Array 1 412201-412467 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNTA02000007.1 Vibrio parahaemolyticus strain CFSAN007443 VP11_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 412201 28 100.0 32 ............................ GTAGAAGATGGCGTCGTTGAATGGTCGGTGAA 412261 28 100.0 32 ............................ TTCGAATTCGTCATCCAGCAACCCAAGTACAT 412321 28 100.0 32 ............................ ACTCTGCTTGATTTTCTGGCTGGAGTTGGTGC 412381 28 92.9 32 A..........T................ ACAAAACAAAGTTGTACACTGTTGTCTACCGT 412441 27 85.7 0 ....................A.-T...C | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACCGCCGCATAGGCAGCTGATAAT # Left flank : CTGAAATGACAGCGCTTAGATACTTCAGTATATCGGAGTCAACAACGGTTCCTGAAGAATGCAATCTGGCAGTTTTCCGACGTAATCAAAAAATCGACCAAGCGACACCGAATGGGCAAAGAATCAGAGCTGAACGTTTGGCTAAACGAGCTATGAATAGAGGTGATTCACCTATTCGGTTTATCCCAAAAGACCACGTGTTCGAACATTATCATTCTATACCGATAACAAGTACCCAGAGTGGCAAATCATTCAGGCTAAATTTGCAATATCAACAACTTGGTACAGTTACAGATGGAGAATGGGCATTCTCAAGTTATGGACTCGCAAATCAAAAACTTAAAAGTTCTCCTGTTCCTGTGATTTGACCCATTTAATATTCATATTCGATAATTCCTTGATTTTAAACTAGAAAAACAGTTTTAGAAAATAAAAGGTATTTTTGTAATTTGTCAATTAACAGATTGATAAACATACACTATATTTATATTGAACTTAGG # Right flank : CTCACAAATAGTCTTTTAAAGGCTGTTTGCTTTGCCAATAAATGAGGATTATAATCCTCACTACTACTGTAAAAGTAGCTGATAAAAAACGAACCACATTCATTCGAATTCAAGATCAATTACTGCTGAATAAGTAGATATTTATGAGGCTTTGCTATTTTCTATGGTAAAAGCTCTCGCACATCACACTTGAGTACTTCTGCCAGTTGGTAGACTTTTTCAAGTGTGATGTTCACTTCCCCACGTTCAATTCTTCCTATATAGCTTCTGTCAATATCAGCCTGCAGGGCTAATTGATCCTGAGAAACTCCCATATCTTTTCGCTTTCCACGCAAGTTCGCGCCAAAGCGCTTTGCTAAGTCTTTCATTTAAAACGTACATTAAAAAGAAAGACTATCTAATCTTGATGCACACATTACCACGGACTATAATCCGCATTTCGTTTTATATGTCCCCCCTGTACAGAGAGTTAATTCGTGTCTCAAGGCTTTACTATTCAC # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCATAGGCAGCTGATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //