Array 1 22568-21684 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWBU01000316.1 Streptomyces albulus strain B-3066 B3066_ACTTGA_L001_R1_001_(paired)_contig_44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================== ================== 22567 29 83.3 94 ..........-............CAT...T TCGCGACGCTGAAGGGGTATGGGGCGCTGTGTCCGTTTCGGTGAAGCTGGTGTGTGGATCGGGTAGGGGCCCATAGACTCGCTGGTCAGGAAGG C [22550] 22443 30 96.7 31 .............................T GGGCGAACACGCCCATCATCTGGCGCATGGC 22382 30 96.7 31 .............................G CAGAGGCTGCCGAGGCGGAGCAGTGCCCCAA 22321 30 100.0 31 .............................. GCCGTGAGCACCAAGACCCGCACCCGCCGCA 22260 30 96.7 31 .............................A ACGAAAACAGCAACTTCAGCCAGCCCGAGTC 22199 30 93.3 31 .............G...............G AGCACCAGGCCATGGGGGCCTCCAGGCGTGT 22138 30 96.7 31 .............................T GCGGCAGGCGCAGGGCGTCGAACTCGCCTAG 22077 30 90.0 31 .........A.........A.........G AACTGGCCACGGAGATGTCCGTGGTGCCCGT 22016 30 100.0 31 .............................. CGCACGCCACGGCCAGGGACCACTCGCCGTG 21955 30 100.0 31 .............................. GGCGGACCAGGTACACGCCCTCTTCGAGCTG 21894 30 96.7 31 .............................A TGACGCCCGGTCGGGAATACAAGGTTCAGGT 21833 30 100.0 31 .............................. ATCGCGATCCCCTTCCCCGTACGGTCCAGCG 21772 30 93.3 31 .........................T...T TCACCTTGGCCGTGTACTGCGGTTCGGTGGT 21711 28 80.0 0 ......T.........--.....C.C...G | ========== ====== ====== ====== ============================== ============================================================================================== ================== 14 30 94.5 36 CTGCTCCCCGCGCACGCGGGGATGGACCCC # Left flank : CGCGAGCTGATCCACCTGACAGGCGAAGGCTGGCGTTGCCTTACCAATGTCGTGCACGCCAGACAGCCACACGACCAGGCGCCGAGCATCATCCTCACCACCCGGCAAACCCTCAGCGATCAACCGACGGACACCAGCAGGCAGCCAGTCATCCCACAGCAAGCCCGCCACAGCCGCACTGTCATCCATATGCCGCCACAGCGGCAACCAGCCGTCACAGTCGCGATCATGCTTAGCCCACACCGAACAAGCCGCGACCCCGAGCCGACTCCCCAGCCCAGAACGACTCCCCCCACCGTCTGCCATAAAAAGATCAATACACGGGCAGCACACCCGTTGACGGCAGTATGCGAAAACTTCGTACAGATCATGCAGGCCGGCATAGGCATATATCCGGCGAGGGCGAGGACGGACCCAGGAACGCGCAGTGCCCCTCTCATCCACGCCCTACTTCCCATGCGGAGACAGTCCCCGCGACCACCAGTACGCCGACCCAGGCC # Right flank : ATCGACATCGCAGCGCGCCAGCTCGCCGAGTGCCCAGGAACCCATGCCGGCGCGCGAAGGGTCGTTCAACTACTGGCACCAACGCAGCGTCCCGAGGACGTACTGGCCAGTACGAGGACGCTCCCTGCTGAGAAGCTCCCCGGCCTGGTAACAGGTGTTACCATTCGGTCATGGCGAAAACGCAAATTGGCGCCCGGGTGGATGCGGAGATCGCGGAGCTGGCTCGTAAGCGGGCTGCGGACCGTGGTATGTCGGTGGGCGACTACCTAGCTCATCTGGTGCTTGAGGACGCTAGCGGAATTCGGGCTCGGGCGATGGGAGCGGCGGAGCGCTTCCTCGGCGAGCACCAGGCTCTCTTTGATGAGGCTGAGGAGTCGGAGCGGACTGGGAAGGGTCGGCAGGCTGCCTGATGATCTTGCACATCGATGTGCCGTGGATCCTGCAAGTTGCTGAGATCGCTGGGGCTGGTGACCCGGCTCCGGATGACTACGGCGTTCCGG # Questionable array : NO Score: 5.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.37, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 32083-32843 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWBU01000316.1 Streptomyces albulus strain B-3066 B3066_ACTTGA_L001_R1_001_(paired)_contig_44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32083 29 100.0 32 ............................. GTGATGCCCGTCGCGGCGACGGCCTCAGCTGT 32144 29 100.0 32 ............................. CGGTAGATGTTGCCGGAATGCCGACTGTTGTC 32205 29 100.0 32 ............................. GCGTCCCGGTCGCCAACCCCGGTGAACGGCTC 32266 29 100.0 32 ............................. TTGGCGCTGCGGATGACGCTGGTGGTGGCGGT 32327 29 100.0 32 ............................. AAGGCACGCGCGGACAAGCTGCCCAAGATGTT 32388 29 100.0 32 ............................. AGCCGACACGACCTGCTTCCGCAGACGGGCCG 32449 29 100.0 32 ............................. TCTGGCGGCTGGGAGGTCGTCGACCGGGACAT 32510 29 100.0 32 ............................. GTGGTCTGCGCCTCCTGGGCGCCGTCGTCGGT 32571 29 100.0 32 ............................. GGTGCTGTTCGCGGGGGGAAAGTCCACCCTCA 32632 29 100.0 32 ............................. GCGGGCATGGACCGTGGCCGCCAGGTGCTCAC 32693 29 100.0 32 ............................. GGGTCGCCGGTCAGTCCCTCGCTCATTTCTTG 32754 29 100.0 32 ............................. GGTGCGGCGGGGTCCGGGTCGTAGTCGGTGAG 32815 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 100.0 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : TGTCACCGTCCAGACGGATGGCGGCCTAGAAGTGGCCGCCGGCTTCAATCACGCAGAGCAGGCATACACCTGGTGACCATCATCGTGCTTACCAACTGTCCAGTCGGCCTACGTGGCTACCTCACCCGCTGGCTCCTGGAAATCTCGGCCGGAGTGTTCATCGGCAACCCTTCCGCAAGGATCCGCGACATCATGTGGACCGAGGTCCAGCAATACGCGGGGCAAGGCAGAGCACTTCTGGCGTACACCACCACTAACGAACAGGGGTATGCGTTCCGAACGCACGAACACTCATGGAACCCCACCGACCACGAAGGTCTCATGCTGATCCACCGCCCGGAGGCCCCCCAACCAGTGAGCGCTGCACCAAAGGCCGGCTGGAGCAGGACGGCTAAGCGACGTCGATATGGTGGCGGTTAGCGGTTATGTGGAAAATGACCGAATCGCTGAAGCTGGTAAGAAACCGCTTCGCCTGTACCTAACGCTGCTGGTCACGCAGT # Right flank : CCTCCGGGAGGCGTTCGCCTGCGGATCCACGTCCCGCTCCCCGCGCACGCGGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCACGCGGGGATGGTCCCGTCGAAGGCCGCACGCCGCTGCCCGGCCCGTCCGGCTCCACGCGCACGCGCGGATGGTCCCCTAGCTCAGCGCTACTGTGACCCTGTCGTCGACCACGCCATCAACGTCACCCTGCCCGACCTACACTCTGGCCGCGGCTGCTGCACCTCGCCGCCGGTGGCGGTGAGCATCCGGACACGGACGCCGGGGGCGAAACCGCCTGCGACGGGCTCGGCCGGGGTGGTGAGCTGGAGATGGTCGGCGATGCGGTGGCGGAGGAGGGCTGGGAGGTCATCTCAGGTTCGGGTGGTCACGTCAATCTGCAGGTGATCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //