACTTAGTAAGATTGTTAGACAACTTAAATTGAAAATTATTTTAATTGAATTCACAGATAAGAAATATGGGGTAGCAGTCAAGGATGCTCAAGTTGCATATATTGATCGAGATCTTGTTGATTGGTATTAGACAATTGATTAAAAAGATATTATGAAATATCG
# Right flank :  AGTAATATGCATAAATTTACAAATATTTTTCTGTAAATAAAAATCGCTCTAGAGAAACTCTAGAACGATTTTTGGACATACTTGATCTTAGTATCTATTATTACTTAGCGTAATCATCAATACCCAAGTGCTCCAAAATAAGTGCGGCAGTTTCTTCAATGGAGCGGTGAGCAACATTAATTACATAGCAACCTAATTTCTTATAAAGTGCTTGTGCTGATTCAAGCTCCTTGTTGATTGAATCCATATTAGAATAAGTAGTATCAGGATTCAAACCATAAGCGATCATTCTTTGACGTCTGATTTCGTTCAATACAGATGGATCGTTAGTCAAGCCAATAATCTTCTTAGGATCAATTTCGTAGATTTCTTTTGGAATGTGAGTTTCAGGAACAAGTGGTAAATTAGCTACCTTTAAGTTCTTATTGGCTAAGAACAAAGAAAGTGGAGTCTTAGAAGTTCTTGATACCCCAAGTAAAACAACGTCAGCTTCCAAGAAA

# Questionable array : NO	 Score: 4.51
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.51, 5:0, 6:0.25, 7:-0.54, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGGTTGTTAGATCAATGAGGTTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.57%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [15-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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